| Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
|---|---|
| Accession | NC_007705 |
| Length | 4,940,217 |
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The map label for this gene is yeaZ [H]
Identifier: 84623300
GI number: 84623300
Start: 1793023
End: 1793742
Strand: Direct
Name: yeaZ [H]
Synonym: XOO_1643
Alternate gene names: 84623300
Gene position: 1793023-1793742 (Clockwise)
Preceding gene: 84623299
Following gene: 84623301
Centisome position: 36.29
GC content: 71.67
Gene sequence:
>720_bases ATGAACGTCCTCGCCTTCGAGACCTCCACCGAAGCCTGTTCCGTCGCCGTGCACGTCGACGGTCGCGTGATCGAGCGCTT CGAACTGGCGCCGCGCCGCCACGCCGAACTGGCGCTGCCCTGGGCCGAGCAGCTGCTGGCCGAGGCAGGTATTACGCGCC GCCAGCTCGATGCGATTGCGGTCGGCCGTGGCCCTGGCGCGTTCACTGGCGTGCGTCTGGCGATCGGCATTGCGCAGGGC ATCGCCTTGGCGCTGGATGTGCCGGTGCTGGCCGTTTCCACGTTGCAGGTGCTGGCCCTGCGCGCGCCGGCCGAAGCGAG CCATGTACTGGCCTGCATCGATGCGCGCATGGGCGAGGTGTATGCCGGTGTCTTCGCGCGCGGTGACGACACGGTGCTGG AACTGGCGCCGGAAGTGGTCTGCGCGCCGGAAGCACTCGTGCTGCCCGATACGGCGCAGCGCATGGCCGCTGTCGGCACC GGTCTGGCGGCTGCCGATGCGCTGCTGCAACAGCGCTTTGCGACGCGCCTGACCAGTGTCGATGCCGCCGCGCTGCCGCG TGCCGCCGATCTGCTCACGCTCGCGGTGCCGGCCCTGCGGCGCGGCCAAGGCGTGGCGCCGGAGCGGGTGGAGCCGGCCT ACCTGCGCGACAACGTCGCGCTCACCCTGGTCGAGCAACAGGCCGCCCGCGCCGCGAAGGCGGCCGGCGCATCGCCATGA
Upstream 100 bases:
>100_bases GCGTTTTTTGGTGTTGCAGAGGCGGTGGGCGACAATGGCGTACTCGCGTTGCCGTTCGGCGATGATCGATCTTCTTATTT TTTCTGACTGCGGCCCTGCC
Downstream 100 bases:
>100_bases CCGATGCTGCCCGGCATGCGCGTTTTCGCGGTTGCCTGCTCGGTCTGGCGGTGGGCGATGCGCTAGGCACCACGCTCGAA TTCTGCGCGCTGGGCAGCTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 239; Mature: 239
Protein sequence:
>239_residues MNVLAFETSTEACSVAVHVDGRVIERFELAPRRHAELALPWAEQLLAEAGITRRQLDAIAVGRGPGAFTGVRLAIGIAQG IALALDVPVLAVSTLQVLALRAPAEASHVLACIDARMGEVYAGVFARGDDTVLELAPEVVCAPEALVLPDTAQRMAAVGT GLAAADALLQQRFATRLTSVDAAALPRAADLLTLAVPALRRGQGVAPERVEPAYLRDNVALTLVEQQAARAAKAAGASP
Sequences:
>Translated_239_residues MNVLAFETSTEACSVAVHVDGRVIERFELAPRRHAELALPWAEQLLAEAGITRRQLDAIAVGRGPGAFTGVRLAIGIAQG IALALDVPVLAVSTLQVLALRAPAEASHVLACIDARMGEVYAGVFARGDDTVLELAPEVVCAPEALVLPDTAQRMAAVGT GLAAADALLQQRFATRLTSVDAAALPRAADLLTLAVPALRRGQGVAPERVEPAYLRDNVALTLVEQQAARAAKAAGASP >Mature_239_residues MNVLAFETSTEACSVAVHVDGRVIERFELAPRRHAELALPWAEQLLAEAGITRRQLDAIAVGRGPGAFTGVRLAIGIAQG IALALDVPVLAVSTLQVLALRAPAEASHVLACIDARMGEVYAGVFARGDDTVLELAPEVVCAPEALVLPDTAQRMAAVGT GLAAADALLQQRFATRLTSVDAAALPRAADLLTLAVPALRRGQGVAPERVEPAYLRDNVALTLVEQQAARAAKAAGASP
Specific function: Unknown
COG id: COG1214
COG function: function code O; Inactive homolog of metal-dependent proteases, putative molecular chaperone
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M22 family [H]
Homologues:
Organism=Escherichia coli, GI1788109, Length=229, Percent_Identity=41.9213973799127, Blast_Score=154, Evalue=3e-39,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR022496 - InterPro: IPR000905 [H]
Pfam domain/function: PF00814 Peptidase_M22 [H]
EC number: NA
Molecular weight: Translated: 24802; Mature: 24802
Theoretical pI: Translated: 5.09; Mature: 5.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNVLAFETSTEACSVAVHVDGRVIERFELAPRRHAELALPWAEQLLAEAGITRRQLDAIA CCEEEEECCCCEEEEEEEECCHHHHHHHCCCCCCCEEECCHHHHHHHHCCCCHHHHHEEE VGRGPGAFTGVRLAIGIAQGIALALDVPVLAVSTLQVLALRAPAEASHVLACIDARMGEV ECCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH YAGVFARGDDTVLELAPEVVCAPEALVLPDTAQRMAAVGTGLAAADALLQQRFATRLTSV HHHHEECCCCHHHHHCCHHEECCCEEECCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHC DAAALPRAADLLTLAVPALRRGQGVAPERVEPAYLRDNVALTLVEQQAARAAKAAGASP CHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHCCCEEEEEHHHHHHHHHHHCCCCC >Mature Secondary Structure MNVLAFETSTEACSVAVHVDGRVIERFELAPRRHAELALPWAEQLLAEAGITRRQLDAIA CCEEEEECCCCEEEEEEEECCHHHHHHHCCCCCCCEEECCHHHHHHHHCCCCHHHHHEEE VGRGPGAFTGVRLAIGIAQGIALALDVPVLAVSTLQVLALRAPAEASHVLACIDARMGEV ECCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH YAGVFARGDDTVLELAPEVVCAPEALVLPDTAQRMAAVGTGLAAADALLQQRFATRLTSV HHHHEECCCCHHHHHCCHHEECCCEEECCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHC DAAALPRAADLLTLAVPALRRGQGVAPERVEPAYLRDNVALTLVEQQAARAAKAAGASP CHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHCCCEEEEEHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9097040; 9278503 [H]