| Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
|---|---|
| Accession | NC_007705 |
| Length | 4,940,217 |
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The map label for this gene is 84623014
Identifier: 84623014
GI number: 84623014
Start: 1479068
End: 1480348
Strand: Direct
Name: 84623014
Synonym: XOO_1357
Alternate gene names: NA
Gene position: 1479068-1480348 (Clockwise)
Preceding gene: 84623013
Following gene: 84623015
Centisome position: 29.94
GC content: 64.09
Gene sequence:
>1281_bases ATGAGCGACTTCAAACCTGGGTGGTATGCGGTCAAGCGCCTGCACGATGGCGCGGTGGACAACTGGTATTTCGAGACGCG GGAGCGGGTGACGCTGACCGCGCGCGTATTGCCCAATGGCGACCAGATCCTGCTTTTCCGTCCCACGCCACAGCAGCCTT ATCTGTCCAAGACCTGGTCGTCGGCCTACGAATGGTTGCCCACCGCCAAGCCCGGTGACCATTGGGACAACGACAAGTAC GGTGCGGTGGCCGACGGCAAGACCGAGTTGCCGGGCAAGTTCTCGCGCCGCCAGCGCAAGCCCAGCGCGCGCGAACTGAG CCAGCGCGCCAGCAAGGCCTGCTTCTCGTCGGTGGACGGCCTGAGCTGTACGCGCGAGATCCACGTGGGGATCTTCTTCG ATGGCACCAACAACAATATGGAGCGTGATCGCCCGGTGCAGGGGCACTCCAATATCGTCAGTCTCTACGACGCGCACAAG GAAGACAGGGTCGAGTATTTCCGTTATTACGTTCCTGGCGTCGGGACCAAGTTCAAGGAAATCGGTGAGCTTGCCGAGGA CGCCACCGGCAAGAGCATGGCCCGTGGCGGCGAGGATCGCATCCATTGGGCTTTGACGAGGCTCTATAACGCGGTCAATA CCTCGGTCAACGGCTTCGACTTGCTGGACGAGGCCGAAACCAAGGATCTGGTCACCGGGGTGTTCTCCGGCTTGCGCACC TGGTACCGGCTCGGCGATGGCAAGATGGAATCGATCTTCCGCGACCTGGACCGGCGCCTGCGCAAGCAGGTGGCCGACAA GCGGCCGACGATCACCACGCTGCATCTGTCGGTGTTCGGCTTCTCGCGCGGTGCGGCGCAGGCGCGGACCTTCTGCAACT GGCTGGCGCTGGCGACCGGCGGCAAGGTGGGGCCGGCGCAGGTCAACCTGCGCTTCCTCGGCCTCTACGACACGGTGGCC TCGGTGCTGCTGGCCGATTCGTCGCCGGTCGGCAGCGGCCTGTTCGACTGGGCCAACAAGACCATGCGCATCCCCGAGGT GGAAGCGGCGGTCCACTACGTGGCCGGGCACGAGATCCGGCGCTCGTTCCCGCTGTCCACCGTGCGCGCTGGCGGCAGTT GGCCGGCGAACACCAAGGAATACGTGTATCCCGGTGCGCACTCGGATATCGGCGGTGGCTATTCGCCTGGCGACCAAGGG AAGGCGCGCGGTGGCGGTCGAGCTTGTTGTCGCAGATCACCCTCAACGACATGTACTTCGAGGCTTGCAACAACGGCGTA A
Upstream 100 bases:
>100_bases GCCCCGATGCACCAGTCAAACCCGATAACTGGCCGCCGCTACCGCCGCCACCGATATTGCCGGACGCAAAATCCGAACAC ACCGATGCGGAGCATCAGCC
Downstream 100 bases:
>100_bases AGCTTTCTCCGTTGGATAAGCTCGAAGAAGAAAGCAAAGACGACTTCAAAATCGACCCCGCCCTCGAAACCGCTTTCTCC GCCTATCTCGATTGGACGCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 426; Mature: 425
Protein sequence:
>426_residues MSDFKPGWYAVKRLHDGAVDNWYFETRERVTLTARVLPNGDQILLFRPTPQQPYLSKTWSSAYEWLPTAKPGDHWDNDKY GAVADGKTELPGKFSRRQRKPSARELSQRASKACFSSVDGLSCTREIHVGIFFDGTNNNMERDRPVQGHSNIVSLYDAHK EDRVEYFRYYVPGVGTKFKEIGELAEDATGKSMARGGEDRIHWALTRLYNAVNTSVNGFDLLDEAETKDLVTGVFSGLRT WYRLGDGKMESIFRDLDRRLRKQVADKRPTITTLHLSVFGFSRGAAQARTFCNWLALATGGKVGPAQVNLRFLGLYDTVA SVLLADSSPVGSGLFDWANKTMRIPEVEAAVHYVAGHEIRRSFPLSTVRAGGSWPANTKEYVYPGAHSDIGGGYSPGDQG KARGGGRACCRRSPSTTCTSRLATTA
Sequences:
>Translated_426_residues MSDFKPGWYAVKRLHDGAVDNWYFETRERVTLTARVLPNGDQILLFRPTPQQPYLSKTWSSAYEWLPTAKPGDHWDNDKY GAVADGKTELPGKFSRRQRKPSARELSQRASKACFSSVDGLSCTREIHVGIFFDGTNNNMERDRPVQGHSNIVSLYDAHK EDRVEYFRYYVPGVGTKFKEIGELAEDATGKSMARGGEDRIHWALTRLYNAVNTSVNGFDLLDEAETKDLVTGVFSGLRT WYRLGDGKMESIFRDLDRRLRKQVADKRPTITTLHLSVFGFSRGAAQARTFCNWLALATGGKVGPAQVNLRFLGLYDTVA SVLLADSSPVGSGLFDWANKTMRIPEVEAAVHYVAGHEIRRSFPLSTVRAGGSWPANTKEYVYPGAHSDIGGGYSPGDQG KARGGGRACCRRSPSTTCTSRLATTA >Mature_425_residues SDFKPGWYAVKRLHDGAVDNWYFETRERVTLTARVLPNGDQILLFRPTPQQPYLSKTWSSAYEWLPTAKPGDHWDNDKYG AVADGKTELPGKFSRRQRKPSARELSQRASKACFSSVDGLSCTREIHVGIFFDGTNNNMERDRPVQGHSNIVSLYDAHKE DRVEYFRYYVPGVGTKFKEIGELAEDATGKSMARGGEDRIHWALTRLYNAVNTSVNGFDLLDEAETKDLVTGVFSGLRTW YRLGDGKMESIFRDLDRRLRKQVADKRPTITTLHLSVFGFSRGAAQARTFCNWLALATGGKVGPAQVNLRFLGLYDTVAS VLLADSSPVGSGLFDWANKTMRIPEVEAAVHYVAGHEIRRSFPLSTVRAGGSWPANTKEYVYPGAHSDIGGGYSPGDQGK ARGGGRACCRRSPSTTCTSRLATTA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47282; Mature: 47150
Theoretical pI: Translated: 9.54; Mature: 9.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDFKPGWYAVKRLHDGAVDNWYFETRERVTLTARVLPNGDQILLFRPTPQQPYLSKTWS CCCCCCHHHHHHHHHCCCCCCCEECCCCEEEEEEEECCCCCEEEEECCCCCCCHHHHHHH SAYEWLPTAKPGDHWDNDKYGAVADGKTELPGKFSRRQRKPSARELSQRASKACFSSVDG HHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHCCCC LSCTREIHVGIFFDGTNNNMERDRPVQGHSNIVSLYDAHKEDRVEYFRYYVPGVGTKFKE CCEEEEEEEEEEEECCCCCCCCCCCCCCCCCEEHHHHCCCHHHHHHHHHHCCCCCHHHHH IGELAEDATGKSMARGGEDRIHWALTRLYNAVNTSVNGFDLLDEAETKDLVTGVFSGLRT HHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHH WYRLGDGKMESIFRDLDRRLRKQVADKRPTITTLHLSVFGFSRGAAQARTFCNWLALATG HHHCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEECCCCHHHHHHHHHHHHHHCC GKVGPAQVNLRFLGLYDTVASVLLADSSPVGSGLFDWANKTMRIPEVEAAVHYVAGHEIR CCCCCCEEEEEEEEHHHHHHHHHHCCCCCCCCCHHHHCCCCCCCCHHHHHHHHHHHHHHH RSFPLSTVRAGGSWPANTKEYVYPGAHSDIGGGYSPGDQGKARGGGRACCRRSPSTTCTS HHCCCHHHCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCHHHH RLATTA HHHCCC >Mature Secondary Structure SDFKPGWYAVKRLHDGAVDNWYFETRERVTLTARVLPNGDQILLFRPTPQQPYLSKTWS CCCCCHHHHHHHHHCCCCCCCEECCCCEEEEEEEECCCCCEEEEECCCCCCCHHHHHHH SAYEWLPTAKPGDHWDNDKYGAVADGKTELPGKFSRRQRKPSARELSQRASKACFSSVDG HHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHCCCC LSCTREIHVGIFFDGTNNNMERDRPVQGHSNIVSLYDAHKEDRVEYFRYYVPGVGTKFKE CCEEEEEEEEEEEECCCCCCCCCCCCCCCCCEEHHHHCCCHHHHHHHHHHCCCCCHHHHH IGELAEDATGKSMARGGEDRIHWALTRLYNAVNTSVNGFDLLDEAETKDLVTGVFSGLRT HHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHH WYRLGDGKMESIFRDLDRRLRKQVADKRPTITTLHLSVFGFSRGAAQARTFCNWLALATG HHHCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEECCCCHHHHHHHHHHHHHHCC GKVGPAQVNLRFLGLYDTVASVLLADSSPVGSGLFDWANKTMRIPEVEAAVHYVAGHEIR CCCCCCEEEEEEEEHHHHHHHHHHCCCCCCCCCHHHHCCCCCCCCHHHHHHHHHHHHHHH RSFPLSTVRAGGSWPANTKEYVYPGAHSDIGGGYSPGDQGKARGGGRACCRRSPSTTCTS HHCCCHHHCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCHHHH RLATTA HHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA