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The map label for this gene is speE [H]

Identifier: 84623128

GI number: 84623128

Start: 1608979

End: 1610502

Strand: Direct

Name: speE [H]

Synonym: XOO_1471

Alternate gene names: 84623128

Gene position: 1608979-1610502 (Clockwise)

Preceding gene: 84623127

Following gene: 84623129

Centisome position: 32.57

GC content: 61.35

Gene sequence:

>1524_bases
GTGTCTGGTACGGAGGGCGGCGGCATGAGCTTGAAATGGATGCCGCGGGGTGTTGCTTTCCTTGTGGGCGCGGCGAGTCT
GGTGCAGGAGGTGCTGTGGGTGCGGCTTGCGGGATTCGCGACCGGTGGTCTGCCAGAGACATTCGCGACGATCCTTGCGT
TGTATCTTCTGGGTATCGCGGTAGGAGCGCAGCTGGGGCGTCGTCTGTGCGTTGGCCGGGTCCTGGACATCAGGCGTCGC
GCGTCGCTCGTCCTGTTGCTGTCCGCGCTGGTTGATATCGCTGCCCCTTTCCTGTTTTCTTGGGGGATCGGTTTTCTTCC
CGTGACTGTCGCAATGCTGCCTCTGGTGATCGCAACGGCTGCGCTGAAGAGCGCATTGTTCCCGGTGGTGCACCATCTGG
GCAGCAATGATGCAGTGGCATGGAAAGGCGGGTCGTTCTCCAAGGTCTACTTCGCCAATGTGGCGGGATGCACCCTCGGT
CCACTGATCGTCACGCTCTGGCTGATGGACGTGATGGCGATGGAGCAGCTTTTCGTCGGTGTCGCCACTGTCACCGCGGT
GGCAGGGATGTGGCTGGCCGGCCTTCGCCTACTGGCGGTGCCTGCAGTGGTGGTCGCGATTGCGGCACTTGTACTCCAGC
CTGCATTGCCAGCGCTTGCCAGCCGCATCGTGATGGCGACGGGGGGGGCTCAGGCCGACTGGCTGCTGGAGCGCAAGGAA
GGAATCATCCATACGATCGCCGACCCACAGGGAGACATCGTATTTGGCGGCAATGTGTACGACGGGCGCATCAACGTCGA
TCTGCGATCGAACAGCAACAAGATCGATCGTGTCTATGCCGCCATGGCGGCTGTGCCGAATCCCAAGCGTGTGCTCGTGA
TCGGTCTTGGCGGAGGCAGCTGGACGCGTGTGATTGCATCATTCCCGACTGTGGACCGCGTGGACGTTGTCGAGATCAAT
CCGGGCTATCTCGAGTTGATCGCCGGTCACCCACAGGTCGCACCGATCCTGCAGGATCCGCGTGTCCACATCCATATCGA
CGACGGTCGTCGCTGGTTGAGGGCACAAGGGGGGGCGCGCTACGATGCGATCGTGGTAAACAGTACGTTCCACTGGCGTT
CTGGTGCAACGACGCTGCTCTCGCAGGAGTTCTTTCGCCTGGTTGGCGCGCATCTGTCCGATTCAGGCGTCGCGTTGGTG
AATGCCACCGGGTCTCCAGAGGTCCTCAAGACGGCAGCTTCGGAGTTTCCGCAGGCCTATCTGTTTGGCAACAGTGTCAT
CATGTCACGACGCGACTTCCGCGATACGCTTCGCGCTGGTGGCGAAGCCATTTACGCGACCCGAATGCATGGGCGGCCGG
TCTTTGATCCGGCCAATGCGTCTGATGCGGCCGCTGTGCGGAAGGTCACCGCGGCCGATCTCGTAGGTGTTGATGTGGTG
GAAGAGCGGGCCGGGCGACCAGTCGAGGTCAATACTGACCTGAGGATGTTGACCGAGTATAAATATGGGGCATCGTCCCG
ATGA

Upstream 100 bases:

>100_bases
GGGCCATCGGGACCGGTCTTTATCTTTTTCATATCATGGACTTGCGGCAGGTCACCTGGCTGGCGGCAGCCATCAATGCA
ATGGTCGCACTCGGCGGATG

Downstream 100 bases:

>100_bases
TCGGGAAGATGGGGACATCAGCGGGAATCAAACGATGAATTCAGTATCTACAACCAACCTCGTTGGCATCACCGGCATCG
CTCGTCGCCTTGTGCAGGAT

Product: hypothetical protein

Products: NA

Alternate protein names: Putrescine aminopropyltransferase; PAPT; SPDSY [H]

Number of amino acids: Translated: 507; Mature: 506

Protein sequence:

>507_residues
MSGTEGGGMSLKWMPRGVAFLVGAASLVQEVLWVRLAGFATGGLPETFATILALYLLGIAVGAQLGRRLCVGRVLDIRRR
ASLVLLLSALVDIAAPFLFSWGIGFLPVTVAMLPLVIATAALKSALFPVVHHLGSNDAVAWKGGSFSKVYFANVAGCTLG
PLIVTLWLMDVMAMEQLFVGVATVTAVAGMWLAGLRLLAVPAVVVAIAALVLQPALPALASRIVMATGGAQADWLLERKE
GIIHTIADPQGDIVFGGNVYDGRINVDLRSNSNKIDRVYAAMAAVPNPKRVLVIGLGGGSWTRVIASFPTVDRVDVVEIN
PGYLELIAGHPQVAPILQDPRVHIHIDDGRRWLRAQGGARYDAIVVNSTFHWRSGATTLLSQEFFRLVGAHLSDSGVALV
NATGSPEVLKTAASEFPQAYLFGNSVIMSRRDFRDTLRAGGEAIYATRMHGRPVFDPANASDAAAVRKVTAADLVGVDVV
EERAGRPVEVNTDLRMLTEYKYGASSR

Sequences:

>Translated_507_residues
MSGTEGGGMSLKWMPRGVAFLVGAASLVQEVLWVRLAGFATGGLPETFATILALYLLGIAVGAQLGRRLCVGRVLDIRRR
ASLVLLLSALVDIAAPFLFSWGIGFLPVTVAMLPLVIATAALKSALFPVVHHLGSNDAVAWKGGSFSKVYFANVAGCTLG
PLIVTLWLMDVMAMEQLFVGVATVTAVAGMWLAGLRLLAVPAVVVAIAALVLQPALPALASRIVMATGGAQADWLLERKE
GIIHTIADPQGDIVFGGNVYDGRINVDLRSNSNKIDRVYAAMAAVPNPKRVLVIGLGGGSWTRVIASFPTVDRVDVVEIN
PGYLELIAGHPQVAPILQDPRVHIHIDDGRRWLRAQGGARYDAIVVNSTFHWRSGATTLLSQEFFRLVGAHLSDSGVALV
NATGSPEVLKTAASEFPQAYLFGNSVIMSRRDFRDTLRAGGEAIYATRMHGRPVFDPANASDAAAVRKVTAADLVGVDVV
EERAGRPVEVNTDLRMLTEYKYGASSR
>Mature_506_residues
SGTEGGGMSLKWMPRGVAFLVGAASLVQEVLWVRLAGFATGGLPETFATILALYLLGIAVGAQLGRRLCVGRVLDIRRRA
SLVLLLSALVDIAAPFLFSWGIGFLPVTVAMLPLVIATAALKSALFPVVHHLGSNDAVAWKGGSFSKVYFANVAGCTLGP
LIVTLWLMDVMAMEQLFVGVATVTAVAGMWLAGLRLLAVPAVVVAIAALVLQPALPALASRIVMATGGAQADWLLERKEG
IIHTIADPQGDIVFGGNVYDGRINVDLRSNSNKIDRVYAAMAAVPNPKRVLVIGLGGGSWTRVIASFPTVDRVDVVEINP
GYLELIAGHPQVAPILQDPRVHIHIDDGRRWLRAQGGARYDAIVVNSTFHWRSGATTLLSQEFFRLVGAHLSDSGVALVN
ATGSPEVLKTAASEFPQAYLFGNSVIMSRRDFRDTLRAGGEAIYATRMHGRPVFDPANASDAAAVRKVTAADLVGVDVVE
ERAGRPVEVNTDLRMLTEYKYGASSR

Specific function: Catalyzes the production of spermidine from putrescine and decarboxylated S-adenosylmethionine (dcSAM), which serves as an aminopropyl donor [H]

COG id: COG0421

COG function: function code E; Spermidine synthase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the spermidine/spermine synthase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001045 [H]

Pfam domain/function: PF01564 Spermine_synth [H]

EC number: =2.5.1.16 [H]

Molecular weight: Translated: 53962; Mature: 53830

Theoretical pI: Translated: 9.46; Mature: 9.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGTEGGGMSLKWMPRGVAFLVGAASLVQEVLWVRLAGFATGGLPETFATILALYLLGIA
CCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
VGAQLGRRLCVGRVLDIRRRASLVLLLSALVDIAAPFLFSWGIGFLPVTVAMLPLVIATA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
ALKSALFPVVHHLGSNDAVAWKGGSFSKVYFANVAGCTLGPLIVTLWLMDVMAMEQLFVG
HHHHHHHHHHHHCCCCCEEEECCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHH
VATVTAVAGMWLAGLRLLAVPAVVVAIAALVLQPALPALASRIVMATGGAQADWLLERKE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHEEECCCCCHHHHHHHCC
GIIHTIADPQGDIVFGGNVYDGRINVDLRSNSNKIDRVYAAMAAVPNPKRVLVIGLGGGS
CCEEEECCCCCCEEECCEEECCEEEEEECCCCCHHHHHHHHHHCCCCCCEEEEEEECCCH
WTRVIASFPTVDRVDVVEINPGYLELIAGHPQVAPILQDPRVHIHIDDGRRWLRAQGGAR
HHHHHHCCCCCCCEEEEEECCCEEEEECCCCCCCCCCCCCEEEEEECCCCHHHHHCCCCC
YDAIVVNSTFHWRSGATTLLSQEFFRLVGAHLSDSGVALVNATGSPEVLKTAASEFPQAY
EEEEEEECEEEECCCCHHHHHHHHHHHHCCCCCCCCEEEEECCCCHHHHHHHHHHCCEEE
LFGNSVIMSRRDFRDTLRAGGEAIYATRMHGRPVFDPANASDAAAVRKVTAADLVGVDVV
EECCCCEECHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
EERAGRPVEVNTDLRMLTEYKYGASSR
HHHCCCCEEECCCHHHHHHCCCCCCCC
>Mature Secondary Structure 
SGTEGGGMSLKWMPRGVAFLVGAASLVQEVLWVRLAGFATGGLPETFATILALYLLGIA
CCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
VGAQLGRRLCVGRVLDIRRRASLVLLLSALVDIAAPFLFSWGIGFLPVTVAMLPLVIATA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
ALKSALFPVVHHLGSNDAVAWKGGSFSKVYFANVAGCTLGPLIVTLWLMDVMAMEQLFVG
HHHHHHHHHHHHCCCCCEEEECCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHH
VATVTAVAGMWLAGLRLLAVPAVVVAIAALVLQPALPALASRIVMATGGAQADWLLERKE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHEEECCCCCHHHHHHHCC
GIIHTIADPQGDIVFGGNVYDGRINVDLRSNSNKIDRVYAAMAAVPNPKRVLVIGLGGGS
CCEEEECCCCCCEEECCEEECCEEEEEECCCCCHHHHHHHHHHCCCCCCEEEEEEECCCH
WTRVIASFPTVDRVDVVEINPGYLELIAGHPQVAPILQDPRVHIHIDDGRRWLRAQGGAR
HHHHHHCCCCCCCEEEEEECCCEEEEECCCCCCCCCCCCCEEEEEECCCCHHHHHCCCCC
YDAIVVNSTFHWRSGATTLLSQEFFRLVGAHLSDSGVALVNATGSPEVLKTAASEFPQAY
EEEEEEECEEEECCCCHHHHHHHHHHHHCCCCCCCCEEEEECCCCHHHHHHHHHHCCEEE
LFGNSVIMSRRDFRDTLRAGGEAIYATRMHGRPVFDPANASDAAAVRKVTAADLVGVDVV
EECCCCEECHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
EERAGRPVEVNTDLRMLTEYKYGASSR
HHHCCCCEEECCCHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA