Definition Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome.
Accession NC_007705
Length 4,940,217

Click here to switch to the map view.

The map label for this gene is 84622996

Identifier: 84622996

GI number: 84622996

Start: 1461046

End: 1461996

Strand: Direct

Name: 84622996

Synonym: XOO_1339

Alternate gene names: NA

Gene position: 1461046-1461996 (Clockwise)

Preceding gene: 84622995

Following gene: 84622998

Centisome position: 29.57

GC content: 47.21

Gene sequence:

>951_bases
ATGCTGATCAAAATATGCTTTCTGAAAGAAATCGTTACAGCGAATACATGGAGGTTAATGACGATGAACGATGATGTCAA
TGTAATAGCTCCGCGAGTACGCGCAGTCGAAAACATGGTAGCAAGGTCTAGGGAAAAAACAAATTCGAAACAAGGAGGCC
CTGCTTGCGTCAACTGTCACGTAAAAATGTGGTTGAGCTTTTTTTTTGATGGAACCGGAAACCATCGTGACAATGACTTT
CCAAGAAATCACAGCAATGTGGCAGCCTTGTTCGATGCCCACATCGATGATCGCGGTAACGCAATTGCATCTCTTTACTA
TCAAGGCATCGGAACGCCCTTTGAATTCAAAGATCGTTACGAGCGAACTCCGACGATGACACGCGACGGCAATGTTATCT
GGACTGACACCAATGGCTACAAGGAGGACGAAAGCAGCTGGAATAAGGGATTCGGTGGTGGATTGGAAAATCGGCTAGAG
AAAGCATTATTTGACTTTCAGGCAATAGTTGAACTTCAGCAGTCTAAAACTCGCGTCGATGAGATTAATATCGCCATTTT
CGGCTTCTCACGCGGCTCGACCGAAGCACGTGCGTTCGCAAACTGGCTTTCCAACCACAGTAAAATCAAGATTAGCGGCA
ACACTCTTACTTACGCCGGTATACCACTTAATTTCAAATTTCTAGGAATCTTTGATACTGTTGAGTCGGTCGGCGGAGCC
GGAGTCAATAAACGGCCAAAGCTTGTAAAAATCAGCCTTCCCAGCTATATCCAGAAGTGCTTACATATCGTCGCCGCACA
CGAATTGCGTGCGGCTTTTCCATTGACCCACCTCGGAACCAACCGCTACGCCCAAGCAGTTTATCCCGGCGCACATGCTG
ACGTCGGAGGCGGCTATGCAGACAAGGAGCAAGGACGAAACAACAAACTTGCACGTCTAGGGAAGGTCTGA

Upstream 100 bases:

>100_bases
CGGAAGATCGTCATTGAAACGACGCTAGGCGCAAACATCTCACCACGTAGCGATCTAATTAATGCAAGACTTGCGGAACT
ACGAATCCACAAAGAAGTCA

Downstream 100 bases:

>100_bases
ACAACCCATAAAACCTCTAAAATTCCAGCTTCTTGCATTTCAATGACTGGAAAAATGCTGAGTCGGGTGCGATTTTTGCA
ACGTTCTGGCGGTTTTGGCT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 316; Mature: 316

Protein sequence:

>316_residues
MLIKICFLKEIVTANTWRLMTMNDDVNVIAPRVRAVENMVARSREKTNSKQGGPACVNCHVKMWLSFFFDGTGNHRDNDF
PRNHSNVAALFDAHIDDRGNAIASLYYQGIGTPFEFKDRYERTPTMTRDGNVIWTDTNGYKEDESSWNKGFGGGLENRLE
KALFDFQAIVELQQSKTRVDEINIAIFGFSRGSTEARAFANWLSNHSKIKISGNTLTYAGIPLNFKFLGIFDTVESVGGA
GVNKRPKLVKISLPSYIQKCLHIVAAHELRAAFPLTHLGTNRYAQAVYPGAHADVGGGYADKEQGRNNKLARLGKV

Sequences:

>Translated_316_residues
MLIKICFLKEIVTANTWRLMTMNDDVNVIAPRVRAVENMVARSREKTNSKQGGPACVNCHVKMWLSFFFDGTGNHRDNDF
PRNHSNVAALFDAHIDDRGNAIASLYYQGIGTPFEFKDRYERTPTMTRDGNVIWTDTNGYKEDESSWNKGFGGGLENRLE
KALFDFQAIVELQQSKTRVDEINIAIFGFSRGSTEARAFANWLSNHSKIKISGNTLTYAGIPLNFKFLGIFDTVESVGGA
GVNKRPKLVKISLPSYIQKCLHIVAAHELRAAFPLTHLGTNRYAQAVYPGAHADVGGGYADKEQGRNNKLARLGKV
>Mature_316_residues
MLIKICFLKEIVTANTWRLMTMNDDVNVIAPRVRAVENMVARSREKTNSKQGGPACVNCHVKMWLSFFFDGTGNHRDNDF
PRNHSNVAALFDAHIDDRGNAIASLYYQGIGTPFEFKDRYERTPTMTRDGNVIWTDTNGYKEDESSWNKGFGGGLENRLE
KALFDFQAIVELQQSKTRVDEINIAIFGFSRGSTEARAFANWLSNHSKIKISGNTLTYAGIPLNFKFLGIFDTVESVGGA
GVNKRPKLVKISLPSYIQKCLHIVAAHELRAAFPLTHLGTNRYAQAVYPGAHADVGGGYADKEQGRNNKLARLGKV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35239; Mature: 35239

Theoretical pI: Translated: 9.60; Mature: 9.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLIKICFLKEIVTANTWRLMTMNDDVNVIAPRVRAVENMVARSREKTNSKQGGPACVNCH
CEEEEEEHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEHH
VKMWLSFFFDGTGNHRDNDFPRNHSNVAALFDAHIDDRGNAIASLYYQGIGTPFEFKDRY
HHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHCCCCCCHHHHHH
ERTPTMTRDGNVIWTDTNGYKEDESSWNKGFGGGLENRLEKALFDFQAIVELQQSKTRVD
CCCCCEECCCCEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCE
EINIAIFGFSRGSTEARAFANWLSNHSKIKISGNTLTYAGIPLNFKFLGIFDTVESVGGA
EEEEEEEEECCCCHHHHHHHHHHCCCCEEEEECCEEEEECCCCCEEEEEHHHHHHHHCCC
GVNKRPKLVKISLPSYIQKCLHIVAAHELRAAFPLTHLGTNRYAQAVYPGAHADVGGGYA
CCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHCCHHHCCCCCHHHHCCCCCCCCCCCCCC
DKEQGRNNKLARLGKV
CHHCCCCCHHHHHCCC
>Mature Secondary Structure
MLIKICFLKEIVTANTWRLMTMNDDVNVIAPRVRAVENMVARSREKTNSKQGGPACVNCH
CEEEEEEHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEHH
VKMWLSFFFDGTGNHRDNDFPRNHSNVAALFDAHIDDRGNAIASLYYQGIGTPFEFKDRY
HHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHCCCCCCHHHHHH
ERTPTMTRDGNVIWTDTNGYKEDESSWNKGFGGGLENRLEKALFDFQAIVELQQSKTRVD
CCCCCEECCCCEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCE
EINIAIFGFSRGSTEARAFANWLSNHSKIKISGNTLTYAGIPLNFKFLGIFDTVESVGGA
EEEEEEEEECCCCHHHHHHHHHHCCCCEEEEECCEEEEECCCCCEEEEEHHHHHHHHCCC
GVNKRPKLVKISLPSYIQKCLHIVAAHELRAAFPLTHLGTNRYAQAVYPGAHADVGGGYA
CCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHCCHHHCCCCCHHHHCCCCCCCCCCCCCC
DKEQGRNNKLARLGKV
CHHCCCCCHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA