| Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
|---|---|
| Accession | NC_007705 |
| Length | 4,940,217 |
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The map label for this gene is 84623141
Identifier: 84623141
GI number: 84623141
Start: 1624941
End: 1625321
Strand: Direct
Name: 84623141
Synonym: XOO_1484
Alternate gene names: NA
Gene position: 1624941-1625321 (Clockwise)
Preceding gene: 84623140
Following gene: 84623147
Centisome position: 32.89
GC content: 64.04
Gene sequence:
>381_bases ATGAGGGCTGGCTTGAACCGAACTGATCAATCGCTCAATACGCCGCATGCTGCGCCCGCCACCATCGTCTTCGATGGCGT GTGCCTGCTGTGCAACGGCTGGGTCAAGTTTCTGCTGCGGCACGATCGGCGTGCGCGCTATCGCTTTGCGGCCATGCAGG GCCAGGCCGGGCGTGCGCTGTTGCAGCAGCATGGTCTGGACCCGGACGACCCGTTGTCGTTCCTGCTGGTGAACCACAGT GGCGCATGGAGCGATAGCGATGCCCTCGTACGCGTGCTGGCGGGCTTGGGCGGCCTGTGGCGGTTTGCGGCGGTTTGCGG CGGTGTTGTGCATGATTCCGCGTGGCTTACGCGATATCGGGTATCGCCTCATCGCGCGTAA
Upstream 100 bases:
>100_bases CGCTGGTTCCGGCAGGTGCGTTGCCGCGAACACGCCGATAGCGACCGTTACGGATTCCTGGTCGACGTGCACTTGCCGCT GGTAGGGCCGTTCATTCGCT
Downstream 100 bases:
>100_bases CCGCTATCGCTGGCCCAACTCGTAACCGTGTCGACTGCAACCGAACACGGTCGACGTCCGATGCTTCATACCTTTGCAGG CACGGCGGTTTCGATCGCAC
Product: hypothetical protein
Products: NA
Alternate protein names: Transmembrane Protein
Number of amino acids: Translated: 126; Mature: 126
Protein sequence:
>126_residues MRAGLNRTDQSLNTPHAAPATIVFDGVCLLCNGWVKFLLRHDRRARYRFAAMQGQAGRALLQQHGLDPDDPLSFLLVNHS GAWSDSDALVRVLAGLGGLWRFAAVCGGVVHDSAWLTRYRVSPHRA
Sequences:
>Translated_126_residues MRAGLNRTDQSLNTPHAAPATIVFDGVCLLCNGWVKFLLRHDRRARYRFAAMQGQAGRALLQQHGLDPDDPLSFLLVNHS GAWSDSDALVRVLAGLGGLWRFAAVCGGVVHDSAWLTRYRVSPHRA >Mature_126_residues MRAGLNRTDQSLNTPHAAPATIVFDGVCLLCNGWVKFLLRHDRRARYRFAAMQGQAGRALLQQHGLDPDDPLSFLLVNHS GAWSDSDALVRVLAGLGGLWRFAAVCGGVVHDSAWLTRYRVSPHRA
Specific function: Unknown
COG id: COG3011
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13861; Mature: 13861
Theoretical pI: Translated: 10.04; Mature: 10.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRAGLNRTDQSLNTPHAAPATIVFDGVCLLCNGWVKFLLRHDRRARYRFAAMQGQAGRAL CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCHHHHH LQQHGLDPDDPLSFLLVNHSGAWSDSDALVRVLAGLGGLWRFAAVCGGVVHDSAWLTRYR HHHCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHCHHHHHHCC VSPHRA CCCCCC >Mature Secondary Structure MRAGLNRTDQSLNTPHAAPATIVFDGVCLLCNGWVKFLLRHDRRARYRFAAMQGQAGRAL CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCHHHHH LQQHGLDPDDPLSFLLVNHSGAWSDSDALVRVLAGLGGLWRFAAVCGGVVHDSAWLTRYR HHHCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHCHHHHHHCC VSPHRA CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA