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The map label for this gene is ybbJ [H]

Identifier: 84623353

GI number: 84623353

Start: 1865340

End: 1865918

Strand: Direct

Name: ybbJ [H]

Synonym: XOO_1696

Alternate gene names: 84623353

Gene position: 1865340-1865918 (Clockwise)

Preceding gene: 84623352

Following gene: 84623354

Centisome position: 37.76

GC content: 66.15

Gene sequence:

>579_bases
ATGCGCTGGGATGTGGCGGTCTGGGCAGTGCTGGCGCTGCTGCTGATTGCGGCCGAGACCTTGGTGCCGGGTGCCTTCCT
GCTGTGGATGGGGATCGCTGCCGCAGTGGTGTGCGTGTTGGTGCTGGTGTTGCCGGACATCGCGTTGCTGGTGCAGATCG
TGGTGTTCGTGGTGCTCAGCTTCGTCTCGGTGCAGGTGTATCGCACCTGGTGTCGCGGCAAGGGCCGTGAGAGCGATCGC
CCGTTGCTCAATCGACGTGCCGAGCAGGTGATCGGCCGTCGCGTGTTGCTCGATCAGGCCATCGACGATGGTCGCGGGCG
CGTCAAGGTCGACGATGCGTTCTGGGTGGTCGCCGGTCCCGATCTGCCGGCCGGCACGCCGGTGCGCATCGTCGGTGTCG
ATGGCAGACCTTGCTGGTGCAGCCGGTCAGCTGACGTCCGCGGGCAGGGCACATGTTGCGCTGCCAATGTCCGCATTGTT
GCAGCGCGGCGTAGCATCGCGCTGCGTCACTGTTCTCCAATCAGCGTAATCGCGCTGCTGCGCGCACGCCGTTCCCCAGG
CGCGGCAGGACGGGGATAA

Upstream 100 bases:

>100_bases
GATCGCCGGCATCGCCGCGTTGGCCAAGGAAGCGATTGGCAAGCCCGACGCACCTGCCGTGCGCGTGCCGCCGTTACCGC
CGCGCGCAGGAGGCTGAGCG

Downstream 100 bases:

>100_bases
TGAGCGTCTTTCCTTGGACCGGCGCTCATGACCCAGAAGACCATCCTCAACGACACCCATCGTGCGCTCGGCGCCAAAAT
GGTCGACTTCGGCGGTTGGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 192; Mature: 192

Protein sequence:

>192_residues
MRWDVAVWAVLALLLIAAETLVPGAFLLWMGIAAAVVCVLVLVLPDIALLVQIVVFVVLSFVSVQVYRTWCRGKGRESDR
PLLNRRAEQVIGRRVLLDQAIDDGRGRVKVDDAFWVVAGPDLPAGTPVRIVGVDGRPCWCSRSADVRGQGTCCAANVRIV
AARRSIALRHCSPISVIALLRARRSPGAAGRG

Sequences:

>Translated_192_residues
MRWDVAVWAVLALLLIAAETLVPGAFLLWMGIAAAVVCVLVLVLPDIALLVQIVVFVVLSFVSVQVYRTWCRGKGRESDR
PLLNRRAEQVIGRRVLLDQAIDDGRGRVKVDDAFWVVAGPDLPAGTPVRIVGVDGRPCWCSRSADVRGQGTCCAANVRIV
AARRSIALRHCSPISVIALLRARRSPGAAGRG
>Mature_192_residues
MRWDVAVWAVLALLLIAAETLVPGAFLLWMGIAAAVVCVLVLVLPDIALLVQIVVFVVLSFVSVQVYRTWCRGKGRESDR
PLLNRRAEQVIGRRVLLDQAIDDGRGRVKVDDAFWVVAGPDLPAGTPVRIVGVDGRPCWCSRSADVRGQGTCCAANVRIV
AARRSIALRHCSPISVIALLRARRSPGAAGRG

Specific function: Unknown

COG id: COG1585

COG function: function code OU; Membrane protein implicated in regulation of membrane protease activity

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To M.jannaschii MJ0826 [H]

Homologues:

Organism=Escherichia coli, GI145693099, Length=131, Percent_Identity=35.8778625954198, Blast_Score=75, Evalue=4e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012340
- InterPro:   IPR002810 [H]

Pfam domain/function: PF01957 NfeD [H]

EC number: NA

Molecular weight: Translated: 20727; Mature: 20727

Theoretical pI: Translated: 11.07; Mature: 11.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.6 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
3.6 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRWDVAVWAVLALLLIAAETLVPGAFLLWMGIAAAVVCVLVLVLPDIALLVQIVVFVVLS
CCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FVSVQVYRTWCRGKGRESDRPLLNRRAEQVIGRRVLLDQAIDDGRGRVKVDDAFWVVAGP
HHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCEEEEEECC
DLPAGTPVRIVGVDGRPCWCSRSADVRGQGTCCAANVRIVAARRSIALRHCSPISVIALL
CCCCCCCEEEEECCCCCCEECCCCCCCCCCCEEECCEEEEEEHHHHHHHCCCHHHHHHHH
RARRSPGAAGRG
HHCCCCCCCCCC
>Mature Secondary Structure
MRWDVAVWAVLALLLIAAETLVPGAFLLWMGIAAAVVCVLVLVLPDIALLVQIVVFVVLS
CCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FVSVQVYRTWCRGKGRESDRPLLNRRAEQVIGRRVLLDQAIDDGRGRVKVDDAFWVVAGP
HHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCEEEEEECC
DLPAGTPVRIVGVDGRPCWCSRSADVRGQGTCCAANVRIVAARRSIALRHCSPISVIALL
CCCCCCCEEEEECCCCCCEECCCCCCCCCCCEEECCEEEEEEHHHHHHHCCCHHHHHHHH
RARRSPGAAGRG
HHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]