| Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
|---|---|
| Accession | NC_007705 |
| Length | 4,940,217 |
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The map label for this gene is 84622813
Identifier: 84622813
GI number: 84622813
Start: 1259862
End: 1261868
Strand: Direct
Name: 84622813
Synonym: XOO_1156
Alternate gene names: NA
Gene position: 1259862-1261868 (Clockwise)
Preceding gene: 84622812
Following gene: 84622814
Centisome position: 25.5
GC content: 64.28
Gene sequence:
>2007_bases ATGACCCCCACCGTGCGCCGATCGCTCACCGTTGCATTGTCGCTGGCCTGCGTCACCGCGCCGATGCTTGCCGCCGCCAC GCCAGCGAGCGCGGCATCCGCAACGCCCGCTGCAGCGAGCGTGTTCGACCCGCTGGCCCTGTTCGCGCCTCTGCAATTGC CCGACGCCCCGAATGCCTACCGCAGCGGTAGCGGCGTGCCCGGCCCGGCGTTCTGGCAGAACCGCGCCGATTACGATCTC CGCGCCAGCATCGACACTGCAACGCACACGCTCAGCGGCGAGGCGGCCATCACCTACACCAACCACAGCCCCGACGCGCT GGACGTGCTGTGGCTGCAACTGGACCAGAACATCTACCGCGCCGATGCCCGCGCTGCTTCCAGCCGCCCACTTAGGCGCA AACAGTTCACCGATGGCATGCAGATCGCCAGTGTCGAGATCGATCAAGGCGGTCGCCGCCAGCCAGCGCATGTCGTTGTC GACGACACGCGTATGCGGGTGGATCTGCCGCAGCCGTTGCCCGGGCAGGGCAAGGCACTCACCGTGCATATCCGTTACCG CTACACGATTCCCGGCACCTGGGGCGGGCGCACTGCGGTCAGTGCCAGCAAGCAAGGCGAGATCTACGAGATTGCGCAGT GGTATCCGCGCATGGCGGTGTACGACGATCTGCGTGGCTGGGACACGCAACCGTATCTGGGCTCGGAGTTTTATCTTGAG TATGGCAACTTCGACTATGCGGTGACCGTGCCGGAGGGCTTTCTGGTCGCCGGCTCGGGCGCATTGACCAACCCGCAGGA CGTGCTCAGCCGTACCGAGCAGCAACGCCTGGAGCAGGCGCGCAGCAGCGACCGCACGGTGCTGATCCGCACGCCTGACG AAGTGACTGCACGTGCGGCCAAGCCGGCAGGCAAGGGGATGCGGACCTGGCGCTTCCACATGGACCACACCCGCGATGTC GCATTCGCCGCATCGCCGGCATTCGTCTGGGACGCGGCACGCATCAACTTGCCGGGCGGCAAGCAGTCGCTGGCGATGTC GGTCTACCCGGTGGAAGGCGTGGGCGCAGACAAGTGGAACCGCTCCACCGAATACGTCAAAGGCGCGATCGAACATTTTT CGCAGTGGTACCCGTACCCGTGGCCGGCAGCGGTCAACCTGGGCGGTTATGGTGCCGGCATGGAATACCCGGGCATCGTC TTCGACGGTTTCGAAGACGGCGGCAAGGGTTTGTTCTGGATCACTGCGCACGAAATCGGCCACACCTGGTTCCCGATGAT CGTCGGCTCCAACGAGCGCCGGCATGCGTTCATGGATGAAGGCTTCAACACCTTCATCGACGTGTATGCATCGGATGCGT TCAACAAGGGCGAATACGCGCCCAAGCGCGATTCGGAATACGCGCCGAAAGGCGGCAACCCGGTCGATGAAATCCTGCCG CTGCTGGCCGATACCCATGCGCCCACGCTGATGGACAACGCCGATTCCACCAGCGAGACCTATCGCCATCCGCTGACTTA CTTCAAGGGCGCCCTGGGGCTGGTGCTGTTGCGCGAACAGATTCTGGGGCCGGCGCGCTTCGATCCTGCGTTTCGCAAAT ACATCGCCACCTGGGCTTACAAGCATCCCACGCCGTCGGATTTCTTCCGGCTGATGGAAAGCGAAAGTGGCGAAGATCTG TCCTGGTGGTGGCGCGGCTGGTATCTCAACAATTGGCAGCTGGACATGGGCATCACCGCAGCGCATTACGTCGACCATGA CCCGTCCAAGGGCGTGCAGGTCACGCTGCGCAGCCGGCAGAAGTTGGTGATGCCGGTGACCTTGCGTGCGGACCTGGCCG ATGGCAGCCATCTGGACCGACGCGTGCCGGTGGAAACCTGGCTGCAGACCACCACCCCCACGGTCAACCTGCCGACCACG CAGAAAGTGCTGCACGTGACGCTGGATCCTGACCATGTGCTGCCGGATGCCGACCGCAGCGATGCGCGTGTGGACGTGAC CGGCTGA
Upstream 100 bases:
>100_bases ACATCCGACGCATCACGCGGACGCAACGGGATCAATGGCATTCCCGCGCGCGGCAAGGCGCGCTGTAGGATGGGAATCCC CTCACGCCGCAGGATTTCGC
Downstream 100 bases:
>100_bases GCATTGCGCAAGGCAGCACGCTGACGTGGCCGCAGGCGCGGTCGCGTCAGCGGCCACCTGCAGTGGCGACGAGCAGTGGA ATGAAAAGGCCTGTGTTTAC
Product: peptidase
Products: NA
Alternate protein names: Aminopeptidase; Peptidase M1 Membrane Alanine Aminopeptidase; Peptidase; Aminopeptidase N-Like Protein; Aminopeptidase N; Secreted Aminopeptidase; M1 Family Aminopeptidase; Membrane Alanine Aminopeptidase; Aminopeptidase M1 Family; Aminopeptidase Protein
Number of amino acids: Translated: 668; Mature: 667
Protein sequence:
>668_residues MTPTVRRSLTVALSLACVTAPMLAAATPASAASATPAAASVFDPLALFAPLQLPDAPNAYRSGSGVPGPAFWQNRADYDL RASIDTATHTLSGEAAITYTNHSPDALDVLWLQLDQNIYRADARAASSRPLRRKQFTDGMQIASVEIDQGGRRQPAHVVV DDTRMRVDLPQPLPGQGKALTVHIRYRYTIPGTWGGRTAVSASKQGEIYEIAQWYPRMAVYDDLRGWDTQPYLGSEFYLE YGNFDYAVTVPEGFLVAGSGALTNPQDVLSRTEQQRLEQARSSDRTVLIRTPDEVTARAAKPAGKGMRTWRFHMDHTRDV AFAASPAFVWDAARINLPGGKQSLAMSVYPVEGVGADKWNRSTEYVKGAIEHFSQWYPYPWPAAVNLGGYGAGMEYPGIV FDGFEDGGKGLFWITAHEIGHTWFPMIVGSNERRHAFMDEGFNTFIDVYASDAFNKGEYAPKRDSEYAPKGGNPVDEILP LLADTHAPTLMDNADSTSETYRHPLTYFKGALGLVLLREQILGPARFDPAFRKYIATWAYKHPTPSDFFRLMESESGEDL SWWWRGWYLNNWQLDMGITAAHYVDHDPSKGVQVTLRSRQKLVMPVTLRADLADGSHLDRRVPVETWLQTTTPTVNLPTT QKVLHVTLDPDHVLPDADRSDARVDVTG
Sequences:
>Translated_668_residues MTPTVRRSLTVALSLACVTAPMLAAATPASAASATPAAASVFDPLALFAPLQLPDAPNAYRSGSGVPGPAFWQNRADYDL RASIDTATHTLSGEAAITYTNHSPDALDVLWLQLDQNIYRADARAASSRPLRRKQFTDGMQIASVEIDQGGRRQPAHVVV DDTRMRVDLPQPLPGQGKALTVHIRYRYTIPGTWGGRTAVSASKQGEIYEIAQWYPRMAVYDDLRGWDTQPYLGSEFYLE YGNFDYAVTVPEGFLVAGSGALTNPQDVLSRTEQQRLEQARSSDRTVLIRTPDEVTARAAKPAGKGMRTWRFHMDHTRDV AFAASPAFVWDAARINLPGGKQSLAMSVYPVEGVGADKWNRSTEYVKGAIEHFSQWYPYPWPAAVNLGGYGAGMEYPGIV FDGFEDGGKGLFWITAHEIGHTWFPMIVGSNERRHAFMDEGFNTFIDVYASDAFNKGEYAPKRDSEYAPKGGNPVDEILP LLADTHAPTLMDNADSTSETYRHPLTYFKGALGLVLLREQILGPARFDPAFRKYIATWAYKHPTPSDFFRLMESESGEDL SWWWRGWYLNNWQLDMGITAAHYVDHDPSKGVQVTLRSRQKLVMPVTLRADLADGSHLDRRVPVETWLQTTTPTVNLPTT QKVLHVTLDPDHVLPDADRSDARVDVTG >Mature_667_residues TPTVRRSLTVALSLACVTAPMLAAATPASAASATPAAASVFDPLALFAPLQLPDAPNAYRSGSGVPGPAFWQNRADYDLR ASIDTATHTLSGEAAITYTNHSPDALDVLWLQLDQNIYRADARAASSRPLRRKQFTDGMQIASVEIDQGGRRQPAHVVVD DTRMRVDLPQPLPGQGKALTVHIRYRYTIPGTWGGRTAVSASKQGEIYEIAQWYPRMAVYDDLRGWDTQPYLGSEFYLEY GNFDYAVTVPEGFLVAGSGALTNPQDVLSRTEQQRLEQARSSDRTVLIRTPDEVTARAAKPAGKGMRTWRFHMDHTRDVA FAASPAFVWDAARINLPGGKQSLAMSVYPVEGVGADKWNRSTEYVKGAIEHFSQWYPYPWPAAVNLGGYGAGMEYPGIVF DGFEDGGKGLFWITAHEIGHTWFPMIVGSNERRHAFMDEGFNTFIDVYASDAFNKGEYAPKRDSEYAPKGGNPVDEILPL LADTHAPTLMDNADSTSETYRHPLTYFKGALGLVLLREQILGPARFDPAFRKYIATWAYKHPTPSDFFRLMESESGEDLS WWWRGWYLNNWQLDMGITAAHYVDHDPSKGVQVTLRSRQKLVMPVTLRADLADGSHLDRRVPVETWLQTTTPTVNLPTTQ KVLHVTLDPDHVLPDADRSDARVDVTG
Specific function: Unknown
COG id: COG0308
COG function: function code E; Aminopeptidase N
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 74129; Mature: 73998
Theoretical pI: Translated: 6.14; Mature: 6.14
Prosite motif: PS00142 ZINC_PROTEASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.1 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.1 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPTVRRSLTVALSLACVTAPMLAAATPASAASATPAAASVFDPLALFAPLQLPDAPNAY CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCC RSGSGVPGPAFWQNRADYDLRASIDTATHTLSGEAAITYTNHSPDALDVLWLQLDQNIYR CCCCCCCCCHHHCCCCCCEEEEECCHHHEEECCCEEEEECCCCCCHHEEEEEECCCHHHH ADARAASSRPLRRKQFTDGMQIASVEIDQGGRRQPAHVVVDDTRMRVDLPQPLPGQGKAL HHHHHCCCCCCHHHHCCCCCEEEEEEECCCCCCCCCEEEEECCEEEEECCCCCCCCCCEE TVHIRYRYTIPGTWGGRTAVSASKQGEIYEIAQWYPRMAVYDDLRGWDTQPYLGSEFYLE EEEEEEEEEECCCCCCCCEECCCCCCCEEEHHHHCCCHHHHHHCCCCCCCCCCCCEEEEE YGNFDYAVTVPEGFLVAGSGALTNPQDVLSRTEQQRLEQARSSDRTVLIRTPDEVTARAA ECCEEEEEECCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHC KPAGKGMRTWRFHMDHTRDVAFAASPAFVWDAARINLPGGKQSLAMSVYPVEGVGADKWN CCCCCCCEEEEEECCCCCCEEEECCCCEEEEEEEEECCCCCCEEEEEEEECCCCCCCCCC RSTEYVKGAIEHFSQWYPYPWPAAVNLGGYGAGMEYPGIVFDGFEDGGKGLFWITAHEIG CHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCCCCCCEEEECCCCCCCEEEEEEEHHCC HTWFPMIVGSNERRHAFMDEGFNTFIDVYASDAFNKGEYAPKRDSEYAPKGGNPVDEILP CEEEEEEECCCCCCHHHHHCCCCCEEEEHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHH LLADTHAPTLMDNADSTSETYRHPLTYFKGALGLVLLREQILGPARFDPAFRKYIATWAY HHHCCCCCCEECCCCCCHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHC KHPTPSDFFRLMESESGEDLSWWWRGWYLNNWQLDMGITAAHYVDHDPSKGVQVTLRSRQ CCCCHHHHHHHHHCCCCCCCEEEEEEEEECCEEEECCCEEEEECCCCCCCCEEEEEECCC KLVMPVTLRADLADGSHLDRRVPVETWLQTTTPTVNLPTTQKVLHVTLDPDHVLPDADRS EEEEEEEEEEECCCCCCCCCCCCHHHHHCCCCCEEECCCCCEEEEEEECCCCCCCCCCCC DARVDVTG CCEEEECC >Mature Secondary Structure TPTVRRSLTVALSLACVTAPMLAAATPASAASATPAAASVFDPLALFAPLQLPDAPNAY CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCC RSGSGVPGPAFWQNRADYDLRASIDTATHTLSGEAAITYTNHSPDALDVLWLQLDQNIYR CCCCCCCCCHHHCCCCCCEEEEECCHHHEEECCCEEEEECCCCCCHHEEEEEECCCHHHH ADARAASSRPLRRKQFTDGMQIASVEIDQGGRRQPAHVVVDDTRMRVDLPQPLPGQGKAL HHHHHCCCCCCHHHHCCCCCEEEEEEECCCCCCCCCEEEEECCEEEEECCCCCCCCCCEE TVHIRYRYTIPGTWGGRTAVSASKQGEIYEIAQWYPRMAVYDDLRGWDTQPYLGSEFYLE EEEEEEEEEECCCCCCCCEECCCCCCCEEEHHHHCCCHHHHHHCCCCCCCCCCCCEEEEE YGNFDYAVTVPEGFLVAGSGALTNPQDVLSRTEQQRLEQARSSDRTVLIRTPDEVTARAA ECCEEEEEECCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHC KPAGKGMRTWRFHMDHTRDVAFAASPAFVWDAARINLPGGKQSLAMSVYPVEGVGADKWN CCCCCCCEEEEEECCCCCCEEEECCCCEEEEEEEEECCCCCCEEEEEEEECCCCCCCCCC RSTEYVKGAIEHFSQWYPYPWPAAVNLGGYGAGMEYPGIVFDGFEDGGKGLFWITAHEIG CHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCCCCCCEEEECCCCCCCEEEEEEEHHCC HTWFPMIVGSNERRHAFMDEGFNTFIDVYASDAFNKGEYAPKRDSEYAPKGGNPVDEILP CEEEEEEECCCCCCHHHHHCCCCCEEEEHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHH LLADTHAPTLMDNADSTSETYRHPLTYFKGALGLVLLREQILGPARFDPAFRKYIATWAY HHHCCCCCCEECCCCCCHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHC KHPTPSDFFRLMESESGEDLSWWWRGWYLNNWQLDMGITAAHYVDHDPSKGVQVTLRSRQ CCCCHHHHHHHHHCCCCCCCEEEEEEEEECCEEEECCCEEEEECCCCCCCCEEEEEECCC KLVMPVTLRADLADGSHLDRRVPVETWLQTTTPTVNLPTTQKVLHVTLDPDHVLPDADRS EEEEEEEEEEECCCCCCCCCCCCHHHHHCCCCCEEECCCCCEEEEEEECCCCCCCCCCCC DARVDVTG CCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA