| Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
|---|---|
| Accession | NC_007705 |
| Length | 4,940,217 |
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The map label for this gene is 84622723
Identifier: 84622723
GI number: 84622723
Start: 1160592
End: 1161599
Strand: Direct
Name: 84622723
Synonym: XOO_1066
Alternate gene names: NA
Gene position: 1160592-1161599 (Clockwise)
Preceding gene: 84622722
Following gene: 84622724
Centisome position: 23.49
GC content: 66.37
Gene sequence:
>1008_bases ATGAACTGGCTGCAGTGGTCGCAGTGGCAGGATGCGTTGGCGCACTGTGCCTGGCCGTGGGCCTGGTGGTTGGTGCCCTC GCCGTTGTTGATGTGGTTCTGGCCGCAACGTCGCGCCGATGCGGCCGCGCTACGCGTGCCGTATGCGGAGCAGTTGCAGG CGGTAGCGCAGGCGAAAATCACACCGTCGTTGCGGATGCCGCGTTGGCTGGCATGGCTGGGATGGTTTTTGTTGTGCGCT GCGCTGGCGCGTCCGCAGCAGCTGGGCGAGGTGATCCAGCCGCCGCGCGAGGCCCGCCAGATGATGTTGGCGGTGGATCT GTCGGGGAGCATGAACGAGCCGGACATGGTGCTCGGCGGCAAGGTGGTGGACCGGCTCACTGCCGCCAAGGCCGTGCTGT CGGACTTTCTGGATCGGCGCGACGGCGACCGCGTCGGCTTGCTGGTGTTCGGCCAACGTGCGTATGCGCTGACACCGTTG ACCGCCGATCTGACTTCCGTGCGCGATCAGTTGCGCGATAGCGTGGTGGGCTTGGCCGGGCGCGAAACCGCGATTGGCGA TGCGATCGCATTGTCGGTCAAGCGCCTGCGCGAACAGAAGCAGGGCCAGCGCGTGGTGGTGTTGCTCACCGATGGCGTCA ACACCGCCGGCGTGCTCGATCCGTTGAAAGCCGCGGAACTCGCCAAGGCCGAAGGCGTGCGCATACACACCATCGCGTTC GGTGGCGGTGGCGGCTCTTCCTTGTTCGGCGTGCCGATTCCGGCCGGCGGCAACGACGATATCGATGAAGACGGGCTGCG CAAGATTGCTCAGCAGACCGGGGGGCGTTTCTTCCGCGCCCGCGACACCGAAGAACTCGCCGGCATTTATGCCGAGCTGG ATCGGCTGGAGCCAGTCAAGGGGCTCGGGCCTTCGGTGCAGCCGCGCGTGGAGCGCTACTACTGGCCATTGGGTGCGGCC ATCGTCATCGCGCTGCTGGCGTATGTGCTGCCGCGGAGGTGGCGATGA
Upstream 100 bases:
>100_bases TGTTGGAAGGCGGTTTCCAACGTGCGCCCGCGGTAAGAGATCTGCCTGCGGTCGAAGCGCTGGCGCGGCTGCGGTTTGTG GCACTGATGCGGGGCAGGCG
Downstream 100 bases:
>100_bases ACGCGCTGACCGAGCTGGCGGGGCCGCTGCAGGCGTTGCATCTCCTGCGTCCGACGCTGTTGTTGGCGCTGCTGGCGATC GTGCCGGCGGCGGCGTTGTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 335; Mature: 335
Protein sequence:
>335_residues MNWLQWSQWQDALAHCAWPWAWWLVPSPLLMWFWPQRRADAAALRVPYAEQLQAVAQAKITPSLRMPRWLAWLGWFLLCA ALARPQQLGEVIQPPREARQMMLAVDLSGSMNEPDMVLGGKVVDRLTAAKAVLSDFLDRRDGDRVGLLVFGQRAYALTPL TADLTSVRDQLRDSVVGLAGRETAIGDAIALSVKRLREQKQGQRVVVLLTDGVNTAGVLDPLKAAELAKAEGVRIHTIAF GGGGGSSLFGVPIPAGGNDDIDEDGLRKIAQQTGGRFFRARDTEELAGIYAELDRLEPVKGLGPSVQPRVERYYWPLGAA IVIALLAYVLPRRWR
Sequences:
>Translated_335_residues MNWLQWSQWQDALAHCAWPWAWWLVPSPLLMWFWPQRRADAAALRVPYAEQLQAVAQAKITPSLRMPRWLAWLGWFLLCA ALARPQQLGEVIQPPREARQMMLAVDLSGSMNEPDMVLGGKVVDRLTAAKAVLSDFLDRRDGDRVGLLVFGQRAYALTPL TADLTSVRDQLRDSVVGLAGRETAIGDAIALSVKRLREQKQGQRVVVLLTDGVNTAGVLDPLKAAELAKAEGVRIHTIAF GGGGGSSLFGVPIPAGGNDDIDEDGLRKIAQQTGGRFFRARDTEELAGIYAELDRLEPVKGLGPSVQPRVERYYWPLGAA IVIALLAYVLPRRWR >Mature_335_residues MNWLQWSQWQDALAHCAWPWAWWLVPSPLLMWFWPQRRADAAALRVPYAEQLQAVAQAKITPSLRMPRWLAWLGWFLLCA ALARPQQLGEVIQPPREARQMMLAVDLSGSMNEPDMVLGGKVVDRLTAAKAVLSDFLDRRDGDRVGLLVFGQRAYALTPL TADLTSVRDQLRDSVVGLAGRETAIGDAIALSVKRLREQKQGQRVVVLLTDGVNTAGVLDPLKAAELAKAEGVRIHTIAF GGGGGSSLFGVPIPAGGNDDIDEDGLRKIAQQTGGRFFRARDTEELAGIYAELDRLEPVKGLGPSVQPRVERYYWPLGAA IVIALLAYVLPRRWR
Specific function: Unknown
COG id: COG2304
COG function: function code R; Uncharacterized protein containing a von Willebrand factor type A (vWA) domain
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 VWFA domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR022933 - InterPro: IPR002035 [H]
Pfam domain/function: PF00092 VWA [H]
EC number: NA
Molecular weight: Translated: 37016; Mature: 37016
Theoretical pI: Translated: 9.40; Mature: 9.40
Prosite motif: PS50234 VWFA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNWLQWSQWQDALAHCAWPWAWWLVPSPLLMWFWPQRRADAAALRVPYAEQLQAVAQAKI CCCCCHHHHHHHHHHHCCCHHHHHCCCCHHHHCCCCCCCCHHHHCCCHHHHHHHHHHHHC TPSLRMPRWLAWLGWFLLCAALARPQQLGEVIQPPREARQMMLAVDLSGSMNEPDMVLGG CCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHCCHHHHHHEEEEEECCCCCCCCCEEECH KVVDRLTAAKAVLSDFLDRRDGDRVGLLVFGQRAYALTPLTADLTSVRDQLRDSVVGLAG HHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCEEECCCHHHHHHHHHHHHHHHHCCCC RETAIGDAIALSVKRLREQKQGQRVVVLLTDGVNTAGVLDPLKAAELAKAEGVRIHTIAF CCHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCHHHHHHHHHHCCCEEEEEEE GGGGGSSLFGVPIPAGGNDDIDEDGLRKIAQQTGGRFFRARDTEELAGIYAELDRLEPVK ECCCCCCCEEEECCCCCCCCCCHHHHHHHHHHCCCCEEECCCHHHHHHHHHHHHHCCCCC GLGPSVQPRVERYYWPLGAAIVIALLAYVLPRRWR CCCCCCCHHHHHHHCCHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MNWLQWSQWQDALAHCAWPWAWWLVPSPLLMWFWPQRRADAAALRVPYAEQLQAVAQAKI CCCCCHHHHHHHHHHHCCCHHHHHCCCCHHHHCCCCCCCCHHHHCCCHHHHHHHHHHHHC TPSLRMPRWLAWLGWFLLCAALARPQQLGEVIQPPREARQMMLAVDLSGSMNEPDMVLGG CCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHCCHHHHHHEEEEEECCCCCCCCCEEECH KVVDRLTAAKAVLSDFLDRRDGDRVGLLVFGQRAYALTPLTADLTSVRDQLRDSVVGLAG HHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCEEECCCHHHHHHHHHHHHHHHHCCCC RETAIGDAIALSVKRLREQKQGQRVVVLLTDGVNTAGVLDPLKAAELAKAEGVRIHTIAF CCHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCHHHHHHHHHHCCCEEEEEEE GGGGGSSLFGVPIPAGGNDDIDEDGLRKIAQQTGGRFFRARDTEELAGIYAELDRLEPVK ECCCCCCCEEEECCCCCCCCCCHHHHHHHHHHCCCCEEECCCHHHHHHHHHHHHHCCCCC GLGPSVQPRVERYYWPLGAAIVIALLAYVLPRRWR CCCCCCCHHHHHHHCCHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA