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The map label for this gene is hrpA [H]

Identifier: 84623281

GI number: 84623281

Start: 1765939

End: 1770060

Strand: Direct

Name: hrpA [H]

Synonym: XOO_1624

Alternate gene names: 84623281

Gene position: 1765939-1770060 (Clockwise)

Preceding gene: 84623275

Following gene: 84623287

Centisome position: 35.75

GC content: 66.42

Gene sequence:

>4122_bases
ATGAGCGCTATCGACTCCGACCTTGCCAACACCTTGCGTGAGCGCCGCCGCGCCGTGGATGGCGCGATGAGCCACGACCG
TGGCCGCTTGCTGGGCCTATGGTCGCGCTGGCAGGGCAAGCCGGGCAACCCGCAGGTACGCGATGCGTTCGAGCAGGCGC
TGGCGGCATCGCAGGCGCAGCGCCAGGCGCGGGCCGAGCAGCAGCCGGCCATCACGCTGGACAACCAATTGCCGATCGCG
CGCGAGGCCGAGCGTATCATCGCGTTGATCCGTGATCATCAAGTGGTGGTCATCGCCGGCGAAACCGGCTCGGGCAAGAC
CACCCAGCTGCCCAAGCTGTGTCTGGCGGCAGGGCGCGGGGCCGCCGGGATGATCGGTTGCACTCAGCCGCGCCGGATCG
CCGCGCGTGCGGTGGCTGCGCGCGTGGCGGAAGAGTTGAAGACGCCACTAGGTACCATCGTTGGCTTCCAGGTGCGCTTC
ACTGACCGGGTCAGCGAGCAGTCGCGCATCAAGTTCATGACCGACGGCATCCTGTTGGCGGAAATCGCCAGCGACCGTTG
GCTGTCGGCCTACGACACCATCATCGTGGACGAGGCGCACGAGCGCAGCCTCAACATCGATTTCCTGCTGGGCTATCTCA
AACAGTTGCTGCACAAGCGCTCCGATCTCAAGTTGATCGTCACCTCGGCCACCATCGATACCGAGCGCTTCGCACAGCAT
TTCGACAATGCGCCGGTGATCAATGTGGAAGGCCGCACCTTCCCGGTCGAAGTGCGCTACCGCCCGCTCGAAGGCGATAC
GGGCGACAGCGACGACGGCGAACACAGCAGCGGCCGCGACGGCGAGCGCAGCGTCAACGATGCGATTGTGGCGGCCATCG
ACGAGATTACCCGCATCGACCCGCGCGGCGATGTGCTGATGTTCCTGCCGGGCGAGCGCGAAATTCGCGATGCGCACCAG
GCGTTGGAACGGCGCAAATACCGAGAGACCGAAGTGGTGCCGTTGTACGCGCGGCTGTCGGCGGCCGATCAGGACCGCGT
GTTCAATCCCGGCCCGCGGCGACGCCTGGTGCTGGCCACAAACGTGGCCGAAACCTCGTTGACCGTGCCGCGCATTCGCT
ATGTGGTGGATCCGGGGCTTGCACGCGTCAAACGCTACAGTCCGCGCCAGAAGCTGGACCGTCTGCATATCGAGCCGATC
TCGCAGGCCAGCGCCAACCAGCGCATGGGCCGCTGTGGGCGTATCGCCGAGGGCATTTGCTACCGGCTGTATGCCGAAGC
GGATTTTGCCGCGCGCCCGGCGTTTACCGACCCGGAGATCCGGCGCTCGTCGTTGTCCGGCGTGATCCTGCGCATGCTGC
AGCTGGGGCTGGGCAGAATCGAAGACTTCCCGTTCCTGGAAGCGCCCGACGAACGCGCGGTGGCCGATGGCTGGCAACAG
CTGCTGGAGTTGGGCGCGATCGATGCGCAGCGGCGTCTGACCGCCACTGGCCGCCAGATGGCGCGCCTGCCGGTGGACGT
CAAGCTGGCGCGCATGCTGGTGGCCGCCCAGCAGCACGGTTGTCTGCGCGAGATGATCATCATCGCCGCATTCTTGGGCA
TCCAGGACCCGCGCGAGCGCCCGGCGGAAGCGCGCGAGGCTGCCGATAACGCGCACGCGCTGTTTGCCGATGTGCGCTCT
GAATTCGTGGGCATCCTGCGCTTGTGGGATGCGTACCGGCAGGTGCATGAAGATCTCACCCAGTCCAAGTTGCGCGACTG
GTGCAACCGGCATTTCCTCGGCTTTTTGCGCATGCGCGAGTGGCGCGAGTTGCATCGACAGCTGCGGCTGCTGTGCGAGG
AGCTCGGCTGGAGCGAAGAACCGGCCAATGTGATGCTGGCGCCATTGCTGGCCGGTGCCAGCGCGCCTGCCCGCGAGGAC
GGCCATAACGCCAACCGGCCCACGCGCGGCCAGTTGCACCGTGCCGCGCGACTGGCGCGCGAAGGCAAGCCGGATCCGAA
CACGGCGCCTGTGCAACACCCGCCTGCTGCGACGAACAAGCAGGCCGAGCCTGCCGAAGCATCTGCGCTTAGCAGCGAGC
GCGAACGTGCGGCGGCGTATCAGTCGTTGCATCGCGCGCTGCTGGCGGGCCTGCCGACGCAGATCGGTCATCGCACCGAG
AAGGGCGATTATCTGGCTGCGCGGCAACGCCGCTTCGTGCCGTTTCCGGGCTCCGCATTGGCGCGCAAGCCGCCGCCTTG
GATTGTGGCTGCCACGTTGCTGGACACGCAAAAAGTATGGGGCATGACCAATGCCGCGATCGAGCCGGATTGGGCCATCG
CCGAGCTGCCGCATCTGCTGGCGCGCAAGCACTTCGACGCGCATTGGTCGCGTGCGCAGGGGCAGGTGGTGGCGTCGGAA
CAGATCAGCCTGTTCGGGCTGGTGCTGGCGCCGAAAAAGCCGGTGCATTTCGGCAAGATCGACCCAGCCGCGGCGCATGA
CCTGTTCGTGCGCCAAGGCCTGGTGACCGGCGAAATCAACACGCGTGCCGCATTCGTGGCCGACAATCTCAAGGTGCTAG
AGCAGGCGCGTGAAGAGGAGGCCAAGCTGCGTCGTGCCGGCATCGTTGCCGACGAAGACTGGCAGGCGCGCTGGTATCTG
GATCGCATTCCAGCCGAGCTGCATTCGGCCAGTGGTCTGGATGCTTGGTGGAAGAGCTTGCCGCCAGACAAGCGCCGCAG
CCTGCATTGGTCGTTGAACGATGTGCTGCCGGGCGAGGGCTGCGAAGCCGATCGCTTTCCGAAATATTTCCCACTCGGCG
ATGCGCGCTTGCCGTTGCATTACCGCTTCGAGCCGGGGGCCATCGACGACGGCGTGACCCTGGATGTGGCGTTGCACCTG
CTCAATGCGCTGGATCCGGCGCGCCTGTCGTGGCTGGCGCCGGGCTTCGTCGCCGACAAGGCATCTGCGTTGATTCGCAG
CCTGCCCAAGGCGCAGCGCCGCAACTATGTGCCGGCACCGGATTTCGGACGTGCGTTCTACGAGGCGTTTAACGTTGCCT
CGGCCGACGATATCCGCGGCGAGCTGGCGCGCTTTCTGACCAAGGCCACCGGTACGCATGTGGCAGCGCTGGATTTCGAT
GAGCAGGCGCTGGACACGCATTTGCTGATGAACCTGCGCGTGCGCGACGACGACGGCAAGGTGCTGGACGAGTCGCGCGA
TCTGGACGGGCTGCGCGCGCGCTTTGGCGAGCGTGCCGGGCAAGCATTCGCCGCGCGGGCCGGACGCGCGCTGGTCGCCG
AGGGCCTGCGTGATTTTCCGACAGCGCCGATTCCCGAGCAGGTGGCCGGCGAGGCCGGCGTGCCGGCGTACCCGGCGCTG
GTGGATCAGGGCGACAACGCGGCGCTACGCATCTTCGCCGACCGCAACGAGGCTGCGCGGGCGCATCCGCGCGGCGTGCG
GCGCTTGCTGGAAGTCGCATTGGCCGACAAGATCAAACAGGCGCGCAAGCAACTGCCGGTGTCGCCCAAGACCGGGCTGC
TGTATGCGGCCATCGAATCGCAGGAACGCCTGCGTGGCGATCTGGTCGATGCCGCGCTCAATGCCGTGCTGGCCGATGGC
CTGGGCGCCATTCGCGACCCCGGCGCATTCGCGCAGCGCCGCGACGATGCGATCAAGCGGCTGTTCGGCGAAGCGATGGA
GCGCTTGACGCTGGCCGAAAGCATCCTGGGCGCGGTGGCCGAACTCAAGCCGTTGCTGGAAGCGCCGTTGATGGGCTGGG
CGCGCGGTAATCTGGACGACATGGAGCAGCAACTGCGCGCGCTGGTGCATGCAGGCTTCCTGCGCGACACGCCGGCCGAC
GCATTGGCCAATTATCCGCGCTACCTCAGGGCGATGATCCTGCGCACCGAGCGCGCAAAGCGCGATCCGGCACGCGACCA
GGCGCGCATGCTCGAGCTCAAACCGTTCGTGGATGCAGTGGAAGCCGCCGCCGCGCACGGTTTGCAGAACCGCGAAGACT
GGCAAGCGCTGCGCTGGGATCTGGAAGAACTGCGCGTGTCGGTGTTTGCGCAGGAGCTGGGTGCAAAGTCCGGCGTCTCG
GCGAAAAAACTGTCGCAACGTGTCGCTGCACTGCGCAGTTGA

Upstream 100 bases:

>100_bases
GGATGGTCCTTGCGGGTTGATGTCGTAGGGAACTGATATGGCGTCACAATAGACAGGCTAAAGGATCAAACGTCATTCAA
TCTTTCACATTTTTCGATCA

Downstream 100 bases:

>100_bases
GCCTTTGTGTAAAGCATGTATCTGCAGCAAGTCGCGTGCGTTTTTTACAACGCGCGCGGCGTCCTTCTTCAAGGCTCGGA
GTGGCTAATAAACCGTAGCA

Product: ATP-dependent RNA helicase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 1373; Mature: 1372

Protein sequence:

>1373_residues
MSAIDSDLANTLRERRRAVDGAMSHDRGRLLGLWSRWQGKPGNPQVRDAFEQALAASQAQRQARAEQQPAITLDNQLPIA
REAERIIALIRDHQVVVIAGETGSGKTTQLPKLCLAAGRGAAGMIGCTQPRRIAARAVAARVAEELKTPLGTIVGFQVRF
TDRVSEQSRIKFMTDGILLAEIASDRWLSAYDTIIVDEAHERSLNIDFLLGYLKQLLHKRSDLKLIVTSATIDTERFAQH
FDNAPVINVEGRTFPVEVRYRPLEGDTGDSDDGEHSSGRDGERSVNDAIVAAIDEITRIDPRGDVLMFLPGEREIRDAHQ
ALERRKYRETEVVPLYARLSAADQDRVFNPGPRRRLVLATNVAETSLTVPRIRYVVDPGLARVKRYSPRQKLDRLHIEPI
SQASANQRMGRCGRIAEGICYRLYAEADFAARPAFTDPEIRRSSLSGVILRMLQLGLGRIEDFPFLEAPDERAVADGWQQ
LLELGAIDAQRRLTATGRQMARLPVDVKLARMLVAAQQHGCLREMIIIAAFLGIQDPRERPAEAREAADNAHALFADVRS
EFVGILRLWDAYRQVHEDLTQSKLRDWCNRHFLGFLRMREWRELHRQLRLLCEELGWSEEPANVMLAPLLAGASAPARED
GHNANRPTRGQLHRAARLAREGKPDPNTAPVQHPPAATNKQAEPAEASALSSERERAAAYQSLHRALLAGLPTQIGHRTE
KGDYLAARQRRFVPFPGSALARKPPPWIVAATLLDTQKVWGMTNAAIEPDWAIAELPHLLARKHFDAHWSRAQGQVVASE
QISLFGLVLAPKKPVHFGKIDPAAAHDLFVRQGLVTGEINTRAAFVADNLKVLEQAREEEAKLRRAGIVADEDWQARWYL
DRIPAELHSASGLDAWWKSLPPDKRRSLHWSLNDVLPGEGCEADRFPKYFPLGDARLPLHYRFEPGAIDDGVTLDVALHL
LNALDPARLSWLAPGFVADKASALIRSLPKAQRRNYVPAPDFGRAFYEAFNVASADDIRGELARFLTKATGTHVAALDFD
EQALDTHLLMNLRVRDDDGKVLDESRDLDGLRARFGERAGQAFAARAGRALVAEGLRDFPTAPIPEQVAGEAGVPAYPAL
VDQGDNAALRIFADRNEAARAHPRGVRRLLEVALADKIKQARKQLPVSPKTGLLYAAIESQERLRGDLVDAALNAVLADG
LGAIRDPGAFAQRRDDAIKRLFGEAMERLTLAESILGAVAELKPLLEAPLMGWARGNLDDMEQQLRALVHAGFLRDTPAD
ALANYPRYLRAMILRTERAKRDPARDQARMLELKPFVDAVEAAAAHGLQNREDWQALRWDLEELRVSVFAQELGAKSGVS
AKKLSQRVAALRS

Sequences:

>Translated_1373_residues
MSAIDSDLANTLRERRRAVDGAMSHDRGRLLGLWSRWQGKPGNPQVRDAFEQALAASQAQRQARAEQQPAITLDNQLPIA
REAERIIALIRDHQVVVIAGETGSGKTTQLPKLCLAAGRGAAGMIGCTQPRRIAARAVAARVAEELKTPLGTIVGFQVRF
TDRVSEQSRIKFMTDGILLAEIASDRWLSAYDTIIVDEAHERSLNIDFLLGYLKQLLHKRSDLKLIVTSATIDTERFAQH
FDNAPVINVEGRTFPVEVRYRPLEGDTGDSDDGEHSSGRDGERSVNDAIVAAIDEITRIDPRGDVLMFLPGEREIRDAHQ
ALERRKYRETEVVPLYARLSAADQDRVFNPGPRRRLVLATNVAETSLTVPRIRYVVDPGLARVKRYSPRQKLDRLHIEPI
SQASANQRMGRCGRIAEGICYRLYAEADFAARPAFTDPEIRRSSLSGVILRMLQLGLGRIEDFPFLEAPDERAVADGWQQ
LLELGAIDAQRRLTATGRQMARLPVDVKLARMLVAAQQHGCLREMIIIAAFLGIQDPRERPAEAREAADNAHALFADVRS
EFVGILRLWDAYRQVHEDLTQSKLRDWCNRHFLGFLRMREWRELHRQLRLLCEELGWSEEPANVMLAPLLAGASAPARED
GHNANRPTRGQLHRAARLAREGKPDPNTAPVQHPPAATNKQAEPAEASALSSERERAAAYQSLHRALLAGLPTQIGHRTE
KGDYLAARQRRFVPFPGSALARKPPPWIVAATLLDTQKVWGMTNAAIEPDWAIAELPHLLARKHFDAHWSRAQGQVVASE
QISLFGLVLAPKKPVHFGKIDPAAAHDLFVRQGLVTGEINTRAAFVADNLKVLEQAREEEAKLRRAGIVADEDWQARWYL
DRIPAELHSASGLDAWWKSLPPDKRRSLHWSLNDVLPGEGCEADRFPKYFPLGDARLPLHYRFEPGAIDDGVTLDVALHL
LNALDPARLSWLAPGFVADKASALIRSLPKAQRRNYVPAPDFGRAFYEAFNVASADDIRGELARFLTKATGTHVAALDFD
EQALDTHLLMNLRVRDDDGKVLDESRDLDGLRARFGERAGQAFAARAGRALVAEGLRDFPTAPIPEQVAGEAGVPAYPAL
VDQGDNAALRIFADRNEAARAHPRGVRRLLEVALADKIKQARKQLPVSPKTGLLYAAIESQERLRGDLVDAALNAVLADG
LGAIRDPGAFAQRRDDAIKRLFGEAMERLTLAESILGAVAELKPLLEAPLMGWARGNLDDMEQQLRALVHAGFLRDTPAD
ALANYPRYLRAMILRTERAKRDPARDQARMLELKPFVDAVEAAAAHGLQNREDWQALRWDLEELRVSVFAQELGAKSGVS
AKKLSQRVAALRS
>Mature_1372_residues
SAIDSDLANTLRERRRAVDGAMSHDRGRLLGLWSRWQGKPGNPQVRDAFEQALAASQAQRQARAEQQPAITLDNQLPIAR
EAERIIALIRDHQVVVIAGETGSGKTTQLPKLCLAAGRGAAGMIGCTQPRRIAARAVAARVAEELKTPLGTIVGFQVRFT
DRVSEQSRIKFMTDGILLAEIASDRWLSAYDTIIVDEAHERSLNIDFLLGYLKQLLHKRSDLKLIVTSATIDTERFAQHF
DNAPVINVEGRTFPVEVRYRPLEGDTGDSDDGEHSSGRDGERSVNDAIVAAIDEITRIDPRGDVLMFLPGEREIRDAHQA
LERRKYRETEVVPLYARLSAADQDRVFNPGPRRRLVLATNVAETSLTVPRIRYVVDPGLARVKRYSPRQKLDRLHIEPIS
QASANQRMGRCGRIAEGICYRLYAEADFAARPAFTDPEIRRSSLSGVILRMLQLGLGRIEDFPFLEAPDERAVADGWQQL
LELGAIDAQRRLTATGRQMARLPVDVKLARMLVAAQQHGCLREMIIIAAFLGIQDPRERPAEAREAADNAHALFADVRSE
FVGILRLWDAYRQVHEDLTQSKLRDWCNRHFLGFLRMREWRELHRQLRLLCEELGWSEEPANVMLAPLLAGASAPAREDG
HNANRPTRGQLHRAARLAREGKPDPNTAPVQHPPAATNKQAEPAEASALSSERERAAAYQSLHRALLAGLPTQIGHRTEK
GDYLAARQRRFVPFPGSALARKPPPWIVAATLLDTQKVWGMTNAAIEPDWAIAELPHLLARKHFDAHWSRAQGQVVASEQ
ISLFGLVLAPKKPVHFGKIDPAAAHDLFVRQGLVTGEINTRAAFVADNLKVLEQAREEEAKLRRAGIVADEDWQARWYLD
RIPAELHSASGLDAWWKSLPPDKRRSLHWSLNDVLPGEGCEADRFPKYFPLGDARLPLHYRFEPGAIDDGVTLDVALHLL
NALDPARLSWLAPGFVADKASALIRSLPKAQRRNYVPAPDFGRAFYEAFNVASADDIRGELARFLTKATGTHVAALDFDE
QALDTHLLMNLRVRDDDGKVLDESRDLDGLRARFGERAGQAFAARAGRALVAEGLRDFPTAPIPEQVAGEAGVPAYPALV
DQGDNAALRIFADRNEAARAHPRGVRRLLEVALADKIKQARKQLPVSPKTGLLYAAIESQERLRGDLVDAALNAVLADGL
GAIRDPGAFAQRRDDAIKRLFGEAMERLTLAESILGAVAELKPLLEAPLMGWARGNLDDMEQQLRALVHAGFLRDTPADA
LANYPRYLRAMILRTERAKRDPARDQARMLELKPFVDAVEAAAAHGLQNREDWQALRWDLEELRVSVFAQELGAKSGVSA
KKLSQRVAALRS

Specific function: Not yet known [H]

COG id: COG1643

COG function: function code L; HrpA-like helicases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 helicase C-terminal domain [H]

Homologues:

Organism=Homo sapiens, GI4826690, Length=542, Percent_Identity=38.1918819188192, Blast_Score=391, Evalue=1e-108,
Organism=Homo sapiens, GI256000749, Length=570, Percent_Identity=40, Blast_Score=390, Evalue=1e-108,
Organism=Homo sapiens, GI255982614, Length=570, Percent_Identity=40, Blast_Score=390, Evalue=1e-108,
Organism=Homo sapiens, GI17999539, Length=544, Percent_Identity=38.9705882352941, Blast_Score=379, Evalue=1e-105,
Organism=Homo sapiens, GI38158022, Length=594, Percent_Identity=39.5622895622896, Blast_Score=377, Evalue=1e-104,
Organism=Homo sapiens, GI68509926, Length=555, Percent_Identity=37.4774774774775, Blast_Score=373, Evalue=1e-103,
Organism=Homo sapiens, GI20544129, Length=666, Percent_Identity=34.5345345345345, Blast_Score=348, Evalue=3e-95,
Organism=Homo sapiens, GI20336302, Length=562, Percent_Identity=35.2313167259786, Blast_Score=341, Evalue=3e-93,
Organism=Homo sapiens, GI261878478, Length=565, Percent_Identity=35.929203539823, Blast_Score=327, Evalue=6e-89,
Organism=Homo sapiens, GI299829255, Length=583, Percent_Identity=35.1629502572899, Blast_Score=310, Evalue=6e-84,
Organism=Homo sapiens, GI167830433, Length=583, Percent_Identity=32.4185248713551, Blast_Score=279, Evalue=1e-74,
Organism=Homo sapiens, GI167830436, Length=580, Percent_Identity=32.0689655172414, Blast_Score=270, Evalue=8e-72,
Organism=Homo sapiens, GI20336294, Length=617, Percent_Identity=31.9286871961102, Blast_Score=261, Evalue=3e-69,
Organism=Homo sapiens, GI20336290, Length=617, Percent_Identity=31.9286871961102, Blast_Score=261, Evalue=3e-69,
Organism=Homo sapiens, GI166851804, Length=582, Percent_Identity=31.786941580756, Blast_Score=248, Evalue=3e-65,
Organism=Homo sapiens, GI261878481, Length=472, Percent_Identity=32.2033898305085, Blast_Score=229, Evalue=1e-59,
Organism=Homo sapiens, GI100913206, Length=595, Percent_Identity=29.2436974789916, Blast_Score=227, Evalue=6e-59,
Organism=Homo sapiens, GI20336300, Length=545, Percent_Identity=26.7889908256881, Blast_Score=197, Evalue=8e-50,
Organism=Homo sapiens, GI67782362, Length=223, Percent_Identity=40.3587443946188, Blast_Score=174, Evalue=5e-43,
Organism=Homo sapiens, GI163914394, Length=516, Percent_Identity=29.0697674418605, Blast_Score=174, Evalue=6e-43,
Organism=Homo sapiens, GI29029601, Length=262, Percent_Identity=38.9312977099237, Blast_Score=171, Evalue=5e-42,
Organism=Homo sapiens, GI269847874, Length=184, Percent_Identity=45.6521739130435, Blast_Score=160, Evalue=9e-39,
Organism=Homo sapiens, GI39777586, Length=201, Percent_Identity=42.7860696517413, Blast_Score=159, Evalue=2e-38,
Organism=Escherichia coli, GI145693127, Length=617, Percent_Identity=53.6466774716369, Blast_Score=642, Evalue=0.0,
Organism=Escherichia coli, GI87081693, Length=446, Percent_Identity=38.5650224215247, Blast_Score=249, Evalue=8e-67,
Organism=Caenorhabditis elegans, GI17535281, Length=586, Percent_Identity=37.542662116041, Blast_Score=390, Evalue=1e-108,
Organism=Caenorhabditis elegans, GI17554326, Length=551, Percent_Identity=39.5644283121597, Blast_Score=386, Evalue=1e-107,
Organism=Caenorhabditis elegans, GI17531507, Length=552, Percent_Identity=36.9565217391304, Blast_Score=368, Evalue=1e-101,
Organism=Caenorhabditis elegans, GI25144243, Length=558, Percent_Identity=35.3046594982079, Blast_Score=365, Evalue=1e-100,
Organism=Caenorhabditis elegans, GI32565154, Length=558, Percent_Identity=35.3046594982079, Blast_Score=365, Evalue=1e-100,
Organism=Caenorhabditis elegans, GI17556386, Length=572, Percent_Identity=36.013986013986, Blast_Score=339, Evalue=6e-93,
Organism=Caenorhabditis elegans, GI71996313, Length=592, Percent_Identity=36.8243243243243, Blast_Score=318, Evalue=1e-86,
Organism=Caenorhabditis elegans, GI71990212, Length=577, Percent_Identity=33.6221837088388, Blast_Score=301, Evalue=2e-81,
Organism=Caenorhabditis elegans, GI86562256, Length=604, Percent_Identity=28.3112582781457, Blast_Score=203, Evalue=6e-52,
Organism=Caenorhabditis elegans, GI17552054, Length=262, Percent_Identity=36.6412213740458, Blast_Score=157, Evalue=5e-38,
Organism=Caenorhabditis elegans, GI17507503, Length=192, Percent_Identity=41.1458333333333, Blast_Score=141, Evalue=2e-33,
Organism=Saccharomyces cerevisiae, GI6321318, Length=554, Percent_Identity=36.4620938628159, Blast_Score=373, Evalue=1e-103,
Organism=Saccharomyces cerevisiae, GI6320850, Length=552, Percent_Identity=36.5942028985507, Blast_Score=370, Evalue=1e-103,
Organism=Saccharomyces cerevisiae, GI6322939, Length=562, Percent_Identity=38.2562277580071, Blast_Score=363, Evalue=1e-100,
Organism=Saccharomyces cerevisiae, GI6324338, Length=565, Percent_Identity=35.3982300884956, Blast_Score=346, Evalue=2e-95,
Organism=Saccharomyces cerevisiae, GI6322772, Length=568, Percent_Identity=37.1478873239437, Blast_Score=342, Evalue=2e-94,
Organism=Saccharomyces cerevisiae, GI6323451, Length=611, Percent_Identity=27.986906710311, Blast_Score=236, Evalue=1e-62,
Organism=Saccharomyces cerevisiae, GI6323776, Length=261, Percent_Identity=39.463601532567, Blast_Score=167, Evalue=1e-41,
Organism=Drosophila melanogaster, GI19921728, Length=550, Percent_Identity=39.0909090909091, Blast_Score=394, Evalue=1e-109,
Organism=Drosophila melanogaster, GI18859729, Length=541, Percent_Identity=39.9260628465804, Blast_Score=386, Evalue=1e-107,
Organism=Drosophila melanogaster, GI19921526, Length=569, Percent_Identity=37.7855887521968, Blast_Score=384, Evalue=1e-106,
Organism=Drosophila melanogaster, GI20129977, Length=542, Percent_Identity=37.8228782287823, Blast_Score=371, Evalue=1e-102,
Organism=Drosophila melanogaster, GI19920696, Length=552, Percent_Identity=37.8623188405797, Blast_Score=355, Evalue=2e-97,
Organism=Drosophila melanogaster, GI45550174, Length=651, Percent_Identity=34.4086021505376, Blast_Score=339, Evalue=8e-93,
Organism=Drosophila melanogaster, GI24643238, Length=560, Percent_Identity=34.2857142857143, Blast_Score=310, Evalue=6e-84,
Organism=Drosophila melanogaster, GI24642763, Length=552, Percent_Identity=33.3333333333333, Blast_Score=276, Evalue=1e-73,
Organism=Drosophila melanogaster, GI24585491, Length=625, Percent_Identity=30.24, Blast_Score=269, Evalue=1e-71,
Organism=Drosophila melanogaster, GI17136508, Length=624, Percent_Identity=32.2115384615385, Blast_Score=240, Evalue=6e-63,
Organism=Drosophila melanogaster, GI17136342, Length=618, Percent_Identity=29.7734627831715, Blast_Score=236, Evalue=1e-61,
Organism=Drosophila melanogaster, GI24585920, Length=586, Percent_Identity=30.7167235494881, Blast_Score=235, Evalue=2e-61,
Organism=Drosophila melanogaster, GI24641942, Length=386, Percent_Identity=34.4559585492228, Blast_Score=224, Evalue=3e-58,
Organism=Drosophila melanogaster, GI17136242, Length=259, Percent_Identity=38.2239382239382, Blast_Score=171, Evalue=4e-42,
Organism=Drosophila melanogaster, GI24641139, Length=348, Percent_Identity=31.3218390804598, Blast_Score=159, Evalue=2e-38,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR014001
- InterPro:   IPR011545
- InterPro:   IPR011709
- InterPro:   IPR007502
- InterPro:   IPR001650
- InterPro:   IPR014021
- InterPro:   IPR010222 [H]

Pfam domain/function: PF00270 DEAD; PF07717 DUF1605; PF04408 HA2; PF00271 Helicase_C [H]

EC number: =3.6.4.13 [H]

Molecular weight: Translated: 152465; Mature: 152334

Theoretical pI: Translated: 8.52; Mature: 8.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAIDSDLANTLRERRRAVDGAMSHDRGRLLGLWSRWQGKPGNPQVRDAFEQALAASQAQ
CCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHCCCCCCCCHHHHHHHHHHHHHHHH
RQARAEQQPAITLDNQLPIAREAERIIALIRDHQVVVIAGETGSGKTTQLPKLCLAAGRG
HHHHHHCCCCEEECCCCCCHHHHHHHHHHHCCCEEEEEECCCCCCCCCHHHHHHHHCCCC
AAGMIGCTQPRRIAARAVAARVAEELKTPLGTIVGFQVRFTDRVSEQSRIKFMTDGILLA
CCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHEEEEEEHHHCCCHHHHHHHHCCCCEE
EIASDRWLSAYDTIIVDEAHERSLNIDFLLGYLKQLLHKRSDLKLIVTSATIDTERFAQH
HHHCCCHHHHHHHEEEECHHHCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHH
FDNAPVINVEGRTFPVEVRYRPLEGDTGDSDDGEHSSGRDGERSVNDAIVAAIDEITRID
CCCCCEEEECCCEEEEEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCC
PRGDVLMFLPGEREIRDAHQALERRKYRETEVVPLYARLSAADQDRVFNPGPRRRLVLAT
CCCCEEEECCCCHHHHHHHHHHHHHHCCCCCCEEHHHHHCCCCCCCCCCCCCCCEEEEEE
NVAETSLTVPRIRYVVDPGLARVKRYSPRQKLDRLHIEPISQASANQRMGRCGRIAEGIC
CCCHHCCCCHHHHHHCCCHHHHHHHCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH
YRLYAEADFAARPAFTDPEIRRSSLSGVILRMLQLGLGRIEDFPFLEAPDERAVADGWQQ
HHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHH
LLELGAIDAQRRLTATGRQMARLPVDVKLARMLVAAQQHGCLREMIIIAAFLGIQDPRER
HHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHCC
PAEAREAADNAHALFADVRSEFVGILRLWDAYRQVHEDLTQSKLRDWCNRHFLGFLRMRE
CHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
WRELHRQLRLLCEELGWSEEPANVMLAPLLAGASAPAREDGHNANRPTRGQLHRAARLAR
HHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
EGKPDPNTAPVQHPPAATNKQAEPAEASALSSERERAAAYQSLHRALLAGLPTQIGHRTE
CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCC
KGDYLAARQRRFVPFPGSALARKPPPWIVAATLLDTQKVWGMTNAAIEPDWAIAELPHLL
CCCHHHHHCCCCCCCCCCCCCCCCCCCEEEHHHHHHHHHHCCCCCCCCCCHHHHHHHHHH
ARKHFDAHWSRAQGQVVASEQISLFGLVLAPKKPVHFGKIDPAAAHDLFVRQGLVTGEIN
HHHHHHHHHHHCCCCEEECCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHCCCEECCCC
TRAAFVADNLKVLEQAREEEAKLRRAGIVADEDWQARWYLDRIPAELHSASGLDAWWKSL
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCHHHHCCCCHHHHHHCC
PPDKRRSLHWSLNDVLPGEGCEADRFPKYFPLGDARLPLHYRFEPGAIDDGVTLDVALHL
CCHHHCCEEEEHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCHHHHHHHH
LNALDPARLSWLAPGFVADKASALIRSLPKAQRRNYVPAPDFGRAFYEAFNVASADDIRG
HHCCCHHHHHHCCCCHHHHHHHHHHHHCCHHHHCCCCCCCCHHHHHHHHHCCCCHHHHHH
ELARFLTKATGTHVAALDFDEQALDTHLLMNLRVRDDDGKVLDESRDLDGLRARFGERAG
HHHHHHHHHCCCEEEEECCCHHHHHHHHHEEEEEECCCCCCCCCCCCCHHHHHHHHHHHH
QAFAARAGRALVAEGLRDFPTAPIPEQVAGEAGVPAYPALVDQGDNAALRIFADRNEAAR
HHHHHHCCHHHHHHHHHHCCCCCCCHHHCCCCCCCCCHHHHCCCCCCEEEEEECCCCHHH
AHPRGVRRLLEVALADKIKQARKQLPVSPKTGLLYAAIESQERLRGDLVDAALNAVLADG
CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHC
LGAIRDPGAFAQRRDDAIKRLFGEAMERLTLAESILGAVAELKPLLEAPLMGWARGNLDD
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH
MEQQLRALVHAGFLRDTPADALANYPRYLRAMILRTERAKRDPARDQARMLELKPFVDAV
HHHHHHHHHHHHHHCCCCHHHHHCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
EAAAAHGLQNREDWQALRWDLEELRVSVFAQELGAKSGVSAKKLSQRVAALRS
HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCC
>Mature Secondary Structure 
SAIDSDLANTLRERRRAVDGAMSHDRGRLLGLWSRWQGKPGNPQVRDAFEQALAASQAQ
CCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHCCCCCCCCHHHHHHHHHHHHHHHH
RQARAEQQPAITLDNQLPIAREAERIIALIRDHQVVVIAGETGSGKTTQLPKLCLAAGRG
HHHHHHCCCCEEECCCCCCHHHHHHHHHHHCCCEEEEEECCCCCCCCCHHHHHHHHCCCC
AAGMIGCTQPRRIAARAVAARVAEELKTPLGTIVGFQVRFTDRVSEQSRIKFMTDGILLA
CCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHEEEEEEHHHCCCHHHHHHHHCCCCEE
EIASDRWLSAYDTIIVDEAHERSLNIDFLLGYLKQLLHKRSDLKLIVTSATIDTERFAQH
HHHCCCHHHHHHHEEEECHHHCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHH
FDNAPVINVEGRTFPVEVRYRPLEGDTGDSDDGEHSSGRDGERSVNDAIVAAIDEITRID
CCCCCEEEECCCEEEEEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCC
PRGDVLMFLPGEREIRDAHQALERRKYRETEVVPLYARLSAADQDRVFNPGPRRRLVLAT
CCCCEEEECCCCHHHHHHHHHHHHHHCCCCCCEEHHHHHCCCCCCCCCCCCCCCEEEEEE
NVAETSLTVPRIRYVVDPGLARVKRYSPRQKLDRLHIEPISQASANQRMGRCGRIAEGIC
CCCHHCCCCHHHHHHCCCHHHHHHHCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH
YRLYAEADFAARPAFTDPEIRRSSLSGVILRMLQLGLGRIEDFPFLEAPDERAVADGWQQ
HHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHH
LLELGAIDAQRRLTATGRQMARLPVDVKLARMLVAAQQHGCLREMIIIAAFLGIQDPRER
HHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHCC
PAEAREAADNAHALFADVRSEFVGILRLWDAYRQVHEDLTQSKLRDWCNRHFLGFLRMRE
CHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
WRELHRQLRLLCEELGWSEEPANVMLAPLLAGASAPAREDGHNANRPTRGQLHRAARLAR
HHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
EGKPDPNTAPVQHPPAATNKQAEPAEASALSSERERAAAYQSLHRALLAGLPTQIGHRTE
CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCC
KGDYLAARQRRFVPFPGSALARKPPPWIVAATLLDTQKVWGMTNAAIEPDWAIAELPHLL
CCCHHHHHCCCCCCCCCCCCCCCCCCCEEEHHHHHHHHHHCCCCCCCCCCHHHHHHHHHH
ARKHFDAHWSRAQGQVVASEQISLFGLVLAPKKPVHFGKIDPAAAHDLFVRQGLVTGEIN
HHHHHHHHHHHCCCCEEECCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHCCCEECCCC
TRAAFVADNLKVLEQAREEEAKLRRAGIVADEDWQARWYLDRIPAELHSASGLDAWWKSL
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCHHHHCCCCHHHHHHCC
PPDKRRSLHWSLNDVLPGEGCEADRFPKYFPLGDARLPLHYRFEPGAIDDGVTLDVALHL
CCHHHCCEEEEHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCHHHHHHHH
LNALDPARLSWLAPGFVADKASALIRSLPKAQRRNYVPAPDFGRAFYEAFNVASADDIRG
HHCCCHHHHHHCCCCHHHHHHHHHHHHCCHHHHCCCCCCCCHHHHHHHHHCCCCHHHHHH
ELARFLTKATGTHVAALDFDEQALDTHLLMNLRVRDDDGKVLDESRDLDGLRARFGERAG
HHHHHHHHHCCCEEEEECCCHHHHHHHHHEEEEEECCCCCCCCCCCCCHHHHHHHHHHHH
QAFAARAGRALVAEGLRDFPTAPIPEQVAGEAGVPAYPALVDQGDNAALRIFADRNEAAR
HHHHHHCCHHHHHHHHHHCCCCCCCHHHCCCCCCCCCHHHHCCCCCCEEEEEECCCCHHH
AHPRGVRRLLEVALADKIKQARKQLPVSPKTGLLYAAIESQERLRGDLVDAALNAVLADG
CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHC
LGAIRDPGAFAQRRDDAIKRLFGEAMERLTLAESILGAVAELKPLLEAPLMGWARGNLDD
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH
MEQQLRALVHAGFLRDTPADALANYPRYLRAMILRTERAKRDPARDQARMLELKPFVDAV
HHHHHHHHHHHHHHCCCCHHHHHCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
EAAAAHGLQNREDWQALRWDLEELRVSVFAQELGAKSGVSAKKLSQRVAALRS
HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7899078; 9097039; 9278503 [H]