| Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
|---|---|
| Accession | NC_007705 |
| Length | 4,940,217 |
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The map label for this gene is hisC [H]
Identifier: 84622780
GI number: 84622780
Start: 1216955
End: 1217326
Strand: Direct
Name: hisC [H]
Synonym: XOO_1123
Alternate gene names: 84622780
Gene position: 1216955-1217326 (Clockwise)
Preceding gene: 84622779
Following gene: 84622781
Centisome position: 24.63
GC content: 64.25
Gene sequence:
>372_bases ATGTGCGCGGCCGAAACCAACGTGGGTGTGATCTGCATCTGCAACCCCAACAACCCCACCGGCTCGGTCACCGCACGCAG GGATCTGGACGACGCGTTGGCGCACAAGCCCAAAGGCAGCGTATTGGTGGTGGACGAGGCCTATATCCACTTTGCGCAGA GCACGCGCAGCATGGTCGACATGGTTGCCGCTGGCGAGGACGTGGTGGTGTTGCGTACCTTCTCCAAACGCTACGGTATG TCCGGCATCCGCTGGGCTATGCGGCGGCGCGCCCGGATTTGCTGGCCAAGCGGACGTTCTACAGCGTCAACAGCTTGCCG GTCACCGCCGCCGCCGCAGGGCTGGCTAGCCTGCGCGATCCTGCGCTGGTAA
Upstream 100 bases:
>100_bases CCGACCCCACCTACGAATCCGGCTGGCGTGCGGCAACCCGCAATGGCGCGCGCCTGATCAAGGTGCCGCTGCGCAAGGAC TTTCGCACGATGTACAGGCC
Downstream 100 bases:
>100_bases CGCAGCGGCGCACACGTACAGCGGCAACCCGTCGTGACGTGATGGAGTTTCCCGGCAAGCACGGTTATGCCTGCACCACA TCGGAGAGCAACTGCTTTAT
Product: hypothetical protein
Products: NA
Alternate protein names: Imidazole acetol-phosphate transaminase [H]
Number of amino acids: Translated: 123; Mature: 123
Protein sequence:
>123_residues MCAAETNVGVICICNPNNPTGSVTARRDLDDALAHKPKGSVLVVDEAYIHFAQSTRSMVDMVAAGEDVVVLRTFSKRYGM SGIRWAMRRRARICWPSGRSTASTACRSPPPPQGWLACAILRW
Sequences:
>Translated_123_residues MCAAETNVGVICICNPNNPTGSVTARRDLDDALAHKPKGSVLVVDEAYIHFAQSTRSMVDMVAAGEDVVVLRTFSKRYGM SGIRWAMRRRARICWPSGRSTASTACRSPPPPQGWLACAILRW >Mature_123_residues MCAAETNVGVICICNPNNPTGSVTARRDLDDALAHKPKGSVLVVDEAYIHFAQSTRSMVDMVAAGEDVVVLRTFSKRYGM SGIRWAMRRRARICWPSGRSTASTACRSPPPPQGWLACAILRW
Specific function: Histidine biosynthesis; seventh step. [C]
COG id: COG0079
COG function: function code E; Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001917 - InterPro: IPR004839 - InterPro: IPR005861 - InterPro: IPR015424 - InterPro: IPR015421 - InterPro: IPR015422 [H]
Pfam domain/function: PF00155 Aminotran_1_2 [H]
EC number: =2.6.1.9 [H]
Molecular weight: Translated: 13465; Mature: 13465
Theoretical pI: Translated: 9.54; Mature: 9.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.9 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 8.9 %Cys+Met (Translated Protein) 4.9 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 8.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MCAAETNVGVICICNPNNPTGSVTARRDLDDALAHKPKGSVLVVDEAYIHFAQSTRSMVD CCCCCCCCCEEEEECCCCCCCCEEECCCCHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHH MVAAGEDVVVLRTFSKRYGMSGIRWAMRRRARICWPSGRSTASTACRSPPPPQGWLACAI HHHCCCCEEEEEECHHHHCCCHHHHHHHHCCEEECCCCCCCCCCCCCCCCCCCCCEEEEE LRW ECC >Mature Secondary Structure MCAAETNVGVICICNPNNPTGSVTARRDLDDALAHKPKGSVLVVDEAYIHFAQSTRSMVD CCCCCCCCCEEEEECCCCCCCCEEECCCCHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHH MVAAGEDVVVLRTFSKRYGMSGIRWAMRRRARICWPSGRSTASTACRSPPPPQGWLACAI HHHCCCCEEEEEECHHHHCCCHHHHHHHHCCEEECCCCCCCCCCCCCCCCCCCCCEEEEE LRW ECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA