Click here to switch to the map view.

The map label for this gene is yhhW [C]

Identifier: 84622991

GI number: 84622991

Start: 1455262

End: 1456119

Strand: Direct

Name: yhhW [C]

Synonym: XOO_1334

Alternate gene names: 84622991

Gene position: 1455262-1456119 (Clockwise)

Preceding gene: 84622988

Following gene: 84622992

Centisome position: 29.46

GC content: 64.57

Gene sequence:

>858_bases
ATGAGCACCACGACCACCACGGCCGCGCACGTGTTGCGCACGATCCGCGGCATGCCGACTTCCGACGGGGCCGGCGTGAA
GCTGACCCGCGTCATCGGGACGCAGCAGCTACCGGAGCTGCACCCGTTTCTGATGCTCGATGAGTTCGGTACCGAGAAGG
CCGAAGACTATCTGGCCGGGTTCCCCAGCCACCCGCACCGCGGCTTCGAGACGGTGACCTACATGCTCGACGGGCGCATG
CGCCATAAGGACAACCACGGCAACGAAGGCCTGCTGACCCCGGGCAGCGTGCAGTGGATGACTGCCGGCCGCGGCCTGAT
CCATTCGGAAATGCCGGAGCAGGAATCCGGACGCATGCGCGGCTTTCAGCTGTGGGTAAACCTGCCGGCACGCGACAAGA
TGACCGATCCCAAGTATCAGGAGTACGCACCGGACCATATTCCAGTGGCGCATCCGGCGCCCGGCGTAACCGTGAAGGTG
ATTGCCGGTGCGGTCGGCGAGGTGGTGGGGCCGATCGTGCAACCTGCAACGCGCCCGGTCTATCTGGACATCATGTTGGA
ACCGAACGTGAAGTGGGATGACCTGCTGCCCAACGGGCACAACGCGTTTGCGTATGCCTTCGAAGGCGCGCTGACGGTGG
GCGAGGGCGATGCAGCACGCGCGTTGCTGGCGCAGCAACTGGCGGTGCTGGGTGGTGGCGAGCGCTTGCGTCTGCGTGCC
GGTGCCGATGGCGCGCAATTGATTCTGGTCGCGGGTCGCCCGCTCAACGAACCGGTCATGCGGCATGGCCCGTTCGTGAT
GAACACCAAGCAGGAACTGATGCAGGCGTTCGTCGATTTCCAGGAAGGCCGGTTTTGA

Upstream 100 bases:

>100_bases
GCCGGCGTCGTTTGGAACGATCGGTTGCAGTGGTCGCGGTTGGGCGCCGGGCCGCCCGCACCCATCATTGTTGCTTCGCC
ACAGAGCACAGGGACAAGCG

Downstream 100 bases:

>100_bases
ACCGGCCCGCTTGCACGACGGCGGGAGCGCGCAATGAGTGACCGGCCTGTTCGCGTCAGTACCGGCACGGGCCGTACACG
GTCAGCATCCACGATGGGCA

Product: pirin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 285; Mature: 284

Protein sequence:

>285_residues
MSTTTTTAAHVLRTIRGMPTSDGAGVKLTRVIGTQQLPELHPFLMLDEFGTEKAEDYLAGFPSHPHRGFETVTYMLDGRM
RHKDNHGNEGLLTPGSVQWMTAGRGLIHSEMPEQESGRMRGFQLWVNLPARDKMTDPKYQEYAPDHIPVAHPAPGVTVKV
IAGAVGEVVGPIVQPATRPVYLDIMLEPNVKWDDLLPNGHNAFAYAFEGALTVGEGDAARALLAQQLAVLGGGERLRLRA
GADGAQLILVAGRPLNEPVMRHGPFVMNTKQELMQAFVDFQEGRF

Sequences:

>Translated_285_residues
MSTTTTTAAHVLRTIRGMPTSDGAGVKLTRVIGTQQLPELHPFLMLDEFGTEKAEDYLAGFPSHPHRGFETVTYMLDGRM
RHKDNHGNEGLLTPGSVQWMTAGRGLIHSEMPEQESGRMRGFQLWVNLPARDKMTDPKYQEYAPDHIPVAHPAPGVTVKV
IAGAVGEVVGPIVQPATRPVYLDIMLEPNVKWDDLLPNGHNAFAYAFEGALTVGEGDAARALLAQQLAVLGGGERLRLRA
GADGAQLILVAGRPLNEPVMRHGPFVMNTKQELMQAFVDFQEGRF
>Mature_284_residues
STTTTTAAHVLRTIRGMPTSDGAGVKLTRVIGTQQLPELHPFLMLDEFGTEKAEDYLAGFPSHPHRGFETVTYMLDGRMR
HKDNHGNEGLLTPGSVQWMTAGRGLIHSEMPEQESGRMRGFQLWVNLPARDKMTDPKYQEYAPDHIPVAHPAPGVTVKVI
AGAVGEVVGPIVQPATRPVYLDIMLEPNVKWDDLLPNGHNAFAYAFEGALTVGEGDAARALLAQQLAVLGGGERLRLRAG
ADGAQLILVAGRPLNEPVMRHGPFVMNTKQELMQAFVDFQEGRF

Specific function: Unknown

COG id: COG1741

COG function: function code R; Pirin-related protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the pirin family [H]

Homologues:

Organism=Homo sapiens, GI66363697, Length=281, Percent_Identity=41.2811387900356, Blast_Score=211, Evalue=6e-55,
Organism=Homo sapiens, GI4505823, Length=281, Percent_Identity=41.2811387900356, Blast_Score=211, Evalue=6e-55,
Organism=Escherichia coli, GI1789847, Length=82, Percent_Identity=36.5853658536585, Blast_Score=65, Evalue=5e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011051
- InterPro:   IPR012093
- InterPro:   IPR008778
- InterPro:   IPR003829
- InterPro:   IPR014710 [H]

Pfam domain/function: PF02678 Pirin; PF05726 Pirin_C [H]

EC number: NA

Molecular weight: Translated: 31165; Mature: 31034

Theoretical pI: Translated: 6.44; Mature: 6.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTTTTTAAHVLRTIRGMPTSDGAGVKLTRVIGTQQLPELHPFLMLDEFGTEKAEDYLAG
CCCCHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCCEEEEECCCCHHHHHHHHC
FPSHPHRGFETVTYMLDGRMRHKDNHGNEGLLTPGSVQWMTAGRGLIHSEMPEQESGRMR
CCCCCCCCHHHEEHEECCCCCCCCCCCCCCCCCCCCEEEEECCCCCHHCCCCCHHCCCCE
GFQLWVNLPARDKMTDPKYQEYAPDHIPVAHPAPGVTVKVIAGAVGEVVGPIVQPATRPV
EEEEEEECCCCCCCCCCCHHHCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHCCCCCCE
YLDIMLEPNVKWDDLLPNGHNAFAYAFEGALTVGEGDAARALLAQQLAVLGGGERLRLRA
EEEEEECCCCCHHHCCCCCCCEEEEEEECEEEECCCHHHHHHHHHHHHHHCCCCEEEEEE
GADGAQLILVAGRPLNEPVMRHGPFVMNTKQELMQAFVDFQEGRF
CCCCEEEEEECCCCCCCHHHHCCCEEECCHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
STTTTTAAHVLRTIRGMPTSDGAGVKLTRVIGTQQLPELHPFLMLDEFGTEKAEDYLAG
CCCHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCCEEEEECCCCHHHHHHHHC
FPSHPHRGFETVTYMLDGRMRHKDNHGNEGLLTPGSVQWMTAGRGLIHSEMPEQESGRMR
CCCCCCCCHHHEEHEECCCCCCCCCCCCCCCCCCCCEEEEECCCCCHHCCCCCHHCCCCE
GFQLWVNLPARDKMTDPKYQEYAPDHIPVAHPAPGVTVKVIAGAVGEVVGPIVQPATRPV
EEEEEEECCCCCCCCCCCHHHCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHCCCCCCE
YLDIMLEPNVKWDDLLPNGHNAFAYAFEGALTVGEGDAARALLAQQLAVLGGGERLRLRA
EEEEEECCCCCHHHCCCCCCCEEEEEEECEEEECCCHHHHHHHHHHHHHHCCCCEEEEEE
GADGAQLILVAGRPLNEPVMRHGPFVMNTKQELMQAFVDFQEGRF
CCCCEEEEEECCCCCCCHHHHCCCEEECCHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11259647 [H]