| Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
|---|---|
| Accession | NC_007705 |
| Length | 4,940,217 |
Click here to switch to the map view.
The map label for this gene is 84623199
Identifier: 84623199
GI number: 84623199
Start: 1699001
End: 1699600
Strand: Direct
Name: 84623199
Synonym: XOO_1542
Alternate gene names: NA
Gene position: 1699001-1699600 (Clockwise)
Preceding gene: 84623198
Following gene: 84623200
Centisome position: 34.39
GC content: 71.5
Gene sequence:
>600_bases GTGCTGCTGGTGCATGGCATCTGGAACACCACGCATTGGCTGCTGCCGTTGGCGCGGCGGATGCGTGCGGACGGCCTGGC GCCTGCGCTGTTCGGTTACGCCAGCGTGCTCGGCGGTCCCGCGCGGGCGGTGCCATGTTTGATCGAACGTCTGCGCGCCA GCCGTGCGCAGTGGGTGGTCTGCCACAGCCTGGGCGGCCTGATGACCCTGCAGGCATTGCAGGATGCGCCCGAGCTGCCG GTGCGCCGCGTGGTTTGTCTGGGCTCGCCGCTATGCGGCAGTGCCGCTGCACGCGGACTGGCGCAACGCGGCGGGCTGTG GGCGATGGGCCGCAGCGCCGCGATCTTGCAACAGGGCTTCGCGCGCTGGGATGGCCAGGCCGAGATCGGTCAGGTCGCCG GCAGCGTCGCGCGCGGGGTCGGCCGTTGGCTTGCCCCGCTCGACGGCGATTCGGACGGAACTGTTGCACTGGCCGAAACC CGTCTGCCCGGGTTGCGCGACCATTGCGTGATGCGGGCAAGCCACAGCGGCCTGTTGCGCTCGCCCGAGGCCGCCGCACA GGCGCTGGCCTTCCTGCGCTGCGGCCGCTTTCGGTCGTGA
Upstream 100 bases:
>100_bases CCATGTCCCGGTAACCACCTCAGTGTCCAGCGCATCACCCATCAGCCCGGCCACGCCGCGGCGCAATCCACGCGCGCAGG CCACCGCCGCGACCGCCGAC
Downstream 100 bases:
>100_bases ACATGCGCCGGCGGATGTTGTGGCCCCGGTGAGGGCAGGCAATCAGGTAAAATCCGCGCCCTGTCATCCAAGCCAGTCTG GAACCACCCATGGGTAGAGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 199; Mature: 199
Protein sequence:
>199_residues MLLVHGIWNTTHWLLPLARRMRADGLAPALFGYASVLGGPARAVPCLIERLRASRAQWVVCHSLGGLMTLQALQDAPELP VRRVVCLGSPLCGSAAARGLAQRGGLWAMGRSAAILQQGFARWDGQAEIGQVAGSVARGVGRWLAPLDGDSDGTVALAET RLPGLRDHCVMRASHSGLLRSPEAAAQALAFLRCGRFRS
Sequences:
>Translated_199_residues MLLVHGIWNTTHWLLPLARRMRADGLAPALFGYASVLGGPARAVPCLIERLRASRAQWVVCHSLGGLMTLQALQDAPELP VRRVVCLGSPLCGSAAARGLAQRGGLWAMGRSAAILQQGFARWDGQAEIGQVAGSVARGVGRWLAPLDGDSDGTVALAET RLPGLRDHCVMRASHSGLLRSPEAAAQALAFLRCGRFRS >Mature_199_residues MLLVHGIWNTTHWLLPLARRMRADGLAPALFGYASVLGGPARAVPCLIERLRASRAQWVVCHSLGGLMTLQALQDAPELP VRRVVCLGSPLCGSAAARGLAQRGGLWAMGRSAAILQQGFARWDGQAEIGQVAGSVARGVGRWLAPLDGDSDGTVALAET RLPGLRDHCVMRASHSGLLRSPEAAAQALAFLRCGRFRS
Specific function: Unknown
COG id: COG1075
COG function: function code R; Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21120; Mature: 21120
Theoretical pI: Translated: 11.51; Mature: 11.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 3.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLLVHGIWNTTHWLLPLARRMRADGLAPALFGYASVLGGPARAVPCLIERLRASRAQWVV CEEEEECCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHEHH CHSLGGLMTLQALQDAPELPVRRVVCLGSPLCGSAAARGLAQRGGLWAMGRSAAILQQGF HHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCHHHHHHHHHHHCCEEECCCHHHHHHHHH ARWDGQAEIGQVAGSVARGVGRWLAPLDGDSDGTVALAETRLPGLRDHCVMRASHSGLLR HHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCHHHHHHHHHCCCCCCC SPEAAAQALAFLRCGRFRS CHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MLLVHGIWNTTHWLLPLARRMRADGLAPALFGYASVLGGPARAVPCLIERLRASRAQWVV CEEEEECCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHEHH CHSLGGLMTLQALQDAPELPVRRVVCLGSPLCGSAAARGLAQRGGLWAMGRSAAILQQGF HHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCHHHHHHHHHHHCCEEECCCHHHHHHHHH ARWDGQAEIGQVAGSVARGVGRWLAPLDGDSDGTVALAETRLPGLRDHCVMRASHSGLLR HHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCHHHHHHHHHCCCCCCC SPEAAAQALAFLRCGRFRS CHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA