Definition Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome.
Accession NC_007705
Length 4,940,217

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The map label for this gene is yaiN [C]

Identifier: 84622003

GI number: 84622003

Start: 375853

End: 376125

Strand: Direct

Name: yaiN [C]

Synonym: XOO_0346

Alternate gene names: 84622003

Gene position: 375853-376125 (Clockwise)

Preceding gene: 84622001

Following gene: 84622004

Centisome position: 7.61

GC content: 60.81

Gene sequence:

>273_bases
GTGGCGCATCTCAATCAGGACAAATCCAAGCTGCTTGCGCGCGTGCGCAGGATCCGTGGGCAAGTGGAAGGGCTGGAAAA
AGCCCTGGCCCAGGACGTGGAATGCACCGCGTTACTGACCCAGGTGGCCGCATTTCGCGGTGCGGCGCAGGGCTTGATGG
TCGAGCTGCTCAGCGAGCATCTCAAGCACCATGTTGCCGCACCCGAAGCATTGGGCGCGCGTGAGCGGGCAGTGGATGAC
ATCAGCGCCATCCTCAAGACCTATTTGAAATAG

Upstream 100 bases:

>100_bases
TGCGCGCAGTGGGGCGCGGGGTGCGTGATCGACATTGACGGTGGCTCTGGCTAAGGTACCCCTACAGGGTATCTTAAATA
CCCCTGGGGGGTATACGGCA

Downstream 100 bases:

>100_bases
AGGGGTCAACGAGCCGATCGGGCACGTCGGCAGGCGGGCGTGATCTGCGCTTGGTGCGGCATGCGGACGCTATTTCACGC
ATGCACCCGCATGCGGCAAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 90; Mature: 89

Protein sequence:

>90_residues
MAHLNQDKSKLLARVRRIRGQVEGLEKALAQDVECTALLTQVAAFRGAAQGLMVELLSEHLKHHVAAPEALGARERAVDD
ISAILKTYLK

Sequences:

>Translated_90_residues
MAHLNQDKSKLLARVRRIRGQVEGLEKALAQDVECTALLTQVAAFRGAAQGLMVELLSEHLKHHVAAPEALGARERAVDD
ISAILKTYLK
>Mature_89_residues
AHLNQDKSKLLARVRRIRGQVEGLEKALAQDVECTALLTQVAAFRGAAQGLMVELLSEHLKHHVAAPEALGARERAVDDI
SAILKTYLK

Specific function: Unknown

COG id: COG1937

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the frmR/rcnR family [H]

Homologues:

Organism=Escherichia coli, GI87081725, Length=92, Percent_Identity=44.5652173913043, Blast_Score=80, Evalue=3e-17,
Organism=Escherichia coli, GI1788422, Length=90, Percent_Identity=42.2222222222222, Blast_Score=70, Evalue=3e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003735 [H]

Pfam domain/function: PF02583 DUF156 [H]

EC number: NA

Molecular weight: Translated: 9855; Mature: 9723

Theoretical pI: Translated: 9.29; Mature: 9.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAHLNQDKSKLLARVRRIRGQVEGLEKALAQDVECTALLTQVAAFRGAAQGLMVELLSEH
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LKHHVAAPEALGARERAVDDISAILKTYLK
HHHHHCCCHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
AHLNQDKSKLLARVRRIRGQVEGLEKALAQDVECTALLTQVAAFRGAAQGLMVELLSEH
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LKHHVAAPEALGARERAVDDISAILKTYLK
HHHHHCCCHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA