| Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
|---|---|
| Accession | NC_007705 |
| Length | 4,940,217 |
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The map label for this gene is yhcX [H]
Identifier: 84623048
GI number: 84623048
Start: 1518802
End: 1519539
Strand: Direct
Name: yhcX [H]
Synonym: XOO_1391
Alternate gene names: 84623048
Gene position: 1518802-1519539 (Clockwise)
Preceding gene: 84623046
Following gene: 84623049
Centisome position: 30.74
GC content: 65.58
Gene sequence:
>738_bases TTGCGAATCAGAGTTGAAGCCGCCGCCGGCCTGCCCGAATCGCTGGCGGCCATCCAGGCGCTGCGTGGGCAATGGCTGGA ACTGTTTGCCGGATTGGCGCAGGAACATCGGCTGCATCTGATTGCCGGCAGCTTTTTGCTGGATCTGGGGCAGGGCCGCT ACCGTAATCGCAGCGACTGGTTGACGCCCGAGGGCCTGCATGGCTGGCAAGACAAGGTGCAGCTCACCGGCTTCGAAAAA GCCACCGGGCTGATCGAGCCGGGCGATGCACTGAAGGTGTTCGAACTGGACGGCATCCGCGCAGCGATTGCGATCTGCTA CGACAGCGAATTTCCGCTGCCGGTGCGTGCGCAATACGAGGCCGGCGCGCGTTTGTTGATCGTACCCAGTTGCACCGACA CCGCGGCCGGCGCCATGCGCGTGCGCATCGGTTGCCTGGCGCGCGCGCTGGAAAACCGCGTGTTCGTTGCGCAATCGGTG ACCGCGGGCGAAGCGCTATGGAGCCCAGTGTTGGACATCAACTCCGGCGAGGCGGCGGTGTTTGCGCCGATGGATGTCGG CTTTCCCGCCGATGGCGTGCTGGCGCAGACCCAGGGCGAGACAGTGTGGGCACTGGCCGAATTGGACTTCGCTGCGTTCG ATGCCAGCCGCGCGCAGGCACAGGTGGCCAACGACCGCGATTGGCCAGGGCAGTTGGCGGCCGATGTGGCGCGTGCCAAG CTGGCCGCGTTCGGTTGA
Upstream 100 bases:
>100_bases TCGTTCCGACAGGTCCAGGCGGCTGGAGGACATAGGCAACTCCACTTGGCAATGAAGTCGCTCAGGTCAGGTCGCCTGGA CCACTTCACAAGCGTTGGTG
Downstream 100 bases:
>100_bases TTCATCACCCACTGGTTCCCAATGGCCAAGAAAACCCTGATTCCGTATAGCGTTCGGCGCGAATTGGCGCCCGGTGCGCT GGTGCACAGCAATCTGTCCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 245; Mature: 245
Protein sequence:
>245_residues MRIRVEAAAGLPESLAAIQALRGQWLELFAGLAQEHRLHLIAGSFLLDLGQGRYRNRSDWLTPEGLHGWQDKVQLTGFEK ATGLIEPGDALKVFELDGIRAAIAICYDSEFPLPVRAQYEAGARLLIVPSCTDTAAGAMRVRIGCLARALENRVFVAQSV TAGEALWSPVLDINSGEAAVFAPMDVGFPADGVLAQTQGETVWALAELDFAAFDASRAQAQVANDRDWPGQLAADVARAK LAAFG
Sequences:
>Translated_245_residues MRIRVEAAAGLPESLAAIQALRGQWLELFAGLAQEHRLHLIAGSFLLDLGQGRYRNRSDWLTPEGLHGWQDKVQLTGFEK ATGLIEPGDALKVFELDGIRAAIAICYDSEFPLPVRAQYEAGARLLIVPSCTDTAAGAMRVRIGCLARALENRVFVAQSV TAGEALWSPVLDINSGEAAVFAPMDVGFPADGVLAQTQGETVWALAELDFAAFDASRAQAQVANDRDWPGQLAADVARAK LAAFG >Mature_245_residues MRIRVEAAAGLPESLAAIQALRGQWLELFAGLAQEHRLHLIAGSFLLDLGQGRYRNRSDWLTPEGLHGWQDKVQLTGFEK ATGLIEPGDALKVFELDGIRAAIAICYDSEFPLPVRAQYEAGARLLIVPSCTDTAAGAMRVRIGCLARALENRVFVAQSV TAGEALWSPVLDINSGEAAVFAPMDVGFPADGVLAQTQGETVWALAELDFAAFDASRAQAQVANDRDWPGQLAADVARAK LAAFG
Specific function: Unknown
COG id: COG0388
COG function: function code R; Predicted amidohydrolase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 N-acetyltransferase domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000182 - InterPro: IPR016181 - InterPro: IPR003010 - InterPro: IPR001110 [H]
Pfam domain/function: PF00583 Acetyltransf_1; PF00795 CN_hydrolase [H]
EC number: NA
Molecular weight: Translated: 26257; Mature: 26257
Theoretical pI: Translated: 4.61; Mature: 4.61
Prosite motif: PS50263 CN_HYDROLASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRIRVEAAAGLPESLAAIQALRGQWLELFAGLAQEHRLHLIAGSFLLDLGQGRYRNRSDW CEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEEHHHHHHCCCCCCCCCCCC LTPEGLHGWQDKVQLTGFEKATGLIEPGDALKVFELDGIRAAIAICYDSEFPLPVRAQYE CCCCCCCCCCCCEEEECCHHHCCCCCCCCCEEEEEECCCEEEEEEEECCCCCCCEEEECC AGARLLIVPSCTDTAAGAMRVRIGCLARALENRVFVAQSVTAGEALWSPVLDINSGEAAV CCCEEEEEECCCCCCCCHHHHHHHHHHHHHHCCEEEEECCCCCHHHHCCCEECCCCCEEE FAPMDVGFPADGVLAQTQGETVWALAELDFAAFDASRAQAQVANDRDWPGQLAADVARAK EEECCCCCCCCCEEEECCCCEEEEEEECCHHHHCCHHHHHHHCCCCCCCHHHHHHHHHHH LAAFG HHCCC >Mature Secondary Structure MRIRVEAAAGLPESLAAIQALRGQWLELFAGLAQEHRLHLIAGSFLLDLGQGRYRNRSDW CEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEEHHHHHHCCCCCCCCCCCC LTPEGLHGWQDKVQLTGFEKATGLIEPGDALKVFELDGIRAAIAICYDSEFPLPVRAQYE CCCCCCCCCCCCEEEECCHHHCCCCCCCCCEEEEEECCCEEEEEEEECCCCCCCEEEECC AGARLLIVPSCTDTAAGAMRVRIGCLARALENRVFVAQSVTAGEALWSPVLDINSGEAAV CCCEEEEEECCCCCCCCHHHHHHHHHHHHHHCCEEEEECCCCCHHHHCCCEECCCCCEEE FAPMDVGFPADGVLAQTQGETVWALAELDFAAFDASRAQAQVANDRDWPGQLAADVARAK EEECCCCCCCCCEEEECCCCEEEEEEECCHHHHCCHHHHHHHCCCCCCCHHHHHHHHHHH LAAFG HHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8969498; 9384377 [H]