| Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
|---|---|
| Accession | NC_007705 |
| Length | 4,940,217 |
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The map label for this gene is egl [H]
Identifier: 84621912
GI number: 84621912
Start: 280317
End: 281447
Strand: Direct
Name: egl [H]
Synonym: XOO_0255
Alternate gene names: 84621912
Gene position: 280317-281447 (Clockwise)
Preceding gene: 84621911
Following gene: 84621913
Centisome position: 5.67
GC content: 60.57
Gene sequence:
>1131_bases ATGTCTGCTTTCTGTTTTTCGTTGCGCGCGCTACTGCGCTACACGCTGCTTTTCATCGTGTTTGGCAACCTGTCGTTGGC CCACGCGCAGACGCGCGCGCTCACCTATGCCGGCGTCAATCTCTCGGGTGCCGAGTTCGCATCGTCCCAAAAACCCGGGG TCCTCAACAAGGACTACACCTATCCCGCGGCCAGCGATTACACCTATTTCGCCGGCGTTGGCATGAACACCATTCGCCTG CCGATCCTGTGGGAACGGCTGCAGCCCACCGCGCGCGGCAAGCTGGATCCAACCCAGCTAGCGTTGCTGCAACAGGCGGT GGCACGCGCCAAGGCGGCCGGCATGTATCTGGTGATCGATCTCCATAACTACGCCAAGTATTACGGCTACAAGATCGGCA GCCCGGAAGTACCGGTGTCCACGTTTACCGATGTCTGGCGTCGCCTCGCGCTGACGTTCAAAAGCGACAATGCGGTGATG TTCGGGCTGATGAATGAGCCCAACAATATTTCGGCCAGCGAATGGGCCGGCGCAGCGCAGGCCGCCATCGATGCGATCCG CAAGACCGGCGCCAACAACCTGATTCTGGTGCCGGGCGCACTGTGGACCGGCGCGCATAGTTGGTACTCCCCCACGTCCG ATGGCTACTCCAACGCCACCGCGTTGGCGTCCATCTACGATCCGCTCAATCGCTACGCTTTCGAGGTGCATCAGTATCTG GACGCCGATTCCAGCGGCACCAGCACCACCTGTGTCAGCGCCACGATCGGCGCCGATCGCTTGCGTAACTTCACCAAGTG GCTGCATACAAACCGTAAGCGCGGTTTCCTGGCCGAATTCGGTACCGCCAACAACGCGGTCTGCAACCAGGCGCTGAAAC GCATGTTGGCGCATATGGAAACCAACGCAGATGTATGGCTGGGTTGGACCTGGTGGTCAGCCGGTTCGTGGTGGAACACC ACCTATTCGTACAACGTGTATCCCAACAAGGACGGCACCGACAAACCGCAGATGGCGATCCTGTCGCCACAGGCCGCAAA AGCCACGCGTGCGCCGGGCGCTACCGCTGCGCGTACTTCCGCTACAGCTACTTCCAAGACGAGTACCTCCACTGCGCGCA CGACACGCTGA
Upstream 100 bases:
>100_bases GCAATTGGGCACGGCTGATGCATTGACTCAGACGGTGCAGAGCATCGCGCGCAACGCGCACGAACTTCGCTGCATCTGAC CCAGTCTGAGGAGTTTTGTC
Downstream 100 bases:
>100_bases TATCAGCCACAAGGACGCCGCAAAGCGGTTTTGTCTGTTGAGTGCACGCAGCGCGCGCGGTGTGAGTGATCTGCAAGATG GCAATACGCAGACGGACAAT
Product: cellulase
Products: NA
Alternate protein names: Cellulase; Endo-1,4-beta-glucanase [H]
Number of amino acids: Translated: 376; Mature: 375
Protein sequence:
>376_residues MSAFCFSLRALLRYTLLFIVFGNLSLAHAQTRALTYAGVNLSGAEFASSQKPGVLNKDYTYPAASDYTYFAGVGMNTIRL PILWERLQPTARGKLDPTQLALLQQAVARAKAAGMYLVIDLHNYAKYYGYKIGSPEVPVSTFTDVWRRLALTFKSDNAVM FGLMNEPNNISASEWAGAAQAAIDAIRKTGANNLILVPGALWTGAHSWYSPTSDGYSNATALASIYDPLNRYAFEVHQYL DADSSGTSTTCVSATIGADRLRNFTKWLHTNRKRGFLAEFGTANNAVCNQALKRMLAHMETNADVWLGWTWWSAGSWWNT TYSYNVYPNKDGTDKPQMAILSPQAAKATRAPGATAARTSATATSKTSTSTARTTR
Sequences:
>Translated_376_residues MSAFCFSLRALLRYTLLFIVFGNLSLAHAQTRALTYAGVNLSGAEFASSQKPGVLNKDYTYPAASDYTYFAGVGMNTIRL PILWERLQPTARGKLDPTQLALLQQAVARAKAAGMYLVIDLHNYAKYYGYKIGSPEVPVSTFTDVWRRLALTFKSDNAVM FGLMNEPNNISASEWAGAAQAAIDAIRKTGANNLILVPGALWTGAHSWYSPTSDGYSNATALASIYDPLNRYAFEVHQYL DADSSGTSTTCVSATIGADRLRNFTKWLHTNRKRGFLAEFGTANNAVCNQALKRMLAHMETNADVWLGWTWWSAGSWWNT TYSYNVYPNKDGTDKPQMAILSPQAAKATRAPGATAARTSATATSKTSTSTARTTR >Mature_375_residues SAFCFSLRALLRYTLLFIVFGNLSLAHAQTRALTYAGVNLSGAEFASSQKPGVLNKDYTYPAASDYTYFAGVGMNTIRLP ILWERLQPTARGKLDPTQLALLQQAVARAKAAGMYLVIDLHNYAKYYGYKIGSPEVPVSTFTDVWRRLALTFKSDNAVMF GLMNEPNNISASEWAGAAQAAIDAIRKTGANNLILVPGALWTGAHSWYSPTSDGYSNATALASIYDPLNRYAFEVHQYLD ADSSGTSTTCVSATIGADRLRNFTKWLHTNRKRGFLAEFGTANNAVCNQALKRMLAHMETNADVWLGWTWWSAGSWWNTT YSYNVYPNKDGTDKPQMAILSPQAAKATRAPGATAARTSATATSKTSTSTARTTR
Specific function: Unknown
COG id: COG2730
COG function: function code G; Endoglucanase
Gene ontology:
Cell location: Cell membrane; Lipid-anchor (Probable) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyl hydrolase 5 (cellulase A) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001547 - InterPro: IPR018087 - InterPro: IPR017853 - InterPro: IPR013781 [H]
Pfam domain/function: PF00150 Cellulase [H]
EC number: =3.2.1.4 [H]
Molecular weight: Translated: 41151; Mature: 41020
Theoretical pI: Translated: 9.83; Mature: 9.83
Prosite motif: PS00659 GLYCOSYL_HYDROL_F5
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAFCFSLRALLRYTLLFIVFGNLSLAHAQTRALTYAGVNLSGAEFASSQKPGVLNKDYT CCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHEEEEECCCCCCHHHCCCCCCCCCCCCCC YPAASDYTYFAGVGMNTIRLPILWERLQPTARGKLDPTQLALLQQAVARAKAAGMYLVID CCCCCCCEEEEECCCCEEEHHHHHHHCCHHHCCCCCHHHHHHHHHHHHHHHHCCEEEEEE LHNYAKYYGYKIGSPEVPVSTFTDVWRRLALTFKSDNAVMFGLMNEPNNISASEWAGAAQ EHHHHHHHCEECCCCCCCHHHHHHHHHHHEEEEECCCEEEEEEECCCCCCCHHHHHHHHH AAIDAIRKTGANNLILVPGALWTGAHSWYSPTSDGYSNATALASIYDPLNRYAFEVHQYL HHHHHHHHCCCCCEEEECCCHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH DADSSGTSTTCVSATIGADRLRNFTKWLHTNRKRGFLAEFGTANNAVCNQALKRMLAHME CCCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCCCCCEECCCCCHHHHHHHHHHHHHHHC TNADVWLGWTWWSAGSWWNTTYSYNVYPNKDGTDKPQMAILSPQAAKATRAPGATAARTS CCCCEEEEEEEECCCCCCCCEEEEEEECCCCCCCCCCEEEECCCHHHHCCCCCCCCCCCC ATATSKTSTSTARTTR CCCCCCCCCCCCCCCC >Mature Secondary Structure SAFCFSLRALLRYTLLFIVFGNLSLAHAQTRALTYAGVNLSGAEFASSQKPGVLNKDYT CHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHEEEEECCCCCCHHHCCCCCCCCCCCCCC YPAASDYTYFAGVGMNTIRLPILWERLQPTARGKLDPTQLALLQQAVARAKAAGMYLVID CCCCCCCEEEEECCCCEEEHHHHHHHCCHHHCCCCCHHHHHHHHHHHHHHHHCCEEEEEE LHNYAKYYGYKIGSPEVPVSTFTDVWRRLALTFKSDNAVMFGLMNEPNNISASEWAGAAQ EHHHHHHHCEECCCCCCCHHHHHHHHHHHEEEEECCCEEEEEEECCCCCCCHHHHHHHHH AAIDAIRKTGANNLILVPGALWTGAHSWYSPTSDGYSNATALASIYDPLNRYAFEVHQYL HHHHHHHHCCCCCEEEECCCHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH DADSSGTSTTCVSATIGADRLRNFTKWLHTNRKRGFLAEFGTANNAVCNQALKRMLAHME CCCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCCCCCEECCCCCHHHHHHHHHHHHHHHC TNADVWLGWTWWSAGSWWNTTYSYNVYPNKDGTDKPQMAILSPQAAKATRAPGATAARTS CCCCEEEEEEEECCCCCCCCEEEEEEECCCCCCCCCCEEEECCCHHHHCCCCCCCCCCCC ATATSKTSTSTARTTR CCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 1735723; 2738021; 2195024 [H]