Click here to switch to the map view.

The map label for this gene is nudE [H]

Identifier: 84623348

GI number: 84623348

Start: 1861132

End: 1861680

Strand: Direct

Name: nudE [H]

Synonym: XOO_1691

Alternate gene names: 84623348

Gene position: 1861132-1861680 (Clockwise)

Preceding gene: 84623345

Following gene: 84623349

Centisome position: 37.67

GC content: 65.57

Gene sequence:

>549_bases
ATGAGCTCGCGCCTGCCGACCATCCACAAAATCACCGATCTGGGCGACGGGCCGTTCCGTCGGCAGCGGCTGGATCTGGA
ATTTTCCAACGGGCAGCGCCGCATCTACGAACGTCAACTCAGCCAAGGCCACGGGGCCGTGGTGGTGGTGCCGATGCTCG
ATGCGCAGACCGTGCTGCTGGTGCGCGAATACGCCGCCGGCGTGCATCGCTACGAGCTGGGTCTGGTCAAGGGCCGCATC
GATGCGGGCGAAACGCCCGAGCAGGCCGCCGACCGCGAGCTCAAGGAAGAAGCCGGCTACGGCGCACGCCAGGTCCAGGT
GCTGCGCGCGATGACGCTCGCTCCCACTTATATGAGTCACCAATCCTGGTTGGTACTGGCACGCGACCTCTACCCCGAGC
GCCTGGTCGGCGACGAGCCGGAAGAGATGGACGTGGTGCCGTGGCCGATCGCACGCCTGGACGAATTGATGCTGCGCGAA
GATTTCTCCGAAGGCCGCTCGCTGGCCGCCTTGTTCATTGCGCGCGAGTGGCTGGAGCGCAACCCATGA

Upstream 100 bases:

>100_bases
GCAGTTTGTGCGGCTGCAGGGTCTGCTAGGATTTCGGGTTCATGGACATGTCGATGCATCTGCCTATTCTATCGGCCCGC
CTTGCGGCTGCGTGCGACGC

Downstream 100 bases:

>100_bases
TCCGCATTCCGATGGAGCTGCGCGAAACCGTGATTGCCATCGCGTGCGATGCCGGCGCCGCCATCATGGAGGTCTATGCG
CAGGACTTCGCGGTGGAGCT

Product: ADP-ribose diphosphatase NudE

Products: AMP; D-Ribose 5- Phosphate. [C]

Alternate protein names: NA

Number of amino acids: Translated: 182; Mature: 181

Protein sequence:

>182_residues
MSSRLPTIHKITDLGDGPFRRQRLDLEFSNGQRRIYERQLSQGHGAVVVVPMLDAQTVLLVREYAAGVHRYELGLVKGRI
DAGETPEQAADRELKEEAGYGARQVQVLRAMTLAPTYMSHQSWLVLARDLYPERLVGDEPEEMDVVPWPIARLDELMLRE
DFSEGRSLAALFIAREWLERNP

Sequences:

>Translated_182_residues
MSSRLPTIHKITDLGDGPFRRQRLDLEFSNGQRRIYERQLSQGHGAVVVVPMLDAQTVLLVREYAAGVHRYELGLVKGRI
DAGETPEQAADRELKEEAGYGARQVQVLRAMTLAPTYMSHQSWLVLARDLYPERLVGDEPEEMDVVPWPIARLDELMLRE
DFSEGRSLAALFIAREWLERNP
>Mature_181_residues
SSRLPTIHKITDLGDGPFRRQRLDLEFSNGQRRIYERQLSQGHGAVVVVPMLDAQTVLLVREYAAGVHRYELGLVKGRID
AGETPEQAADRELKEEAGYGARQVQVLRAMTLAPTYMSHQSWLVLARDLYPERLVGDEPEEMDVVPWPIARLDELMLRED
FSEGRSLAALFIAREWLERNP

Specific function: Active on adenosine(5')triphospho(5')adenosine (Ap3A), ADP-ribose, NADH, adenosine(5')diphospho(5')adenosine (Ap2A) [H]

COG id: COG0494

COG function: function code LR; NTP pyrophosphohydrolases including oxidative damage repair enzymes

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 nudix hydrolase domain [H]

Homologues:

Organism=Escherichia coli, GI1789800, Length=161, Percent_Identity=49.0683229813665, Blast_Score=165, Evalue=1e-42,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020084
- InterPro:   IPR000086
- InterPro:   IPR015797 [H]

Pfam domain/function: PF00293 NUDIX [H]

EC number: 3.6.1.- [C]

Molecular weight: Translated: 20783; Mature: 20652

Theoretical pI: Translated: 5.13; Mature: 5.13

Prosite motif: PS00893 NUDIX

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSRLPTIHKITDLGDGPFRRQRLDLEFSNGQRRIYERQLSQGHGAVVVVPMLDAQTVLL
CCCCCCCHHHHHCCCCCCCHHHEECEEECCCHHHHHHHHHHCCCCCEEEEECCCCHHHHH
VREYAAGVHRYELGLVKGRIDAGETPEQAADRELKEEAGYGARQVQVLRAMTLAPTYMSH
HHHHHHCHHHHHHHHEECCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHCC
QSWLVLARDLYPERLVGDEPEEMDVVPWPIARLDELMLREDFSEGRSLAALFIAREWLER
CHHEEHHHHCCHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHC
NP
CC
>Mature Secondary Structure 
SSRLPTIHKITDLGDGPFRRQRLDLEFSNGQRRIYERQLSQGHGAVVVVPMLDAQTVLL
CCCCCCHHHHHCCCCCCCHHHEECEEECCCHHHHHHHHHHCCCCCEEEEECCCCHHHHH
VREYAAGVHRYELGLVKGRIDAGETPEQAADRELKEEAGYGARQVQVLRAMTLAPTYMSH
HHHHHHCHHHHHHHHEECCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHCC
QSWLVLARDLYPERLVGDEPEEMDVVPWPIARLDELMLREDFSEGRSLAALFIAREWLER
CHHEEHHHHCCHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHC
NP
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ADP-Ribose; H2O [C]

Specific reaction: ADP-Ribose + H2O = AMP + D-Ribose 5- Phosphate. [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503; 9452430 [H]