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The map label for this gene is 84621895

Identifier: 84621895

GI number: 84621895

Start: 263899

End: 264252

Strand: Direct

Name: 84621895

Synonym: XOO_0238

Alternate gene names: NA

Gene position: 263899-264252 (Clockwise)

Preceding gene: 84621894

Following gene: 84621896

Centisome position: 5.34

GC content: 67.51

Gene sequence:

>354_bases
GTGAGCGCACCGGCGCGTCGTACGCTGGTGCGCGAGTGGATCGCAGGTGGCGCCAGCGAGCGCTGCGCCCTGGCAGCGAT
CGGCATGAGCGCCAGTGCGCTGCGCTATCGCCCGGGCGAGGACCGCAACGTTGAGTTGCGCGAGCACAGTGTTGCGTTGG
CGCATCGCCATCGCCGCTACGGCGTGGGGATGATCTCTCTCAAGCTGCGGCAGGAAGGTCGCCTCGTGAACTATAAGCGG
GTGGAGCGGCTGTATTGCGAGCAGCAGCTGCAAGTCCGGCGCCGCACGCGTAAAAAGGTGCCGGTAGGCGAGCGTGCACC
GTTGCTGCGGCCCACCAAGGCCAACCCGGTGTGA

Upstream 100 bases:

>100_bases
GGTTCAAGGACCTGGAGGCCGAGAACACGCGACTGAAGAAGTTGCTGGCCGAGCAGGTGTTTCAGAACGACCTGATCAAG
GATGCGCTGCAAAAACAATG

Downstream 100 bases:

>100_bases
TCCATGGACGTCGTGTTCGACCGCACCGCCGAAGGCAGGGCAATCAAATGCCTGGTGATCGTGGACGACACAACCCACGA
AGCGGTCGCCATCGACGTGG

Product: ISXoo3 transposase orfB

Products: NA

Alternate protein names: Integrase Catalytic Subunit; Integrase Catalytic Region; ISXoo3 Transposase ORF A; Transposase Related Protein; ISXoo3 Transposase OrfB; Pseudogene

Number of amino acids: Translated: 117; Mature: 116

Protein sequence:

>117_residues
MSAPARRTLVREWIAGGASERCALAAIGMSASALRYRPGEDRNVELREHSVALAHRHRRYGVGMISLKLRQEGRLVNYKR
VERLYCEQQLQVRRRTRKKVPVGERAPLLRPTKANPV

Sequences:

>Translated_117_residues
MSAPARRTLVREWIAGGASERCALAAIGMSASALRYRPGEDRNVELREHSVALAHRHRRYGVGMISLKLRQEGRLVNYKR
VERLYCEQQLQVRRRTRKKVPVGERAPLLRPTKANPV
>Mature_116_residues
SAPARRTLVREWIAGGASERCALAAIGMSASALRYRPGEDRNVELREHSVALAHRHRRYGVGMISLKLRQEGRLVNYKRV
ERLYCEQQLQVRRRTRKKVPVGERAPLLRPTKANPV

Specific function: Unknown

COG id: COG2801

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13399; Mature: 13268

Theoretical pI: Translated: 11.92; Mature: 11.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAPARRTLVREWIAGGASERCALAAIGMSASALRYRPGEDRNVELREHSVALAHRHRRY
CCCCHHHHHHHHHHCCCCCCCEEEEECCCCCCHHCCCCCCCCCEEHHHHHHHHHHHHHHC
GVGMISLKLRQEGRLVNYKRVERLYCEQQLQVRRRTRKKVPVGERAPLLRPTKANPV
CCCEEEEEECCCCCEECHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
SAPARRTLVREWIAGGASERCALAAIGMSASALRYRPGEDRNVELREHSVALAHRHRRY
CCCHHHHHHHHHHCCCCCCCEEEEECCCCCCHHCCCCCCCCCEEHHHHHHHHHHHHHHC
GVGMISLKLRQEGRLVNYKRVERLYCEQQLQVRRRTRKKVPVGERAPLLRPTKANPV
CCCEEEEEECCCCCEECHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA