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The map label for this gene is qseB [H]

Identifier: 84622740

GI number: 84622740

Start: 1182911

End: 1183609

Strand: Direct

Name: qseB [H]

Synonym: XOO_1083

Alternate gene names: 84622740

Gene position: 1182911-1183609 (Clockwise)

Preceding gene: 84622739

Following gene: 84622741

Centisome position: 23.94

GC content: 65.09

Gene sequence:

>699_bases
ATGCGCATTCTGCTGGTTGAAGACGATCTTTCACTGGGCGAAGGCATCCGCACCGCGCTGCGGCGCGCCGCCTATGCGGT
GGACTGGGTGCATGACGGCGTCAGTGCGTTGATGGCGCTACAGGAGCAGACCATGGATCTGGTCATCCTGGATTTGGGGT
TGCCGCGCATGGATGGCATCGAGGTCATTCGCACCGCACGCGCACGTGCGGTGGACACGCCGATTCTGGTACTCAGCGCA
CGCGAACGTGCAGCCGACCGCGCGCTTGGCCCGGATGTCGGTGCAGACGATTATCTGGGCAAGCCGTTCGACACCAATGA
ACTGTTGGCGCGCACGAGGGCCTTGCTGCGGCGCTCGGCCGGGCGCACGCAGCCTGCATTGCAGGCCGGCGCATTGCGGC
TGGATCCGGCTGGCATGTCGGTGCGCTGGCATGGCCGCGATCTGGATCTGACCCGTCGCGAATTCGCCCTGTTGTGGCTG
CTGATGGAGCAGCGTGGACGACCGATCGGTCGCGAACGCATCCAGCAGCATCTCTATGGATGGGACGAAGACGTCGCCAG
CAATGCGGTGGACGTGCATGTGCACCAGCTGCGTCGCAAGCTGTCGGCAGCCGTGATCCGCACCATTCGCGGTATTGGCT
ATGCACTGGACGAACAGGCCGCACAGGCCGCCGCGGCCCCGCCGCAGGCACCGCAATGA

Upstream 100 bases:

>100_bases
AAATTGCCGATGCCGGCCGCCGCAAGGAACTGGCCGCCAAGCTGGCAGATGTGCGGGCGCAGCTTGCCAAGCTAGTGAGC
AGACTTCCAGACTGCACTGC

Downstream 100 bases:

>100_bases
ATTCGATTCGACGTGTGTTGTTGCTGGCCTTGCTGGGCGTGTTGTCGCTGCTGATGTTGGCCGCAGCCGGTTTTAGCTAT
CGCGCAGGCCTGCAGGAAGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 232; Mature: 232

Protein sequence:

>232_residues
MRILLVEDDLSLGEGIRTALRRAAYAVDWVHDGVSALMALQEQTMDLVILDLGLPRMDGIEVIRTARARAVDTPILVLSA
RERAADRALGPDVGADDYLGKPFDTNELLARTRALLRRSAGRTQPALQAGALRLDPAGMSVRWHGRDLDLTRREFALLWL
LMEQRGRPIGRERIQQHLYGWDEDVASNAVDVHVHQLRRKLSAAVIRTIRGIGYALDEQAAQAAAAPPQAPQ

Sequences:

>Translated_232_residues
MRILLVEDDLSLGEGIRTALRRAAYAVDWVHDGVSALMALQEQTMDLVILDLGLPRMDGIEVIRTARARAVDTPILVLSA
RERAADRALGPDVGADDYLGKPFDTNELLARTRALLRRSAGRTQPALQAGALRLDPAGMSVRWHGRDLDLTRREFALLWL
LMEQRGRPIGRERIQQHLYGWDEDVASNAVDVHVHQLRRKLSAAVIRTIRGIGYALDEQAAQAAAAPPQAPQ
>Mature_232_residues
MRILLVEDDLSLGEGIRTALRRAAYAVDWVHDGVSALMALQEQTMDLVILDLGLPRMDGIEVIRTARARAVDTPILVLSA
RERAADRALGPDVGADDYLGKPFDTNELLARTRALLRRSAGRTQPALQAGALRLDPAGMSVRWHGRDLDLTRREFALLWL
LMEQRGRPIGRERIQQHLYGWDEDVASNAVDVHVHQLRRKLSAAVIRTIRGIGYALDEQAAQAAAAPPQAPQ

Specific function: Member of a two-component regulatory system qseB/qseC. Activates the flagella regulon by activating transcription of flhDC [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1789402, Length=219, Percent_Identity=47.945205479452, Blast_Score=197, Evalue=4e-52,
Organism=Escherichia coli, GI1790552, Length=216, Percent_Identity=43.0555555555556, Blast_Score=166, Evalue=1e-42,
Organism=Escherichia coli, GI87082012, Length=220, Percent_Identity=40.4545454545455, Blast_Score=145, Evalue=2e-36,
Organism=Escherichia coli, GI1788394, Length=220, Percent_Identity=36.8181818181818, Blast_Score=135, Evalue=3e-33,
Organism=Escherichia coli, GI1790860, Length=221, Percent_Identity=35.2941176470588, Blast_Score=131, Evalue=4e-32,
Organism=Escherichia coli, GI1786784, Length=222, Percent_Identity=35.5855855855856, Blast_Score=130, Evalue=1e-31,
Organism=Escherichia coli, GI1787375, Length=221, Percent_Identity=33.9366515837104, Blast_Score=124, Evalue=4e-30,
Organism=Escherichia coli, GI2367329, Length=228, Percent_Identity=36.4035087719298, Blast_Score=123, Evalue=1e-29,
Organism=Escherichia coli, GI1786599, Length=220, Percent_Identity=34.0909090909091, Blast_Score=119, Evalue=2e-28,
Organism=Escherichia coli, GI1789809, Length=234, Percent_Identity=29.0598290598291, Blast_Score=107, Evalue=8e-25,
Organism=Escherichia coli, GI1786911, Length=219, Percent_Identity=34.2465753424658, Blast_Score=101, Evalue=3e-23,
Organism=Escherichia coli, GI1787229, Length=222, Percent_Identity=31.5315315315315, Blast_Score=98, Evalue=6e-22,
Organism=Escherichia coli, GI1790863, Length=226, Percent_Identity=28.7610619469027, Blast_Score=92, Evalue=2e-20,
Organism=Escherichia coli, GI145693140, Length=230, Percent_Identity=29.5652173913043, Blast_Score=78, Evalue=5e-16,
Organism=Escherichia coli, GI1788550, Length=122, Percent_Identity=30.327868852459, Blast_Score=63, Evalue=2e-11,
Organism=Escherichia coli, GI1787487, Length=119, Percent_Identity=36.1344537815126, Blast_Score=62, Evalue=4e-11,
Organism=Escherichia coli, GI1790437, Length=108, Percent_Identity=34.2592592592593, Blast_Score=62, Evalue=5e-11,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR001867
- InterPro:   IPR001789
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00072 Response_reg; PF00486 Trans_reg_C [H]

EC number: NA

Molecular weight: Translated: 25687; Mature: 25687

Theoretical pI: Translated: 7.90; Mature: 7.90

Prosite motif: PS50110 RESPONSE_REGULATORY ; PS00104 EPSP_SYNTHASE_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRILLVEDDLSLGEGIRTALRRAAYAVDWVHDGVSALMALQEQTMDLVILDLGLPRMDGI
CEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEECCCCCCCHH
EVIRTARARAVDTPILVLSARERAADRALGPDVGADDYLGKPFDTNELLARTRALLRRSA
HHHHHHHHHHCCCCEEEEECHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHC
GRTQPALQAGALRLDPAGMSVRWHGRDLDLTRREFALLWLLMEQRGRPIGRERIQQHLYG
CCCCHHHHHCCEEECCCCCEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCC
WDEDVASNAVDVHVHQLRRKLSAAVIRTIRGIGYALDEQAAQAAAAPPQAPQ
CCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MRILLVEDDLSLGEGIRTALRRAAYAVDWVHDGVSALMALQEQTMDLVILDLGLPRMDGI
CEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEECCCCCCCHH
EVIRTARARAVDTPILVLSARERAADRALGPDVGADDYLGKPFDTNELLARTRALLRRSA
HHHHHHHHHHCCCCEEEEECHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHC
GRTQPALQAGALRLDPAGMSVRWHGRDLDLTRREFALLWLLMEQRGRPIGRERIQQHLYG
CCCCHHHHHCCEEECCCCCEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCC
WDEDVASNAVDVHVHQLRRKLSAAVIRTIRGIGYALDEQAAQAAAAPPQAPQ
CCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11677608; 12644504 [H]