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The map label for this gene is ssb [H]

Identifier: 84622980

GI number: 84622980

Start: 1444544

End: 1445080

Strand: Direct

Name: ssb [H]

Synonym: XOO_1323

Alternate gene names: 84622980

Gene position: 1444544-1445080 (Clockwise)

Preceding gene: 84622978

Following gene: 84622982

Centisome position: 29.24

GC content: 65.74

Gene sequence:

>537_bases
ATGGCCCGCGGCATCAATAAAGTCATCCTCGTCGGCAACCTCGGCAACGATCCCGACACCAAGTACACCCAGGCCGGCAT
GGCGATCACGCGCGTGAGCCTGGCCACCACCAGCATGCGCAAGGACCGAGACGGCAATAACCAGGAACGCACCGAGTGGC
ACCGCGTGGTGTTTTTCGGAAAGCTGGGCGAAATCGCCGGCGAGTACCTGCGCAAGGGCTCGCAGGTCTATGTCGAAGGC
GAGCTGCGCTACGACAAATACACCGGTCAGGACGGCGTGGAAAAGTACAGCACCGACATCGTCGCCAATGAGATGCTGAT
GCTCGGCGGCCGTGGGGAAGGCGGTGGTGGCGGCATGGGCGGCGAGCGCCCGCAGCGCTCGCAAGCCCCGCGCCAGCAGC
AGGGCGGTGGTGGCGGGCAGGGCGGTGGTGGATACGGTGGCGGTGGTCAGGACTATGCGCCGCGGCGTCAGCAGCCGGCC
CAGCAGCAGTCGGTACCGCCGATGGACGATTTCGCCGACGACGATATCCCGTTCTGA

Upstream 100 bases:

>100_bases
CAAACTGCCCGGACCGTCGACGGGCAGGTGCGGTAACATTGCCGTACAGACATTCCTCGTTGCGCGCCCCCGGCGCCAGC
GCATCATCTCGGAAGCACCT

Downstream 100 bases:

>100_bases
GGATTGCTTCGTCGCTGCCTCACCCAAGGAAGGCCCGCATTGCGCGGGCCTTCCGCGTTATGGGCAATAGCGCGCCCATG
TCGTCCGATTTTCGCCAGGG

Product: single-stranded DNA-binding protein

Products: NA

Alternate protein names: SSB; Helix-destabilizing protein [H]

Number of amino acids: Translated: 178; Mature: 177

Protein sequence:

>178_residues
MARGINKVILVGNLGNDPDTKYTQAGMAITRVSLATTSMRKDRDGNNQERTEWHRVVFFGKLGEIAGEYLRKGSQVYVEG
ELRYDKYTGQDGVEKYSTDIVANEMLMLGGRGEGGGGGMGGERPQRSQAPRQQQGGGGGQGGGGYGGGGQDYAPRRQQPA
QQQSVPPMDDFADDDIPF

Sequences:

>Translated_178_residues
MARGINKVILVGNLGNDPDTKYTQAGMAITRVSLATTSMRKDRDGNNQERTEWHRVVFFGKLGEIAGEYLRKGSQVYVEG
ELRYDKYTGQDGVEKYSTDIVANEMLMLGGRGEGGGGGMGGERPQRSQAPRQQQGGGGGQGGGGYGGGGQDYAPRRQQPA
QQQSVPPMDDFADDDIPF
>Mature_177_residues
ARGINKVILVGNLGNDPDTKYTQAGMAITRVSLATTSMRKDRDGNNQERTEWHRVVFFGKLGEIAGEYLRKGSQVYVEGE
LRYDKYTGQDGVEKYSTDIVANEMLMLGGRGEGGGGGMGGERPQRSQAPRQQQGGGGGQGGGGYGGGGQDYAPRRQQPAQ
QQSVPPMDDFADDDIPF

Specific function: This protein is essential for replication of the chromosome. It is also involved in DNA recombination and repair [H]

COG id: COG0629

COG function: function code L; Single-stranded DNA-binding protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 SSB domain [H]

Homologues:

Organism=Homo sapiens, GI4507231, Length=116, Percent_Identity=32.7586206896552, Blast_Score=72, Evalue=2e-13,
Organism=Escherichia coli, GI1790494, Length=181, Percent_Identity=48.6187845303867, Blast_Score=147, Evalue=4e-37,
Organism=Drosophila melanogaster, GI85725234, Length=109, Percent_Identity=35.7798165137615, Blast_Score=71, Evalue=4e-13,
Organism=Drosophila melanogaster, GI24647376, Length=109, Percent_Identity=35.7798165137615, Blast_Score=71, Evalue=4e-13,

Paralogues:

None

Copy number: 1622 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 2,000 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR000424
- InterPro:   IPR011344 [H]

Pfam domain/function: PF00436 SSB [H]

EC number: NA

Molecular weight: Translated: 19151; Mature: 19020

Theoretical pI: Translated: 5.32; Mature: 5.32

Prosite motif: PS50935 SSB

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARGINKVILVGNLGNDPDTKYTQAGMAITRVSLATTSMRKDRDGNNQERTEWHRVVFFG
CCCCCCEEEEECCCCCCCCCHHHHHCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHEEEEH
KLGEIAGEYLRKGSQVYVEGELRYDKYTGQDGVEKYSTDIVANEMLMLGGRGEGGGGGMG
HHHHHHHHHHHCCCEEEEEEEEEECCCCCCHHHHHHHHHHHHCCEEEECCCCCCCCCCCC
GERPQRSQAPRQQQGGGGGQGGGGYGGGGQDYAPRRQQPAQQQSVPPMDDFADDDIPF
CCCCCHHCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCC
>Mature Secondary Structure 
ARGINKVILVGNLGNDPDTKYTQAGMAITRVSLATTSMRKDRDGNNQERTEWHRVVFFG
CCCCCEEEEECCCCCCCCCHHHHHCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHEEEEH
KLGEIAGEYLRKGSQVYVEGELRYDKYTGQDGVEKYSTDIVANEMLMLGGRGEGGGGGMG
HHHHHHHHHHHCCCEEEEEEEEEECCCCCCHHHHHHHHHHHHCCEEEECCCCCCCCCCCC
GERPQRSQAPRQQQGGGGGQGGGGYGGGGQDYAPRRQQPAQQQSVPPMDDFADDDIPF
CCCCCHHCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12024217 [H]