| Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
|---|---|
| Accession | NC_007705 |
| Length | 4,940,217 |
Click here to switch to the map view.
The map label for this gene is 84622996
Identifier: 84622996
GI number: 84622996
Start: 1461046
End: 1461996
Strand: Direct
Name: 84622996
Synonym: XOO_1339
Alternate gene names: NA
Gene position: 1461046-1461996 (Clockwise)
Preceding gene: 84622995
Following gene: 84622998
Centisome position: 29.57
GC content: 47.21
Gene sequence:
>951_bases ATGCTGATCAAAATATGCTTTCTGAAAGAAATCGTTACAGCGAATACATGGAGGTTAATGACGATGAACGATGATGTCAA TGTAATAGCTCCGCGAGTACGCGCAGTCGAAAACATGGTAGCAAGGTCTAGGGAAAAAACAAATTCGAAACAAGGAGGCC CTGCTTGCGTCAACTGTCACGTAAAAATGTGGTTGAGCTTTTTTTTTGATGGAACCGGAAACCATCGTGACAATGACTTT CCAAGAAATCACAGCAATGTGGCAGCCTTGTTCGATGCCCACATCGATGATCGCGGTAACGCAATTGCATCTCTTTACTA TCAAGGCATCGGAACGCCCTTTGAATTCAAAGATCGTTACGAGCGAACTCCGACGATGACACGCGACGGCAATGTTATCT GGACTGACACCAATGGCTACAAGGAGGACGAAAGCAGCTGGAATAAGGGATTCGGTGGTGGATTGGAAAATCGGCTAGAG AAAGCATTATTTGACTTTCAGGCAATAGTTGAACTTCAGCAGTCTAAAACTCGCGTCGATGAGATTAATATCGCCATTTT CGGCTTCTCACGCGGCTCGACCGAAGCACGTGCGTTCGCAAACTGGCTTTCCAACCACAGTAAAATCAAGATTAGCGGCA ACACTCTTACTTACGCCGGTATACCACTTAATTTCAAATTTCTAGGAATCTTTGATACTGTTGAGTCGGTCGGCGGAGCC GGAGTCAATAAACGGCCAAAGCTTGTAAAAATCAGCCTTCCCAGCTATATCCAGAAGTGCTTACATATCGTCGCCGCACA CGAATTGCGTGCGGCTTTTCCATTGACCCACCTCGGAACCAACCGCTACGCCCAAGCAGTTTATCCCGGCGCACATGCTG ACGTCGGAGGCGGCTATGCAGACAAGGAGCAAGGACGAAACAACAAACTTGCACGTCTAGGGAAGGTCTGA
Upstream 100 bases:
>100_bases CGGAAGATCGTCATTGAAACGACGCTAGGCGCAAACATCTCACCACGTAGCGATCTAATTAATGCAAGACTTGCGGAACT ACGAATCCACAAAGAAGTCA
Downstream 100 bases:
>100_bases ACAACCCATAAAACCTCTAAAATTCCAGCTTCTTGCATTTCAATGACTGGAAAAATGCTGAGTCGGGTGCGATTTTTGCA ACGTTCTGGCGGTTTTGGCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 316; Mature: 316
Protein sequence:
>316_residues MLIKICFLKEIVTANTWRLMTMNDDVNVIAPRVRAVENMVARSREKTNSKQGGPACVNCHVKMWLSFFFDGTGNHRDNDF PRNHSNVAALFDAHIDDRGNAIASLYYQGIGTPFEFKDRYERTPTMTRDGNVIWTDTNGYKEDESSWNKGFGGGLENRLE KALFDFQAIVELQQSKTRVDEINIAIFGFSRGSTEARAFANWLSNHSKIKISGNTLTYAGIPLNFKFLGIFDTVESVGGA GVNKRPKLVKISLPSYIQKCLHIVAAHELRAAFPLTHLGTNRYAQAVYPGAHADVGGGYADKEQGRNNKLARLGKV
Sequences:
>Translated_316_residues MLIKICFLKEIVTANTWRLMTMNDDVNVIAPRVRAVENMVARSREKTNSKQGGPACVNCHVKMWLSFFFDGTGNHRDNDF PRNHSNVAALFDAHIDDRGNAIASLYYQGIGTPFEFKDRYERTPTMTRDGNVIWTDTNGYKEDESSWNKGFGGGLENRLE KALFDFQAIVELQQSKTRVDEINIAIFGFSRGSTEARAFANWLSNHSKIKISGNTLTYAGIPLNFKFLGIFDTVESVGGA GVNKRPKLVKISLPSYIQKCLHIVAAHELRAAFPLTHLGTNRYAQAVYPGAHADVGGGYADKEQGRNNKLARLGKV >Mature_316_residues MLIKICFLKEIVTANTWRLMTMNDDVNVIAPRVRAVENMVARSREKTNSKQGGPACVNCHVKMWLSFFFDGTGNHRDNDF PRNHSNVAALFDAHIDDRGNAIASLYYQGIGTPFEFKDRYERTPTMTRDGNVIWTDTNGYKEDESSWNKGFGGGLENRLE KALFDFQAIVELQQSKTRVDEINIAIFGFSRGSTEARAFANWLSNHSKIKISGNTLTYAGIPLNFKFLGIFDTVESVGGA GVNKRPKLVKISLPSYIQKCLHIVAAHELRAAFPLTHLGTNRYAQAVYPGAHADVGGGYADKEQGRNNKLARLGKV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35239; Mature: 35239
Theoretical pI: Translated: 9.60; Mature: 9.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLIKICFLKEIVTANTWRLMTMNDDVNVIAPRVRAVENMVARSREKTNSKQGGPACVNCH CEEEEEEHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEHH VKMWLSFFFDGTGNHRDNDFPRNHSNVAALFDAHIDDRGNAIASLYYQGIGTPFEFKDRY HHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHCCCCCCHHHHHH ERTPTMTRDGNVIWTDTNGYKEDESSWNKGFGGGLENRLEKALFDFQAIVELQQSKTRVD CCCCCEECCCCEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCE EINIAIFGFSRGSTEARAFANWLSNHSKIKISGNTLTYAGIPLNFKFLGIFDTVESVGGA EEEEEEEEECCCCHHHHHHHHHHCCCCEEEEECCEEEEECCCCCEEEEEHHHHHHHHCCC GVNKRPKLVKISLPSYIQKCLHIVAAHELRAAFPLTHLGTNRYAQAVYPGAHADVGGGYA CCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHCCHHHCCCCCHHHHCCCCCCCCCCCCCC DKEQGRNNKLARLGKV CHHCCCCCHHHHHCCC >Mature Secondary Structure MLIKICFLKEIVTANTWRLMTMNDDVNVIAPRVRAVENMVARSREKTNSKQGGPACVNCH CEEEEEEHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEHH VKMWLSFFFDGTGNHRDNDFPRNHSNVAALFDAHIDDRGNAIASLYYQGIGTPFEFKDRY HHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHCCCCCCHHHHHH ERTPTMTRDGNVIWTDTNGYKEDESSWNKGFGGGLENRLEKALFDFQAIVELQQSKTRVD CCCCCEECCCCEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCE EINIAIFGFSRGSTEARAFANWLSNHSKIKISGNTLTYAGIPLNFKFLGIFDTVESVGGA EEEEEEEEECCCCHHHHHHHHHHCCCCEEEEECCEEEEECCCCCEEEEEHHHHHHHHCCC GVNKRPKLVKISLPSYIQKCLHIVAAHELRAAFPLTHLGTNRYAQAVYPGAHADVGGGYA CCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHCCHHHCCCCCHHHHCCCCCCCCCCCCCC DKEQGRNNKLARLGKV CHHCCCCCHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA