| Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
|---|---|
| Accession | NC_007705 |
| Length | 4,940,217 |
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The map label for this gene is insI1 [C]
Identifier: 84621913
GI number: 84621913
Start: 281702
End: 282016
Strand: Direct
Name: insI1 [C]
Synonym: XOO_0256
Alternate gene names: 84621913
Gene position: 281702-282016 (Clockwise)
Preceding gene: 84621912
Following gene: 84621915
Centisome position: 5.7
GC content: 65.71
Gene sequence:
>315_bases ATGTCATCCAGCCGCCTGGACCTGTCAGAACGATACCGCCTACATGCGTTATATGAAACCGGGATGTCGATGCGCGCCAT CGCCGATGCAGTGGCGCGTGCGCCCAGCACGATCAGTCGTGAGCTGCGCCGCAATCAGCACGCTGCGCGGTACCAGCCCG ATCACGCGCAGCGCATCAGCGCCCATCGGCGCACGCAGGCCAGCCGGCGTCCACGCATCGACGCCGAGCGTATCGGCCAG ATCGAGGTCCTGCTGAGGGAGGACGTCAGTCCCGAACAGATCGCCGGTCGCACCGGCTTGGCCAGTCACGCATGA
Upstream 100 bases:
>100_bases GTAGCCCGGGGCGGCTTCAACTCTGGATCGCAACACCAACGGTTGTGACGTGGTCCAGGCGATCTGACCTGAGCGACTTC ACTACCAAATGGAGTTGCCC
Downstream 100 bases:
>100_bases ATCTATCGGCACATCGACGCCGACCAGAAGCGTGGTGGTCAGTTGTTCATGCATCTACGCAAACGCCGCCGCAAGCGCCG TCGGCGTGGCGTGCGCGATG
Product: IS1112 transposase
Products: NA
Alternate protein names: Integrase Catalytic Region
Number of amino acids: Translated: 104; Mature: 103
Protein sequence:
>104_residues MSSSRLDLSERYRLHALYETGMSMRAIADAVARAPSTISRELRRNQHAARYQPDHAQRISAHRRTQASRRPRIDAERIGQ IEVLLREDVSPEQIAGRTGLASHA
Sequences:
>Translated_104_residues MSSSRLDLSERYRLHALYETGMSMRAIADAVARAPSTISRELRRNQHAARYQPDHAQRISAHRRTQASRRPRIDAERIGQ IEVLLREDVSPEQIAGRTGLASHA >Mature_103_residues SSSRLDLSERYRLHALYETGMSMRAIADAVARAPSTISRELRRNQHAARYQPDHAQRISAHRRTQASRRPRIDAERIGQI EVLLREDVSPEQIAGRTGLASHA
Specific function: Required For The Transposition Of The Insertion Element (Potential). [C]
COG id: COG2826
COG function: function code L; Transposase and inactivated derivatives, IS30 family
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11800; Mature: 11669
Theoretical pI: Translated: 11.62; Mature: 11.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSSRLDLSERYRLHALYETGMSMRAIADAVARAPSTISRELRRNQHAARYQPDHAQRIS CCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCHHHHHHH AHRRTQASRRPRIDAERIGQIEVLLREDVSPEQIAGRTGLASHA HHHHHHHHCCCCCCHHHHCHHHHHHHCCCCHHHHHCCCCCCCCC >Mature Secondary Structure SSSRLDLSERYRLHALYETGMSMRAIADAVARAPSTISRELRRNQHAARYQPDHAQRIS CCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCHHHHHHH AHRRTQASRRPRIDAERIGQIEVLLREDVSPEQIAGRTGLASHA HHHHHHHHCCCCCCHHHHCHHHHHHHCCCCHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA