| Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
|---|---|
| Accession | NC_007705 |
| Length | 4,940,217 |
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The map label for this gene is fhuE [H]
Identifier: 84622728
GI number: 84622728
Start: 1169654
End: 1170268
Strand: Direct
Name: fhuE [H]
Synonym: XOO_1071
Alternate gene names: 84622728
Gene position: 1169654-1170268 (Clockwise)
Preceding gene: 84622727
Following gene: 84622734
Centisome position: 23.68
GC content: 61.95
Gene sequence:
>615_bases GTGTCCTGTGCGTGGCAGCAGGAGAAATTCCTTTGCCAGTTCGACGGCATTCCGGCGTACATGGAGCAGGCCTGGAGTTA CGGCGCTTCGGCGCTGGATGTGGCCTTGTACGACCGCGTGGACGTGGTGCGTGGCGCCACCGGTCTGTTGACCGGCTCGG GCAACCCGTCGGCCTCGATCAATCTGGTGCGCAAGCATGCGGTCAGCCGCGACTTCACCGGTACCGTGTCGGTGGGCGGC GGCGACTTCAACAAGACCCGCGGCGTGGCCGATGTCACCGTGCCGCTGAGACCGGAAGGCACCGCGCGCGCACGTGTGGT GGGCGTGTATCGGGACGGCGAATCGGACATGGAGCGCTACAGCCTGCGCAAGAAGATCGGCTCAGCCATCGTCGATTTTT CGACGCGCGAGGTGATTGGCATAGGGCACAGACATCTTGCGAGAGATGTGTGTGTTTTTTGTGTGCCTGACTCAGAGCGG ATTGCAGCCATCGCGCAGGAAGTTCGTCGGTTGTTTTTTTGCGCGAACACAGCATCTCGCGTGCATGCAGTCTTCGCCTT GAGACAGCGTGCTGTGTCGACGGAACAGCCGCCATGCGGCACAGTGGTCATCTAG
Upstream 100 bases:
>100_bases GCACGCCTTGCGTGTTTCAGTGCACGTCGTTGGCCAGCGTCGCTGCACGCATCCTGGTCAGCACCTTCCGCTGTGCGTCC ATCATCGGCGGATTGGGATC
Downstream 100 bases:
>100_bases CCGAGCAACTATCTCACTGCAAGGGTTGATCGCCGTGCAACACGGGATAGGGATTCAACGCCTCTCCCTTCCACCACTGT TTTTCCGGCCCCAGCCGATG
Product: hypothetical protein
Products: NA
Alternate protein names: Outer-membrane receptor for Fe(III)-coprogen, Fe(III)-ferrioxamine B and Fe(III)-rhodotrulic acid [H]
Number of amino acids: Translated: 204; Mature: 203
Protein sequence:
>204_residues MSCAWQQEKFLCQFDGIPAYMEQAWSYGASALDVALYDRVDVVRGATGLLTGSGNPSASINLVRKHAVSRDFTGTVSVGG GDFNKTRGVADVTVPLRPEGTARARVVGVYRDGESDMERYSLRKKIGSAIVDFSTREVIGIGHRHLARDVCVFCVPDSER IAAIAQEVRRLFFCANTASRVHAVFALRQRAVSTEQPPCGTVVI
Sequences:
>Translated_204_residues MSCAWQQEKFLCQFDGIPAYMEQAWSYGASALDVALYDRVDVVRGATGLLTGSGNPSASINLVRKHAVSRDFTGTVSVGG GDFNKTRGVADVTVPLRPEGTARARVVGVYRDGESDMERYSLRKKIGSAIVDFSTREVIGIGHRHLARDVCVFCVPDSER IAAIAQEVRRLFFCANTASRVHAVFALRQRAVSTEQPPCGTVVI >Mature_203_residues SCAWQQEKFLCQFDGIPAYMEQAWSYGASALDVALYDRVDVVRGATGLLTGSGNPSASINLVRKHAVSRDFTGTVSVGGG DFNKTRGVADVTVPLRPEGTARARVVGVYRDGESDMERYSLRKKIGSAIVDFSTREVIGIGHRHLARDVCVFCVPDSERI AAIAQEVRRLFFCANTASRVHAVFALRQRAVSTEQPPCGTVVI
Specific function: Required for the uptake of Fe(3+) via coprogen, ferrioxamine B, and rhodotorulic acid [H]
COG id: COG4773
COG function: function code P; Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid
Gene ontology:
Cell location: Cell outer membrane [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the tonB-dependent receptor family [H]
Homologues:
Organism=Escherichia coli, GI1787344, Length=118, Percent_Identity=55.0847457627119, Blast_Score=137, Evalue=3e-34,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012910 - InterPro: IPR000531 - InterPro: IPR010916 - InterPro: IPR010917 - InterPro: IPR010105 [H]
Pfam domain/function: PF07715 Plug; PF00593 TonB_dep_Rec [H]
EC number: NA
Molecular weight: Translated: 22183; Mature: 22052
Theoretical pI: Translated: 8.60; Mature: 8.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 3.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSCAWQQEKFLCQFDGIPAYMEQAWSYGASALDVALYDRVDVVRGATGLLTGSGNPSASI CCCCCCCCCEEEEECCCHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCEEEECCCCCCCHH NLVRKHAVSRDFTGTVSVGGGDFNKTRGVADVTVPLRPEGTARARVVGVYRDGESDMERY HHHHHHHCCCCCCEEEEECCCCCCCCCCEEEEEEECCCCCCCCEEEEEEEECCHHHHHHH SLRKKIGSAIVDFSTREVIGIGHRHLARDVCVFCVPDSERIAAIAQEVRRLFFCANTASR HHHHHHHHHHHCCCCCHHEECCHHHHHCCEEEEECCCHHHHHHHHHHHHHHHHHCCCHHH VHAVFALRQRAVSTEQPPCGTVVI HHHHHHHHHHHCCCCCCCCCEEEC >Mature Secondary Structure SCAWQQEKFLCQFDGIPAYMEQAWSYGASALDVALYDRVDVVRGATGLLTGSGNPSASI CCCCCCCCEEEEECCCHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCEEEECCCCCCCHH NLVRKHAVSRDFTGTVSVGGGDFNKTRGVADVTVPLRPEGTARARVVGVYRDGESDMERY HHHHHHHCCCCCCEEEEECCCCCCCCCCEEEEEEECCCCCCCCEEEEEEEECCHHHHHHH SLRKKIGSAIVDFSTREVIGIGHRHLARDVCVFCVPDSERIAAIAQEVRRLFFCANTASR HHHHHHHHHHHCCCCCHHEECCHHHHHCCEEEEECCCHHHHHHHHHHHHHHHHHCCCHHH VHAVFALRQRAVSTEQPPCGTVVI HHHHHHHHHHHCCCCCCCCCEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 2162465; 8905232; 9278503; 3032906 [H]