| Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
|---|---|
| Accession | NC_007705 |
| Length | 4,940,217 |
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The map label for this gene is mtgA [H]
Identifier: 84623366
GI number: 84623366
Start: 1883388
End: 1884125
Strand: Direct
Name: mtgA [H]
Synonym: XOO_1709
Alternate gene names: 84623366
Gene position: 1883388-1884125 (Clockwise)
Preceding gene: 84623362
Following gene: 84623367
Centisome position: 38.12
GC content: 64.23
Gene sequence:
>738_bases GTGGGGACGGATGTATGGGATGACAAGCAAGCTGCGCCACCGCGGCGCAGGCGCTGTCTGCGCTGGGTCTTGGCGGCACC GCTGCTGTTTGCCGCGGCGAGCGTGCTGCAGGTGCTGTTCTTGCGGGTGGTCGATCCACCGATCAGCAGCATGATGGTGG GGCGTTATCTGGAAGCCTGGGGCGAGGGCGACTGGAGTTTTTCGCTGCATCAGCGATGGCGTGATTACGACAAGATCGCC GCGAGCCTGCCGATTTCGGTGGTAGCTGCGGAGGATCAGCAATTCCCGATGCACCACGGTTTCGATCTGCAAGCGATCGA AAAGGCGCGCGATCATAATGCCCGCGGCGGCCGCGTGCGTGGCGCCAGCACCATCAGCCAGCAGGTCGCCAAGAATGTAT TTCTGTGGCAGGGCCGCAGTTGGGTGCGTAAGGGCCTGGAGGCCTGGTACACGGTCTTGATCGAGCTGTTCTGGCCCAAG CAGCGCATTCTGGAGATGTATCTCAACGTGGCCGAATTCGGCGACGGTGTGTACGGCGCGCAGGCGGCTGCCCAGCAGTT CTGGGGCAAGGATGCGGCAGGTTTGTCGCCGACCGAATCGGCGCGCCTGGCGGCGGTGTTGCCATCGCCACGGCATTACG ACGCGCGCAGTCCCGGTGCATTCGTGCAGCGGCGTACCATGTGGATCCAGCGGCAGGCGCGCCAATTGGGCGGCCCTGCC TACTTGCCGGCACCATGA
Upstream 100 bases:
>100_bases CGGGAAAGCTGATCGTGATCGGTCATGGAAACATCGGACGTAAGGGACGCGTGTTGCCGGATAATGCAGCAGGCATCGGG ATTGAAGGTCTTAGCGAACA
Downstream 100 bases:
>100_bases GGGTGAGCACGATCGATACCGTCCAACTACCGGTCTCCCCTGAGCACCTGACCGTGGTCATCGCGGCCTTCAACGAAGAA ACCAGCATTCCCCTTCTGCA
Product: monofunctional biosynthetic peptidoglycan transglycosylase
Products: NA
Alternate protein names: Monofunctional TGase [H]
Number of amino acids: Translated: 245; Mature: 244
Protein sequence:
>245_residues MGTDVWDDKQAAPPRRRRCLRWVLAAPLLFAAASVLQVLFLRVVDPPISSMMVGRYLEAWGEGDWSFSLHQRWRDYDKIA ASLPISVVAAEDQQFPMHHGFDLQAIEKARDHNARGGRVRGASTISQQVAKNVFLWQGRSWVRKGLEAWYTVLIELFWPK QRILEMYLNVAEFGDGVYGAQAAAQQFWGKDAAGLSPTESARLAAVLPSPRHYDARSPGAFVQRRTMWIQRQARQLGGPA YLPAP
Sequences:
>Translated_245_residues MGTDVWDDKQAAPPRRRRCLRWVLAAPLLFAAASVLQVLFLRVVDPPISSMMVGRYLEAWGEGDWSFSLHQRWRDYDKIA ASLPISVVAAEDQQFPMHHGFDLQAIEKARDHNARGGRVRGASTISQQVAKNVFLWQGRSWVRKGLEAWYTVLIELFWPK QRILEMYLNVAEFGDGVYGAQAAAQQFWGKDAAGLSPTESARLAAVLPSPRHYDARSPGAFVQRRTMWIQRQARQLGGPA YLPAP >Mature_244_residues GTDVWDDKQAAPPRRRRCLRWVLAAPLLFAAASVLQVLFLRVVDPPISSMMVGRYLEAWGEGDWSFSLHQRWRDYDKIAA SLPISVVAAEDQQFPMHHGFDLQAIEKARDHNARGGRVRGASTISQQVAKNVFLWQGRSWVRKGLEAWYTVLIELFWPKQ RILEMYLNVAEFGDGVYGAQAAAQQFWGKDAAGLSPTESARLAAVLPSPRHYDARSPGAFVQRRTMWIQRQARQLGGPAY LPAP
Specific function: Cell wall formation [H]
COG id: COG0744
COG function: function code M; Membrane carboxypeptidase (penicillin-binding protein)
Gene ontology:
Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyltransferase 51 family [H]
Homologues:
Organism=Escherichia coli, GI1789601, Length=228, Percent_Identity=48.6842105263158, Blast_Score=213, Evalue=1e-56, Organism=Escherichia coli, GI87082258, Length=139, Percent_Identity=36.6906474820144, Blast_Score=84, Evalue=1e-17, Organism=Escherichia coli, GI1786343, Length=147, Percent_Identity=34.0136054421769, Blast_Score=79, Evalue=4e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001264 - InterPro: IPR011812 [H]
Pfam domain/function: PF00912 Transgly [H]
EC number: 2.4.2.- [C]
Molecular weight: Translated: 27658; Mature: 27527
Theoretical pI: Translated: 10.29; Mature: 10.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGTDVWDDKQAAPPRRRRCLRWVLAAPLLFAAASVLQVLFLRVVDPPISSMMVGRYLEAW CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH GEGDWSFSLHQRWRDYDKIAASLPISVVAAEDQQFPMHHGFDLQAIEKARDHNARGGRVR CCCCCCCHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCHHHHHHHHCCCCCCCCCC GASTISQQVAKNVFLWQGRSWVRKGLEAWYTVLIELFWPKQRILEMYLNVAEFGDGVYGA CHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHH QAAAQQFWGKDAAGLSPTESARLAAVLPSPRHYDARSPGAFVQRRTMWIQRQARQLGGPA HHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCC YLPAP CCCCC >Mature Secondary Structure GTDVWDDKQAAPPRRRRCLRWVLAAPLLFAAASVLQVLFLRVVDPPISSMMVGRYLEAW CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH GEGDWSFSLHQRWRDYDKIAASLPISVVAAEDQQFPMHHGFDLQAIEKARDHNARGGRVR CCCCCCCHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCHHHHHHHHCCCCCCCCCC GASTISQQVAKNVFLWQGRSWVRKGLEAWYTVLIELFWPKQRILEMYLNVAEFGDGVYGA CHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHH QAAAQQFWGKDAAGLSPTESARLAAVLPSPRHYDARSPGAFVQRRTMWIQRQARQLGGPA HHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCC YLPAP CCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA