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The map label for this gene is ymdC [H]

Identifier: 84623022

GI number: 84623022

Start: 1489457

End: 1490530

Strand: Direct

Name: ymdC [H]

Synonym: XOO_1365

Alternate gene names: 84623022

Gene position: 1489457-1490530 (Clockwise)

Preceding gene: 84623021

Following gene: 84623035

Centisome position: 30.15

GC content: 65.18

Gene sequence:

>1074_bases
ATGCGCGGTGCGGAAATGGTGCTGCGCATGTTCAGCATCAACCGTCGCATGCACAACAAAGCCTGGATCGCCGATGGCCG
CATCGCGGTGGTGGGTGGACGCAATGTGGGCGACGAATATTTCGATGCGGCGCGCGACACCAACTTCATGGACATGGATG
CCGCGCTGATGGGGCCGGCAGTGGGCCAGGCCGAGCAGGTGTTCGATGCGTACTGGAACAGCCCCAACGCCTTGCCGCTG
TCTGCGCTGGTCACCGCAAAGCCGCAGGCGCTGGAGGCGTTGCGTGTCAGCCTGGATGCCGGCACGGCATCGTCGCGCGC
GCATCCGTATGTGGAGCGCTTGCAGCGTTCGCCCAGCGTGCGCGAACTGATGCAGGGCGACCGCCTGGTGCATTGGCTGT
CGCAGGCGCGCATCGTCTCCGACCCGCCGGAAAAAGCCGAAGGCGCGCCGCCGCAGGCCGACTGGATGACGCCGGTGCTG
ATCGGCGAAATGGCGCACGCGCAGCACGCGCTCAAGGTGATTTCGCCCTACTTCGTGCCGGGCGACGAAGGCATGCGCTG
GATCGGCAACCTGCGCCAGCGCAATGTGCGCGTGAGTATCCTGACCAACTCGCTGGCGGCCAACGATGTGGTGGCGGTGC
ACAGCGGTTACGCCGACTCTCGCATGCCGCTGTTGCAGCGGGGCGTGTGTCTGCATGAGCTCAAGCCGATGGGCGAGCCG
GACGGCAGCCTGTTCGGTTCCAGCGGTGCCAGCTTGCACACCAAGGCGTTTGTTGTGGACGACAGCAGCGGCTTTATCGG
CTCGTTCAACCTCGACCCGCGTTCGATGAACCTCAATACCGGGATGGGCCTGCTGTTCAATGATCGGCTGGTCACCGCAG
AACTGGAGCGGCTGTACAACCACAAGGTCAGTGCAGCGGTGAGTTACCGCGTGACCCTGGACCAGGGCACGCTGCGTTGG
CACGACGATGCCGCTCAAGCGCCCGAAGTGTGGTCGCGCGAGCCGGGCGCAAGCATGTGGCGGCGTGACGCAGCGACGGT
GATGGGCTGGTTGCCGTTGGAGTCGCAGCTGTAG

Upstream 100 bases:

>100_bases
ATGAATATCCACGGCAGCGACTCGGTGCTGGCGGCATTGGACAGCCACCCGCTGATCGAGATCCGCCTGTTTAACCCGAC
CCGCGCGCGAGGGCACCTTG

Downstream 100 bases:

>100_bases
CGGTTTGATGAGCGTGTACCCTCATCCGCCCGCCGGGCACTTCTTCCGCAGACGGGAGATAAGGAATGTGGTGGCCATCC
ATTGATGGGAGAAACGCGCG

Product: putative cardiolipin synthase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 357; Mature: 357

Protein sequence:

>357_residues
MRGAEMVLRMFSINRRMHNKAWIADGRIAVVGGRNVGDEYFDAARDTNFMDMDAALMGPAVGQAEQVFDAYWNSPNALPL
SALVTAKPQALEALRVSLDAGTASSRAHPYVERLQRSPSVRELMQGDRLVHWLSQARIVSDPPEKAEGAPPQADWMTPVL
IGEMAHAQHALKVISPYFVPGDEGMRWIGNLRQRNVRVSILTNSLAANDVVAVHSGYADSRMPLLQRGVCLHELKPMGEP
DGSLFGSSGASLHTKAFVVDDSSGFIGSFNLDPRSMNLNTGMGLLFNDRLVTAELERLYNHKVSAAVSYRVTLDQGTLRW
HDDAAQAPEVWSREPGASMWRRDAATVMGWLPLESQL

Sequences:

>Translated_357_residues
MRGAEMVLRMFSINRRMHNKAWIADGRIAVVGGRNVGDEYFDAARDTNFMDMDAALMGPAVGQAEQVFDAYWNSPNALPL
SALVTAKPQALEALRVSLDAGTASSRAHPYVERLQRSPSVRELMQGDRLVHWLSQARIVSDPPEKAEGAPPQADWMTPVL
IGEMAHAQHALKVISPYFVPGDEGMRWIGNLRQRNVRVSILTNSLAANDVVAVHSGYADSRMPLLQRGVCLHELKPMGEP
DGSLFGSSGASLHTKAFVVDDSSGFIGSFNLDPRSMNLNTGMGLLFNDRLVTAELERLYNHKVSAAVSYRVTLDQGTLRW
HDDAAQAPEVWSREPGASMWRRDAATVMGWLPLESQL
>Mature_357_residues
MRGAEMVLRMFSINRRMHNKAWIADGRIAVVGGRNVGDEYFDAARDTNFMDMDAALMGPAVGQAEQVFDAYWNSPNALPL
SALVTAKPQALEALRVSLDAGTASSRAHPYVERLQRSPSVRELMQGDRLVHWLSQARIVSDPPEKAEGAPPQADWMTPVL
IGEMAHAQHALKVISPYFVPGDEGMRWIGNLRQRNVRVSILTNSLAANDVVAVHSGYADSRMPLLQRGVCLHELKPMGEP
DGSLFGSSGASLHTKAFVVDDSSGFIGSFNLDPRSMNLNTGMGLLFNDRLVTAELERLYNHKVSAAVSYRVTLDQGTLRW
HDDAAQAPEVWSREPGASMWRRDAATVMGWLPLESQL

Specific function: Unknown

COG id: COG1502

COG function: function code I; Phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthases and related enzymes

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 PLD phosphodiesterase domains [H]

Homologues:

Organism=Escherichia coli, GI87081826, Length=349, Percent_Identity=36.3896848137536, Blast_Score=220, Evalue=1e-58,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001736 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 39304; Mature: 39304

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: PS50035 PLD

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
4.8 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
4.8 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRGAEMVLRMFSINRRMHNKAWIADGRIAVVGGRNVGDEYFDAARDTNFMDMDAALMGPA
CCHHHHHHHHHHHHHHHCCCEEEECCEEEEEECCCCCHHHHHHHCCCCCEECCHHHHCCC
VGQAEQVFDAYWNSPNALPLSALVTAKPQALEALRVSLDAGTASSRAHPYVERLQRSPSV
CCHHHHHHHHHCCCCCCCCHHHEECCCHHHHHHHHHEECCCCCCCCCCHHHHHHHCCCCH
RELMQGDRLVHWLSQARIVSDPPEKAEGAPPQADWMTPVLIGEMAHAQHALKVISPYFVP
HHHHCCHHHHHHHHHCCCCCCCCHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCC
GDEGMRWIGNLRQRNVRVSILTNSLAANDVVAVHSGYADSRMPLLQRGVCLHELKPMGEP
CCCHHHHHHHHHHCCEEEEEEECCCCCCCEEEEECCCCCCCCHHHHHCCHHHHHCCCCCC
DGSLFGSSGASLHTKAFVVDDSSGFIGSFNLDPRSMNLNTGMGLLFNDRLVTAELERLYN
CCCEECCCCCCEEEEEEEEECCCCCEEEECCCCCCEECCCCCCEEECCCCHHHHHHHHHC
HKVSAAVSYRVTLDQGTLRWHDDAAQAPEVWSREPGASMWRRDAATVMGWLPLESQL
CHHEEEEEEEEEECCCCEEECCCCCCCCHHHCCCCCHHHHHHHHHHHEEECCCCCCC
>Mature Secondary Structure
MRGAEMVLRMFSINRRMHNKAWIADGRIAVVGGRNVGDEYFDAARDTNFMDMDAALMGPA
CCHHHHHHHHHHHHHHHCCCEEEECCEEEEEECCCCCHHHHHHHCCCCCEECCHHHHCCC
VGQAEQVFDAYWNSPNALPLSALVTAKPQALEALRVSLDAGTASSRAHPYVERLQRSPSV
CCHHHHHHHHHCCCCCCCCHHHEECCCHHHHHHHHHEECCCCCCCCCCHHHHHHHCCCCH
RELMQGDRLVHWLSQARIVSDPPEKAEGAPPQADWMTPVLIGEMAHAQHALKVISPYFVP
HHHHCCHHHHHHHHHCCCCCCCCHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCC
GDEGMRWIGNLRQRNVRVSILTNSLAANDVVAVHSGYADSRMPLLQRGVCLHELKPMGEP
CCCHHHHHHHHHHCCEEEEEEECCCCCCCEEEEECCCCCCCCHHHHHCCHHHHHCCCCCC
DGSLFGSSGASLHTKAFVVDDSSGFIGSFNLDPRSMNLNTGMGLLFNDRLVTAELERLYN
CCCEECCCCCCEEEEEEEEECCCCCEEEECCCCCCEECCCCCCEEECCCCHHHHHHHHHC
HKVSAAVSYRVTLDQGTLRWHDDAAQAPEVWSREPGASMWRRDAATVMGWLPLESQL
CHHEEEEEEEEEECCCCEEECCCCCCCCHHHCCCCCHHHHHHHHHHHEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]