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The map label for this gene is 84622993

Identifier: 84622993

GI number: 84622993

Start: 1456735

End: 1459557

Strand: Direct

Name: 84622993

Synonym: XOO_1336

Alternate gene names: NA

Gene position: 1456735-1459557 (Clockwise)

Preceding gene: 84622992

Following gene: 84622994

Centisome position: 29.49

GC content: 72.58

Gene sequence:

>2823_bases
ATGGAAGCACTGAATGCGTTGATGTTTCAGGGGGCCTTGCTGTCCGACAGCGGCCGCCTATACCGCTTGCAGCTGCCTGG
CGGGGATGTCCAGGTGGTGGAGCGCTGGAGCGGGTCGGAACGGCTGAGCGGCGGTTTTGAGTGGTGGGTGGACGTGCTGA
GCACGCAGGCGGGCTTGCCGCTGGAGGCGTGGCTGGGGCGGCGCGCGACGCTGTACACCCGGCTGGCCGATGGCGATGAA
AGCCCGCGCACGGGGCTGATCCACGACGCGTACGCACTGGGCAGCGACGGCGGGCTGGCGCGCTACCGGGTAGGCCTGGT
GCCGTGGACGTGGTGGTTGTCGCAGGGCCGGCACAGCCGGGTATTCCAGGAACGCACGCTGGTGCAGATCGTGGAAGCGG
TGTTCGCCGACTACGCGCCGATGGCAAGCTGGCAGTGGAGCGAGGAGACGAGCGCGTTCCTGGCCCAGGCGCGGCCGCGC
AGCTACTGCGTGCAGTACCGCGAGAGCGACCTGGATTTCGTGCAGCGGCTGCTGGCCGAGGAAGGCCTGGGCTGGCGGCT
GCAGGAGGCGGACGCGTCGCCCGGCGGGCACCAGCTGGTGGTGTTCGCCGACAGCGTCGCGCAACCGCAGGACCCCAGTT
CGGCGCAGGGCGGCGGGCTGCGCTACCACCGCAGCGACGCCACCGAGGCGGCCGACAGCGTGCTGGCGATCGGCGCCACC
CGGCGGCTGGGCAGCGGCCGGCTGACGGTGCTCAGCGAAGACTTCAAGACGCGTCAGGCGCGCAGCGCGCAGTTGCCGTT
GCACGGCGGCGGCAGGCAGTCGCTGCGCGAGGTGTACGAGCCGGTGGGGATGGACGCCTTCGCCAGCGCGCAGGCAGCAG
ACCGCTCTGCGGAGTTGATGGCGCAGGCGCACGAGGCGCAGTGGTCACCGTGGCAGGGCCGCAGCACGGTGCGCACGCTG
CGCGCCGGCACCTGGTTCACGCTGACCCAGTCACCGCAGCAGGGCCAGGCACCGCCGGCGCAGCTGTTGCTGACGCGGGT
GTGGCATGCGGGTATCAACAACTTGCCGGTGGACGTGCGCGCGGCGGTGCAGTCGCAGTTGGGGGCCGCGCCGGCGTGGC
CGGATGCCAGCGCGGTGGCCGCACGCAGCACCTGGGCGCAGGCCGAGGCGGTGGGCTACGGCAACGCCTTCGAGGCGGTG
GACCGGCAGCAGCCGTGGCGGCCGGTGCTGGCCGACGGCACCGGGGCGCGGCTGCACCCGCGGCCGACCGCGCCGGGCTA
CCAGAGCGCCATCGTGGTCGGTGCCGATGGCAGCACCGACGGCAGCCAGGAGGTCCATGCCGACGCGCTGGGCCGGATCC
GGGTCAGGTTCCACTTCCAGCACGCCGCGTCGGCCCCGGCCGCGCAGGACAGCACGTGGCTGCGGGTGGCGCAGCGCTAC
GCCGGCCCGGGCGTGGGCAGCCAGTTCCTGCCACGCATCGGCCAGGAAGTGCTGGTGGGCTTCCTGGAGGGGGACATCGA
CCGTCCGGTGGTGCTGGGTGCGCTGTACAACGGCAAGGGCGAAGCCGGCGTTCCCGCCACCCCCGGCGGCACCAGCGCCG
AGGCCGACACCGGCCTGTACGCCAAGGCCGGCGACGGTAGACCCAGCGCGCAGGGCAACCTGGCCGGCGGCCATGCCCCG
GCCTGGCACGGCGCCGGCGGCGGCGCGGACAACCACCGCAACGCCACCGCGCTGTGGGGCGTGCAATCCAAGGAATGGGG
CAGCGCTGGCCACAGCCGGCTGGTGTTCGACGACAGCGACCAGCAACTGCGCTTGCAGCTGGCCACGACCCAGGCAGCCA
CGCAACTGAACCTGGGGCACCTGATCCACCAGGCCGACAACTACCGCGGCAGCTTCCGCGGGGAAGGCTTCGAACTGCGC
ACCGACGCGTGGGGCGCGGTGCGTGCCAGCTCGGGGCTATGGCTGAGCAGCTACGGCCGCAGCGGCGGCCCGGCCGGCGA
GGCGACCCAGCCCAGCGCATTGCTGAGCCAGCTGCAGACGCTGGGCAAGACGTTCTCGCAGGCGGCGGGCACGCACCAGA
CGGTGAAGCTGGCCGCGCACGAAGGCGTGGGCCAGGCGAACCACTCCCAGCTGATCGCCGAGCAGGCGCCGCTGCCGGCG
CTGCTGACCAGCGTGAAGACCACGGTGCCGGGCACGGCCTACGCCGACGCCAAGGGCGCGGCGGCCGAGCGCCGCGCCAG
CCCGGGCGACGACCGGGTGCCGCACACCGGCGATGCGCTGCTGGGCCTGGCGGCGCCAGCGGGGATCGGCGTGGTGGCCG
GCCAGGGCCTGAGCTGGAGCGTGGGCGAGACGCTGACGCTGGCCAGCGGCGCGGGCAGCGAAGCGGCCATCGCCGGCGAC
GCCCGGCTGCACAGCGGCCAGGCAATCGGCGTGCTGGCCGCGGCGGTGGACGGCCGGCAAACGCAAGCCAACAGCCTGAG
CCTCGTCAGCGGCGAAGGCGCGCTGGACGTGCAGGCGCAGTCGGACGACGTGCGCGTGCAGTCGAAAGAAGGCCTGAAGC
TGATCAGCGCCAACGCCGACGTGGCCCTGGCGGCGGGCAAGACCCTCCACCTGGCGGTGGCCGGCGGGGCCAGCGTGACC
ATCGAAGGCGGCAACATCACCGTCGCCTGCCCCGGCACCATCACCGTGCATGCGAGCAAGAAGTCGTTCGTGGGGCCAAC
GACGCTGAACCGGTCGTTTGTCGCTTGGCCGCAAAGCAACTTGAATGCGCCTTGCATGATGCAGGCTGCGGCGACCAATA
GCGCGTTTGTGCGAGTGGACTAA

Upstream 100 bases:

>100_bases
CGCCTGCATGCGCGCCGCCGCCTCGTCTGTTAAATTCGCCCTCCAGGGGCAGGAAACGATGTTGCCCGGGGCGCGATGGC
CCGAGGACAGAGGTATTGTG

Downstream 100 bases:

>100_bases
CGGACCATGAAACGCAGCAGCCTAAGCAATCCTGCCTCCTACCAGCATTGGGTCATGTCGCATGTCGGCGAGGAGCAATA
CCTGATCGCCCTGCTCGACC

Product: putative VGR-related protein

Products: NA

Alternate protein names: Type VI Secretion System Vgr Family Protein; VGR-Related Protein; Rhs Element Vgr Family Protein; Vgr-Related Protein; VgrG Protein; Rhs-Family Protein; Rhs Element Vgr Family; VGR-Like Protein; VGR-Related Type VI Secretion System Protein; Vgr Related Protein; Rhs Element Vgr Related Protein; Rhs Element Vgr-Related Protein; Conserved Hypothethical Protein; Rhs Element Vgr ProteinGp5-Like; Type VI Secretion System VgrG Family Protein; Rhs Family Protein; Fimbrial Operon Related Protein; VgrG Family T6SS G; Vgr Family Type VI Secretion System

Number of amino acids: Translated: 940; Mature: 940

Protein sequence:

>940_residues
MEALNALMFQGALLSDSGRLYRLQLPGGDVQVVERWSGSERLSGGFEWWVDVLSTQAGLPLEAWLGRRATLYTRLADGDE
SPRTGLIHDAYALGSDGGLARYRVGLVPWTWWLSQGRHSRVFQERTLVQIVEAVFADYAPMASWQWSEETSAFLAQARPR
SYCVQYRESDLDFVQRLLAEEGLGWRLQEADASPGGHQLVVFADSVAQPQDPSSAQGGGLRYHRSDATEAADSVLAIGAT
RRLGSGRLTVLSEDFKTRQARSAQLPLHGGGRQSLREVYEPVGMDAFASAQAADRSAELMAQAHEAQWSPWQGRSTVRTL
RAGTWFTLTQSPQQGQAPPAQLLLTRVWHAGINNLPVDVRAAVQSQLGAAPAWPDASAVAARSTWAQAEAVGYGNAFEAV
DRQQPWRPVLADGTGARLHPRPTAPGYQSAIVVGADGSTDGSQEVHADALGRIRVRFHFQHAASAPAAQDSTWLRVAQRY
AGPGVGSQFLPRIGQEVLVGFLEGDIDRPVVLGALYNGKGEAGVPATPGGTSAEADTGLYAKAGDGRPSAQGNLAGGHAP
AWHGAGGGADNHRNATALWGVQSKEWGSAGHSRLVFDDSDQQLRLQLATTQAATQLNLGHLIHQADNYRGSFRGEGFELR
TDAWGAVRASSGLWLSSYGRSGGPAGEATQPSALLSQLQTLGKTFSQAAGTHQTVKLAAHEGVGQANHSQLIAEQAPLPA
LLTSVKTTVPGTAYADAKGAAAERRASPGDDRVPHTGDALLGLAAPAGIGVVAGQGLSWSVGETLTLASGAGSEAAIAGD
ARLHSGQAIGVLAAAVDGRQTQANSLSLVSGEGALDVQAQSDDVRVQSKEGLKLISANADVALAAGKTLHLAVAGGASVT
IEGGNITVACPGTITVHASKKSFVGPTTLNRSFVAWPQSNLNAPCMMQAAATNSAFVRVD

Sequences:

>Translated_940_residues
MEALNALMFQGALLSDSGRLYRLQLPGGDVQVVERWSGSERLSGGFEWWVDVLSTQAGLPLEAWLGRRATLYTRLADGDE
SPRTGLIHDAYALGSDGGLARYRVGLVPWTWWLSQGRHSRVFQERTLVQIVEAVFADYAPMASWQWSEETSAFLAQARPR
SYCVQYRESDLDFVQRLLAEEGLGWRLQEADASPGGHQLVVFADSVAQPQDPSSAQGGGLRYHRSDATEAADSVLAIGAT
RRLGSGRLTVLSEDFKTRQARSAQLPLHGGGRQSLREVYEPVGMDAFASAQAADRSAELMAQAHEAQWSPWQGRSTVRTL
RAGTWFTLTQSPQQGQAPPAQLLLTRVWHAGINNLPVDVRAAVQSQLGAAPAWPDASAVAARSTWAQAEAVGYGNAFEAV
DRQQPWRPVLADGTGARLHPRPTAPGYQSAIVVGADGSTDGSQEVHADALGRIRVRFHFQHAASAPAAQDSTWLRVAQRY
AGPGVGSQFLPRIGQEVLVGFLEGDIDRPVVLGALYNGKGEAGVPATPGGTSAEADTGLYAKAGDGRPSAQGNLAGGHAP
AWHGAGGGADNHRNATALWGVQSKEWGSAGHSRLVFDDSDQQLRLQLATTQAATQLNLGHLIHQADNYRGSFRGEGFELR
TDAWGAVRASSGLWLSSYGRSGGPAGEATQPSALLSQLQTLGKTFSQAAGTHQTVKLAAHEGVGQANHSQLIAEQAPLPA
LLTSVKTTVPGTAYADAKGAAAERRASPGDDRVPHTGDALLGLAAPAGIGVVAGQGLSWSVGETLTLASGAGSEAAIAGD
ARLHSGQAIGVLAAAVDGRQTQANSLSLVSGEGALDVQAQSDDVRVQSKEGLKLISANADVALAAGKTLHLAVAGGASVT
IEGGNITVACPGTITVHASKKSFVGPTTLNRSFVAWPQSNLNAPCMMQAAATNSAFVRVD
>Mature_940_residues
MEALNALMFQGALLSDSGRLYRLQLPGGDVQVVERWSGSERLSGGFEWWVDVLSTQAGLPLEAWLGRRATLYTRLADGDE
SPRTGLIHDAYALGSDGGLARYRVGLVPWTWWLSQGRHSRVFQERTLVQIVEAVFADYAPMASWQWSEETSAFLAQARPR
SYCVQYRESDLDFVQRLLAEEGLGWRLQEADASPGGHQLVVFADSVAQPQDPSSAQGGGLRYHRSDATEAADSVLAIGAT
RRLGSGRLTVLSEDFKTRQARSAQLPLHGGGRQSLREVYEPVGMDAFASAQAADRSAELMAQAHEAQWSPWQGRSTVRTL
RAGTWFTLTQSPQQGQAPPAQLLLTRVWHAGINNLPVDVRAAVQSQLGAAPAWPDASAVAARSTWAQAEAVGYGNAFEAV
DRQQPWRPVLADGTGARLHPRPTAPGYQSAIVVGADGSTDGSQEVHADALGRIRVRFHFQHAASAPAAQDSTWLRVAQRY
AGPGVGSQFLPRIGQEVLVGFLEGDIDRPVVLGALYNGKGEAGVPATPGGTSAEADTGLYAKAGDGRPSAQGNLAGGHAP
AWHGAGGGADNHRNATALWGVQSKEWGSAGHSRLVFDDSDQQLRLQLATTQAATQLNLGHLIHQADNYRGSFRGEGFELR
TDAWGAVRASSGLWLSSYGRSGGPAGEATQPSALLSQLQTLGKTFSQAAGTHQTVKLAAHEGVGQANHSQLIAEQAPLPA
LLTSVKTTVPGTAYADAKGAAAERRASPGDDRVPHTGDALLGLAAPAGIGVVAGQGLSWSVGETLTLASGAGSEAAIAGD
ARLHSGQAIGVLAAAVDGRQTQANSLSLVSGEGALDVQAQSDDVRVQSKEGLKLISANADVALAAGKTLHLAVAGGASVT
IEGGNITVACPGTITVHASKKSFVGPTTLNRSFVAWPQSNLNAPCMMQAAATNSAFVRVD

Specific function: Unknown

COG id: COG3501

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 98631; Mature: 98631

Theoretical pI: Translated: 6.59; Mature: 6.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEALNALMFQGALLSDSGRLYRLQLPGGDVQVVERWSGSERLSGGFEWWVDVLSTQAGLP
CCHHHHHHHCCEEECCCCCEEEEECCCCCEEEEEECCCCCCCCCHHHHHHHHHHCCCCCC
LEAWLGRRATLYTRLADGDESPRTGLIHDAYALGSDGGLARYRVGLVPWTWWLSQGRHSR
HHHHHCCCEEEEEEECCCCCCCCCCEEEHHEEECCCCCEEEEEEECCCHHHHHHCCCHHH
VFQERTLVQIVEAVFADYAPMASWQWSEETSAFLAQARPRSYCVQYRESDLDFVQRLLAE
HHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHH
EGLGWRLQEADASPGGHQLVVFADSVAQPQDPSSAQGGGLRYHRSDATEAADSVLAIGAT
CCCCEEEECCCCCCCCCEEEEEECCCCCCCCCCCCCCCCEEEECCCHHHHHHHEEEEECH
RRLGSGRLTVLSEDFKTRQARSAQLPLHGGGRQSLREVYEPVGMDAFASAQAADRSAELM
HCCCCCEEEEEECCHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHCHHHHHH
AQAHEAQWSPWQGRSTVRTLRAGTWFTLTQSPQQGQAPPAQLLLTRVWHAGINNLPVDVR
HHHHHCCCCCCCCCHHHHHHHCCEEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCCHHHH
AAVQSQLGAAPAWPDASAVAARSTWAQAEAVGYGNAFEAVDRQQPWRPVLADGTGARLHP
HHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCEEECCCCCEECC
RPTAPGYQSAIVVGADGSTDGSQEVHADALGRIRVRFHFQHAASAPAAQDSTWLRVAQRY
CCCCCCCCCEEEEECCCCCCCCCHHHHHHHCEEEEEEEEEHHCCCCCCCCHHHHHHHHHH
AGPGVGSQFLPRIGQEVLVGFLEGDIDRPVVLGALYNGKGEAGVPATPGGTSAEADTGLY
CCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCEE
AKAGDGRPSAQGNLAGGHAPAWHGAGGGADNHRNATALWGVQSKEWGSAGHSRLVFDDSD
EECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCEEEEECCC
QQLRLQLATTQAATQLNLGHLIHQADNYRGSFRGEGFELRTDAWGAVRASSGLWLSSYGR
CEEEEEEEEHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCEEECCCCCEEECCCC
SGGPAGEATQPSALLSQLQTLGKTFSQAAGTHQTVKLAAHEGVGQANHSQLIAEQAPLPA
CCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCHHHHHHHCCCHHH
LLTSVKTTVPGTAYADAKGAAAERRASPGDDRVPHTGDALLGLAAPAGIGVVAGQGLSWS
HHHHHHHCCCCCEECCCCCCHHHHCCCCCCCCCCCCCCHHHHHCCCCCCEEEECCCCCCC
VGETLTLASGAGSEAAIAGDARLHSGQAIGVLAAAVDGRQTQANSLSLVSGEGALDVQAQ
CCCEEEEECCCCCCEEEECCCEECCCCEEEEEEEECCCCCCCCCCEEEEECCCCEEEEEC
SDDVRVQSKEGLKLISANADVALAAGKTLHLAVAGGASVTIEGGNITVACPGTITVHASK
CCCEEEECCCCEEEEECCCCEEEECCCEEEEEEECCCEEEEECCEEEEECCCEEEEEECC
KSFVGPTTLNRSFVAWPQSNLNAPCMMQAAATNSAFVRVD
CCCCCCCCCCCCEEECCCCCCCCCEEEEEECCCCEEEEEC
>Mature Secondary Structure
MEALNALMFQGALLSDSGRLYRLQLPGGDVQVVERWSGSERLSGGFEWWVDVLSTQAGLP
CCHHHHHHHCCEEECCCCCEEEEECCCCCEEEEEECCCCCCCCCHHHHHHHHHHCCCCCC
LEAWLGRRATLYTRLADGDESPRTGLIHDAYALGSDGGLARYRVGLVPWTWWLSQGRHSR
HHHHHCCCEEEEEEECCCCCCCCCCEEEHHEEECCCCCEEEEEEECCCHHHHHHCCCHHH
VFQERTLVQIVEAVFADYAPMASWQWSEETSAFLAQARPRSYCVQYRESDLDFVQRLLAE
HHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHH
EGLGWRLQEADASPGGHQLVVFADSVAQPQDPSSAQGGGLRYHRSDATEAADSVLAIGAT
CCCCEEEECCCCCCCCCEEEEEECCCCCCCCCCCCCCCCEEEECCCHHHHHHHEEEEECH
RRLGSGRLTVLSEDFKTRQARSAQLPLHGGGRQSLREVYEPVGMDAFASAQAADRSAELM
HCCCCCEEEEEECCHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHCHHHHHH
AQAHEAQWSPWQGRSTVRTLRAGTWFTLTQSPQQGQAPPAQLLLTRVWHAGINNLPVDVR
HHHHHCCCCCCCCCHHHHHHHCCEEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCCHHHH
AAVQSQLGAAPAWPDASAVAARSTWAQAEAVGYGNAFEAVDRQQPWRPVLADGTGARLHP
HHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCEEECCCCCEECC
RPTAPGYQSAIVVGADGSTDGSQEVHADALGRIRVRFHFQHAASAPAAQDSTWLRVAQRY
CCCCCCCCCEEEEECCCCCCCCCHHHHHHHCEEEEEEEEEHHCCCCCCCCHHHHHHHHHH
AGPGVGSQFLPRIGQEVLVGFLEGDIDRPVVLGALYNGKGEAGVPATPGGTSAEADTGLY
CCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCEE
AKAGDGRPSAQGNLAGGHAPAWHGAGGGADNHRNATALWGVQSKEWGSAGHSRLVFDDSD
EECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCEEEEECCC
QQLRLQLATTQAATQLNLGHLIHQADNYRGSFRGEGFELRTDAWGAVRASSGLWLSSYGR
CEEEEEEEEHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCEEECCCCCEEECCCC
SGGPAGEATQPSALLSQLQTLGKTFSQAAGTHQTVKLAAHEGVGQANHSQLIAEQAPLPA
CCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCHHHHHHHCCCHHH
LLTSVKTTVPGTAYADAKGAAAERRASPGDDRVPHTGDALLGLAAPAGIGVVAGQGLSWS
HHHHHHHCCCCCEECCCCCCHHHHCCCCCCCCCCCCCCHHHHHCCCCCCEEEECCCCCCC
VGETLTLASGAGSEAAIAGDARLHSGQAIGVLAAAVDGRQTQANSLSLVSGEGALDVQAQ
CCCEEEEECCCCCCEEEECCCEECCCCEEEEEEEECCCCCCCCCCEEEEECCCCEEEEEC
SDDVRVQSKEGLKLISANADVALAAGKTLHLAVAGGASVTIEGGNITVACPGTITVHASK
CCCEEEECCCCEEEEECCCCEEEECCCEEEEEEECCCEEEEECCEEEEECCCEEEEEECC
KSFVGPTTLNRSFVAWPQSNLNAPCMMQAAATNSAFVRVD
CCCCCCCCCCCCEEECCCCCCCCCEEEEEECCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA