Definition Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome.
Accession NC_007705
Length 4,940,217

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The map label for this gene is 84623149

Identifier: 84623149

GI number: 84623149

Start: 1635598

End: 1637199

Strand: Direct

Name: 84623149

Synonym: XOO_1492

Alternate gene names: NA

Gene position: 1635598-1637199 (Clockwise)

Preceding gene: 84623147

Following gene: 84623152

Centisome position: 33.11

GC content: 66.54

Gene sequence:

>1602_bases
ATGTCGGCTCCTTCTTCGCGTCCTGCGGCCTCGCCGCGCTGGTTCGTCGCTGGCGATCTCAATGGCTTCTTTGGCCTGGT
GGTCGACAATCTGTCTATCCTCGGCTTTATCGCGATGGCCTTGGTCGGCATCTTCCAGTTCCCGGCCGAGGTGGTCTTCG
GGCGCATGTTCCCGGGCACCGCATTCGGCGTGCTGGTGGGCAACCTGCTGTACACCCTGATGGCGCGGCGACTTGCTGCA
CGCACCGGGCGCGACGATGTCACCGCCATGCCGCTGGGCCTGGATGCGCCCACCAGCATCGGCATGGCGCTGCTGGTGCT
CGGCCCGGCATTTGCCGGTTTCAAAGCGCAGGGGCTGGACCCGCAAGCCGCCGCGATCGCCACCTGGAAACTCGGCATGG
CCGCACTGGTGGTGATTGGCCTGCTCAAGCTGGTGCTGTCGTTCGTGGGCGAAGCGGTGACGCGTGCACTACCGCGTGCG
GCCTTGCTCGGTTCCATCGCCGGCATCGCGCTGGTGTTGATGGGCTTGTTGCCGCTGCTGGAAACGCTACGCTCGCCGGT
CGCCGGTTTCGTCACCCTGGGTCTGCTGCTGTATGTGCTGCTGGCCAAGGGCCGCCTGCCGACGAAATTGCCCGGCGTGC
TGGTGGCGTTTTTGATCGGCACCGCGCTGTACTACGGGCTCGCCTTGGCGGGACTGGGCGCGCCCGGTTTCGCCGTGCCG
GCGTGGAACCCGCCGCAGATCGTGCTGCCGTTGCCGAACCTCGGCTTCATCGACGGCCTGCCGGCCACGGTGGCGTACTT
GCCGTTGCTGCTGCCGTTCGGCGTATTGATGGTGGTGGGCGGCATCAACGTCAGCGAAAGCGCGCGCGCGGCCGGCGACG
ATTACCGCACCCGCGACATCCTGCTGGTGGAAGCCTTGGCCACGCTGGTGGCCGGCGTCTGCGGCGGCGTGGCGCAGACC
ACGCCCTACATCGGCCAGCCCGCGTACAAGCACATGGGCGCGCGCTCCGGTTACACGCTGCTGACGGGGGTGTTTATCGG
TATCGGCGGCATGCTTGGGGTGATCAGCGGGCTGGTGCAATGGCTACCGCTGGCAGTGCTGGCGCCCATCATCGTGTACG
TCTCGATCGACATCACCACGCAGGCATTCCAGGCCACGCCGAAACAGCACGCCGGCGCGATGGTGCTGGGCTTTCTGCCG
TCGGTGGCGTACCTGTTGACCATCAAGGCACCGGGCTGGATCGCGCCGGATCAGCTGGTGGCGCTGACCACCAAGGTCGA
CGGCCACGGGCTGCCGGAGCTGGCAGTGATCTTCGCGCTGGGCAACGGCTTCATCATCACCGCGATGCTGTGGATTGCCA
CGGTGGCAGCGATGATCGATGGCCGGCTGCGGCGCGGTGCGGTGTGCCTGCTGGTGGCTGCGGGGCTGACCTTGTTCGGT
TTGATCCATTCGGTGGACCCGCGTGGCGGCATCTATCTGCCGTGGTCGCTGCAAGGTCTGGCGCGCGTGATCAGCTGGCA
GTTCGTCGGTGCCTATGTTGCGCTGGCGGCGACCTTGCTGCTGTTGTCGCTACTGTCGGCACGTAAGGAGGCACTGCAGT
GA

Upstream 100 bases:

>100_bases
CCGGCGTCTAGGAGTTGCTTCGCTATGTTACCGGTCGCGCCGCTGTCGCCACTGCAGTGCAGCAGCTACCATCGGCCGAC
CCTCACGCTTCCTGGTTCTC

Downstream 100 bases:

>100_bases
CCTATCGTTCGCGTGTTGCGCAGTGCATTGTGGGTAGCGCGTTGTTGCTCAGCGCCAGCGCGGCATGGTCGGCGTCGTTC
GACTGCTTGGCTTCGTGCCG

Product: hypothetical protein

Products: NA

Alternate protein names: Permease; MFS Transporter Xanthine/Uracil Permease; Permease Subfamily Putative; Sulphate Transporter; Regulator; Transcriptional Regulator; Permease Subfamily

Number of amino acids: Translated: 533; Mature: 532

Protein sequence:

>533_residues
MSAPSSRPAASPRWFVAGDLNGFFGLVVDNLSILGFIAMALVGIFQFPAEVVFGRMFPGTAFGVLVGNLLYTLMARRLAA
RTGRDDVTAMPLGLDAPTSIGMALLVLGPAFAGFKAQGLDPQAAAIATWKLGMAALVVIGLLKLVLSFVGEAVTRALPRA
ALLGSIAGIALVLMGLLPLLETLRSPVAGFVTLGLLLYVLLAKGRLPTKLPGVLVAFLIGTALYYGLALAGLGAPGFAVP
AWNPPQIVLPLPNLGFIDGLPATVAYLPLLLPFGVLMVVGGINVSESARAAGDDYRTRDILLVEALATLVAGVCGGVAQT
TPYIGQPAYKHMGARSGYTLLTGVFIGIGGMLGVISGLVQWLPLAVLAPIIVYVSIDITTQAFQATPKQHAGAMVLGFLP
SVAYLLTIKAPGWIAPDQLVALTTKVDGHGLPELAVIFALGNGFIITAMLWIATVAAMIDGRLRRGAVCLLVAAGLTLFG
LIHSVDPRGGIYLPWSLQGLARVISWQFVGAYVALAATLLLLSLLSARKEALQ

Sequences:

>Translated_533_residues
MSAPSSRPAASPRWFVAGDLNGFFGLVVDNLSILGFIAMALVGIFQFPAEVVFGRMFPGTAFGVLVGNLLYTLMARRLAA
RTGRDDVTAMPLGLDAPTSIGMALLVLGPAFAGFKAQGLDPQAAAIATWKLGMAALVVIGLLKLVLSFVGEAVTRALPRA
ALLGSIAGIALVLMGLLPLLETLRSPVAGFVTLGLLLYVLLAKGRLPTKLPGVLVAFLIGTALYYGLALAGLGAPGFAVP
AWNPPQIVLPLPNLGFIDGLPATVAYLPLLLPFGVLMVVGGINVSESARAAGDDYRTRDILLVEALATLVAGVCGGVAQT
TPYIGQPAYKHMGARSGYTLLTGVFIGIGGMLGVISGLVQWLPLAVLAPIIVYVSIDITTQAFQATPKQHAGAMVLGFLP
SVAYLLTIKAPGWIAPDQLVALTTKVDGHGLPELAVIFALGNGFIITAMLWIATVAAMIDGRLRRGAVCLLVAAGLTLFG
LIHSVDPRGGIYLPWSLQGLARVISWQFVGAYVALAATLLLLSLLSARKEALQ
>Mature_532_residues
SAPSSRPAASPRWFVAGDLNGFFGLVVDNLSILGFIAMALVGIFQFPAEVVFGRMFPGTAFGVLVGNLLYTLMARRLAAR
TGRDDVTAMPLGLDAPTSIGMALLVLGPAFAGFKAQGLDPQAAAIATWKLGMAALVVIGLLKLVLSFVGEAVTRALPRAA
LLGSIAGIALVLMGLLPLLETLRSPVAGFVTLGLLLYVLLAKGRLPTKLPGVLVAFLIGTALYYGLALAGLGAPGFAVPA
WNPPQIVLPLPNLGFIDGLPATVAYLPLLLPFGVLMVVGGINVSESARAAGDDYRTRDILLVEALATLVAGVCGGVAQTT
PYIGQPAYKHMGARSGYTLLTGVFIGIGGMLGVISGLVQWLPLAVLAPIIVYVSIDITTQAFQATPKQHAGAMVLGFLPS
VAYLLTIKAPGWIAPDQLVALTTKVDGHGLPELAVIFALGNGFIITAMLWIATVAAMIDGRLRRGAVCLLVAAGLTLFGL
IHSVDPRGGIYLPWSLQGLARVISWQFVGAYVALAATLLLLSLLSARKEALQ

Specific function: Unknown

COG id: COG2252

COG function: function code R; Permeases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 55326; Mature: 55195

Theoretical pI: Translated: 9.89; Mature: 9.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAPSSRPAASPRWFVAGDLNGFFGLVVDNLSILGFIAMALVGIFQFPAEVVFGRMFPGT
CCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH
AFGVLVGNLLYTLMARRLAARTGRDDVTAMPLGLDAPTSIGMALLVLGPAFAGFKAQGLD
HHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCC
PQAAAIATWKLGMAALVVIGLLKLVLSFVGEAVTRALPRAALLGSIAGIALVLMGLLPLL
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ETLRSPVAGFVTLGLLLYVLLAKGRLPTKLPGVLVAFLIGTALYYGLALAGLGAPGFAVP
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
AWNPPQIVLPLPNLGFIDGLPATVAYLPLLLPFGVLMVVGGINVSESARAAGDDYRTRDI
CCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCCCHHHH
LLVEALATLVAGVCGGVAQTTPYIGQPAYKHMGARSGYTLLTGVFIGIGGMLGVISGLVQ
HHHHHHHHHHHHHHCCHHHCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
WLPLAVLAPIIVYVSIDITTQAFQATPKQHAGAMVLGFLPSVAYLLTIKAPGWIAPDQLV
HHHHHHHHHHHHHHEECCCHHHHHCCCHHHCCHHHHHHHHHHHHHEEECCCCCCCCCHHE
ALTTKVDGHGLPELAVIFALGNGFIITAMLWIATVAAMIDGRLRRGAVCLLVAAGLTLFG
EEEEECCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHH
LIHSVDPRGGIYLPWSLQGLARVISWQFVGAYVALAATLLLLSLLSARKEALQ
HHHCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SAPSSRPAASPRWFVAGDLNGFFGLVVDNLSILGFIAMALVGIFQFPAEVVFGRMFPGT
CCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH
AFGVLVGNLLYTLMARRLAARTGRDDVTAMPLGLDAPTSIGMALLVLGPAFAGFKAQGLD
HHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCC
PQAAAIATWKLGMAALVVIGLLKLVLSFVGEAVTRALPRAALLGSIAGIALVLMGLLPLL
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ETLRSPVAGFVTLGLLLYVLLAKGRLPTKLPGVLVAFLIGTALYYGLALAGLGAPGFAVP
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
AWNPPQIVLPLPNLGFIDGLPATVAYLPLLLPFGVLMVVGGINVSESARAAGDDYRTRDI
CCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCCCHHHH
LLVEALATLVAGVCGGVAQTTPYIGQPAYKHMGARSGYTLLTGVFIGIGGMLGVISGLVQ
HHHHHHHHHHHHHHCCHHHCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
WLPLAVLAPIIVYVSIDITTQAFQATPKQHAGAMVLGFLPSVAYLLTIKAPGWIAPDQLV
HHHHHHHHHHHHHHEECCCHHHHHCCCHHHCCHHHHHHHHHHHHHEEECCCCCCCCCHHE
ALTTKVDGHGLPELAVIFALGNGFIITAMLWIATVAAMIDGRLRRGAVCLLVAAGLTLFG
EEEEECCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHH
LIHSVDPRGGIYLPWSLQGLARVISWQFVGAYVALAATLLLLSLLSARKEALQ
HHHCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA