Click here to switch to the map view.

The map label for this gene is pilH [H]

Identifier: 84623305

GI number: 84623305

Start: 1797439

End: 1797801

Strand: Direct

Name: pilH [H]

Synonym: XOO_1648

Alternate gene names: 84623305

Gene position: 1797439-1797801 (Clockwise)

Preceding gene: 84623304

Following gene: 84623306

Centisome position: 36.38

GC content: 59.23

Gene sequence:

>363_bases
ATGGCTCGAATTGTATTGATCGAGGACTCGCCCACCGACAGCGCAGTCTTCAGTCAATGGCTGGAAAAAGCAGGCCATAC
GGTCGTCGCCACCGATAACGCAGAAGAGGGACTTGAGCTGGTTCGCAGCCAGGTGCCCGATCTTGTGTTGATGGATGTGG
TGTTGCCCGGCATGAGCGGCTTCCAGGCAACGCGTGCACTTGCACGCGACCAGGCTACCAAGGACATCCCCGTGCTGCTG
GTCAGCACCAAGGGCATGGAAACCGACAGGGCCTGGGGTTTGCGACAAGGTGCCAGCGACTACATCGTCAAGCCGCCGCG
CGAAGACGATTTGATCGCGCGCATCAGACAACTGGTGCGTTGA

Upstream 100 bases:

>100_bases
TCGTCGGTTCCGAGCAATATCTGACCAAGCCGTTCACCCGTGAAGAACTATTGAGCGCAATCCGCACGTACGTCCACGCC
TGACCAGGGGGAAAGGCAAC

Downstream 100 bases:

>100_bases
TGCGCTCTCCATTCGATATTCTCGAAGACTACGAGCGTCGTAGTCTTGCGCACGCCACGCCGCTGCCGGAACGCCAGTTC
TCTGCAGATATCTGGCGCGG

Product: PilH protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 120; Mature: 119

Protein sequence:

>120_residues
MARIVLIEDSPTDSAVFSQWLEKAGHTVVATDNAEEGLELVRSQVPDLVLMDVVLPGMSGFQATRALARDQATKDIPVLL
VSTKGMETDRAWGLRQGASDYIVKPPREDDLIARIRQLVR

Sequences:

>Translated_120_residues
MARIVLIEDSPTDSAVFSQWLEKAGHTVVATDNAEEGLELVRSQVPDLVLMDVVLPGMSGFQATRALARDQATKDIPVLL
VSTKGMETDRAWGLRQGASDYIVKPPREDDLIARIRQLVR
>Mature_119_residues
ARIVLIEDSPTDSAVFSQWLEKAGHTVVATDNAEEGLELVRSQVPDLVLMDVVLPGMSGFQATRALARDQATKDIPVLLV
STKGMETDRAWGLRQGASDYIVKPPREDDLIARIRQLVR

Specific function: May be a part of a signal-transduction system that regulates twitching motility by controlling pilus function (extension and retraction) [H]

COG id: COG0784

COG function: function code T; FOG: CheY-like receiver

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1786599, Length=118, Percent_Identity=37.2881355932203, Blast_Score=86, Evalue=6e-19,
Organism=Escherichia coli, GI1788394, Length=118, Percent_Identity=34.7457627118644, Blast_Score=80, Evalue=5e-17,
Organism=Escherichia coli, GI1786784, Length=118, Percent_Identity=33.8983050847458, Blast_Score=74, Evalue=3e-15,
Organism=Escherichia coli, GI87082012, Length=118, Percent_Identity=34.7457627118644, Blast_Score=74, Evalue=3e-15,
Organism=Escherichia coli, GI1787229, Length=116, Percent_Identity=34.4827586206897, Blast_Score=73, Evalue=5e-15,
Organism=Escherichia coli, GI1789809, Length=118, Percent_Identity=35.5932203389831, Blast_Score=71, Evalue=2e-14,
Organism=Escherichia coli, GI1790860, Length=115, Percent_Identity=34.7826086956522, Blast_Score=69, Evalue=1e-13,
Organism=Escherichia coli, GI2367329, Length=120, Percent_Identity=34.1666666666667, Blast_Score=61, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR001789 [H]

Pfam domain/function: PF00072 Response_reg [H]

EC number: NA

Molecular weight: Translated: 13228; Mature: 13097

Theoretical pI: Translated: 4.69; Mature: 4.69

Prosite motif: PS50110 RESPONSE_REGULATORY

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARIVLIEDSPTDSAVFSQWLEKAGHTVVATDNAEEGLELVRSQVPDLVLMDVVLPGMSG
CCEEEEEECCCCCHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHCCCHHHHHHHHCCCCC
FQATRALARDQATKDIPVLLVSTKGMETDRAWGLRQGASDYIVKPPREDDLIARIRQLVR
HHHHHHHHHHCCCCCCCEEEEECCCCCCCHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHC
>Mature Secondary Structure 
ARIVLIEDSPTDSAVFSQWLEKAGHTVVATDNAEEGLELVRSQVPDLVLMDVVLPGMSG
CEEEEEECCCCCHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHCCCHHHHHHHHCCCCC
FQATRALARDQATKDIPVLLVSTKGMETDRAWGLRQGASDYIVKPPREDDLIARIRQLVR
HHHHHHHHHHCCCCCCCEEEEECCCCCCCHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7908398; 10984043 [H]