| Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
|---|---|
| Accession | NC_007705 |
| Length | 4,940,217 |
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The map label for this gene is yaiN [C]
Identifier: 84622003
GI number: 84622003
Start: 375853
End: 376125
Strand: Direct
Name: yaiN [C]
Synonym: XOO_0346
Alternate gene names: 84622003
Gene position: 375853-376125 (Clockwise)
Preceding gene: 84622001
Following gene: 84622004
Centisome position: 7.61
GC content: 60.81
Gene sequence:
>273_bases GTGGCGCATCTCAATCAGGACAAATCCAAGCTGCTTGCGCGCGTGCGCAGGATCCGTGGGCAAGTGGAAGGGCTGGAAAA AGCCCTGGCCCAGGACGTGGAATGCACCGCGTTACTGACCCAGGTGGCCGCATTTCGCGGTGCGGCGCAGGGCTTGATGG TCGAGCTGCTCAGCGAGCATCTCAAGCACCATGTTGCCGCACCCGAAGCATTGGGCGCGCGTGAGCGGGCAGTGGATGAC ATCAGCGCCATCCTCAAGACCTATTTGAAATAG
Upstream 100 bases:
>100_bases TGCGCGCAGTGGGGCGCGGGGTGCGTGATCGACATTGACGGTGGCTCTGGCTAAGGTACCCCTACAGGGTATCTTAAATA CCCCTGGGGGGTATACGGCA
Downstream 100 bases:
>100_bases AGGGGTCAACGAGCCGATCGGGCACGTCGGCAGGCGGGCGTGATCTGCGCTTGGTGCGGCATGCGGACGCTATTTCACGC ATGCACCCGCATGCGGCAAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 90; Mature: 89
Protein sequence:
>90_residues MAHLNQDKSKLLARVRRIRGQVEGLEKALAQDVECTALLTQVAAFRGAAQGLMVELLSEHLKHHVAAPEALGARERAVDD ISAILKTYLK
Sequences:
>Translated_90_residues MAHLNQDKSKLLARVRRIRGQVEGLEKALAQDVECTALLTQVAAFRGAAQGLMVELLSEHLKHHVAAPEALGARERAVDD ISAILKTYLK >Mature_89_residues AHLNQDKSKLLARVRRIRGQVEGLEKALAQDVECTALLTQVAAFRGAAQGLMVELLSEHLKHHVAAPEALGARERAVDDI SAILKTYLK
Specific function: Unknown
COG id: COG1937
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the frmR/rcnR family [H]
Homologues:
Organism=Escherichia coli, GI87081725, Length=92, Percent_Identity=44.5652173913043, Blast_Score=80, Evalue=3e-17, Organism=Escherichia coli, GI1788422, Length=90, Percent_Identity=42.2222222222222, Blast_Score=70, Evalue=3e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003735 [H]
Pfam domain/function: PF02583 DUF156 [H]
EC number: NA
Molecular weight: Translated: 9855; Mature: 9723
Theoretical pI: Translated: 9.29; Mature: 9.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAHLNQDKSKLLARVRRIRGQVEGLEKALAQDVECTALLTQVAAFRGAAQGLMVELLSEH CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHH LKHHVAAPEALGARERAVDDISAILKTYLK HHHHHCCCHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure AHLNQDKSKLLARVRRIRGQVEGLEKALAQDVECTALLTQVAAFRGAAQGLMVELLSEH CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHH LKHHVAAPEALGARERAVDDISAILKTYLK HHHHHCCCHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA