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The map label for this gene is ychJ [C]

Identifier: 84621915

GI number: 84621915

Start: 282764

End: 283153

Strand: Direct

Name: ychJ [C]

Synonym: XOO_0258

Alternate gene names: 84621915

Gene position: 282764-283153 (Clockwise)

Preceding gene: 84621913

Following gene: 84621916

Centisome position: 5.72

GC content: 70.0

Gene sequence:

>390_bases
ATGCCGACGTCCATGCCTAACGATCCCTGTCCCTGCGGCCGCCCCGCCGATTACGCGCGGTGTTGCGGCCCGTACCACGC
TGGTGCCGCCGCGCCCGATGCCGAAACCCTGATGCGCGCGCGCTATAGCGCCCATGTGCGTCGCGACGCCGCGTACTTGC
TGGCTAGCTGGCATCCGTCCACGCGCCCAGGCGAGCTGTCGCTGGACGAAGGCGGGCGCACCACCTGGCTTGGCCTGACC
GTGCAGCGCACGCTCGAGACCGGTCCCGAGACAGCCGAGGTGGTCTTTCTGGCGCGCTATCGCATCGGTGGTGGCAGTGC
GGTGCGCATGACCGAGCACAGCCGTTTCGTGCGCGACGCCGGCCGCTGGTACTACCTCGACGCGCGCTGA

Upstream 100 bases:

>100_bases
CCCCTCGAAGTCTTCTCCGAGGAGGTCCTCAAAAGCGTTGCGAATCAGAGTTGAATTCGCCCAATTCCCAATTCCCAATT
CCATCCCGCACAATCCCCGC

Downstream 100 bases:

>100_bases
GTCCCACGCCGACCAAGCGTCACCTCGATTGGCAGCACAACCACCGCCGCAGTCGTACGCGGTCTACCCGCACGCGAGCC
GTTCAATACGCAGCCTACCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 129; Mature: 128

Protein sequence:

>129_residues
MPTSMPNDPCPCGRPADYARCCGPYHAGAAAPDAETLMRARYSAHVRRDAAYLLASWHPSTRPGELSLDEGGRTTWLGLT
VQRTLETGPETAEVVFLARYRIGGGSAVRMTEHSRFVRDAGRWYYLDAR

Sequences:

>Translated_129_residues
MPTSMPNDPCPCGRPADYARCCGPYHAGAAAPDAETLMRARYSAHVRRDAAYLLASWHPSTRPGELSLDEGGRTTWLGLT
VQRTLETGPETAEVVFLARYRIGGGSAVRMTEHSRFVRDAGRWYYLDAR
>Mature_128_residues
PTSMPNDPCPCGRPADYARCCGPYHAGAAAPDAETLMRARYSAHVRRDAAYLLASWHPSTRPGELSLDEGGRTTWLGLTV
QRTLETGPETAEVVFLARYRIGGGSAVRMTEHSRFVRDAGRWYYLDAR

Specific function: Unknown

COG id: COG3012

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0225 family

Homologues:

Organism=Escherichia coli, GI1787484, Length=123, Percent_Identity=43.9024390243902, Blast_Score=97, Evalue=3e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y258_XANOM (Q2P8W4)

Other databases:

- EMBL:   AP008229
- RefSeq:   YP_449287.1
- ProteinModelPortal:   Q2P8W4
- SMR:   Q2P8W4
- STRING:   Q2P8W4
- GeneID:   3859107
- GenomeReviews:   AP008229_GR
- KEGG:   xom:XOO_0258
- eggNOG:   COG3012
- HOGENOM:   HBG609508
- OMA:   FTARWHD
- PhylomeDB:   Q2P8W4
- ProtClustDB:   PRK04233
- BioCyc:   XORY342109:XOO0258-MONOMER
- HAMAP:   MF_00612
- InterPro:   IPR004027
- InterPro:   IPR023006

Pfam domain/function: PF02810 SEC-C

EC number: NA

Molecular weight: Translated: 14274; Mature: 14143

Theoretical pI: Translated: 8.32; Mature: 8.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.1 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
3.1 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPTSMPNDPCPCGRPADYARCCGPYHAGAAAPDAETLMRARYSAHVRRDAAYLLASWHPS
CCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHEEEEEECCCC
TRPGELSLDEGGRTTWLGLTVQRTLETGPETAEVVFLARYRIGGGSAVRMTEHSRFVRDA
CCCCEEEECCCCCEEEEEEEEEEHHHCCCCCEEEEEEEEEEECCCCEEEEHHHHHHHHCC
GRWYYLDAR
CCEEEEECC
>Mature Secondary Structure 
PTSMPNDPCPCGRPADYARCCGPYHAGAAAPDAETLMRARYSAHVRRDAAYLLASWHPS
CCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHEEEEEECCCC
TRPGELSLDEGGRTTWLGLTVQRTLETGPETAEVVFLARYRIGGGSAVRMTEHSRFVRDA
CCCCEEEECCCCCEEEEEEEEEEHHHCCCCCEEEEEEEEEEECCCCEEEEHHHHHHHHCC
GRWYYLDAR
CCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA