| Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
|---|---|
| Accession | NC_007705 |
| Length | 4,940,217 |
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The map label for this gene is 84621893
Identifier: 84621893
GI number: 84621893
Start: 263258
End: 263590
Strand: Direct
Name: 84621893
Synonym: XOO_0236
Alternate gene names: NA
Gene position: 263258-263590 (Clockwise)
Preceding gene: 84621891
Following gene: 84621894
Centisome position: 5.33
GC content: 64.26
Gene sequence:
>333_bases ATGCGTCTGCATTCTTCCCTGCTGGCCCTGGGCCTGTTCACCGTCGCCAACCTGGCCAGCGCCGCCGATGTCGCCAAGTA CGACGGCTTTTTGTGCTGCAACCTGCGCACCGACGGCAGCTGGATCAGCGACAGCAACTACGCCGAAGATGGCAAGCGCA TGCTCCCGGTCGGCACCCCGGTCAGCGTCACCGGTTTCGGGCGCAACCCCGTCAATCTCAAGATCGCCGGCGAAAAGCAG TCCATCGGCAACGACTACAGCCGCGACCTGGACAACACCGCCTTTGCCGCCCGGTATGTCGTCACCGCCGACCCGACGTC CCCCCAAGTTTGA
Upstream 100 bases:
>100_bases GGCCCGGGGCTGCGACAATGCCCGCGCGCCGCGGGGAAACGGCGGCGCGCCCCGTCCATCATTGCCGCGCGGCTACGGCC GTCGAGAAAGGAGTCTTTCG
Downstream 100 bases:
>100_bases GTAGCACCTTAGTTTGGAGTCCAATTCCCTACCCCGAGGAGATGGGACGTGAAGAAGCGCTTTTCCGAAGAGCAGATCAT CGGCTTCCTGCGCGAAGCCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 110; Mature: 110
Protein sequence:
>110_residues MRLHSSLLALGLFTVANLASAADVAKYDGFLCCNLRTDGSWISDSNYAEDGKRMLPVGTPVSVTGFGRNPVNLKIAGEKQ SIGNDYSRDLDNTAFAARYVVTADPTSPQV
Sequences:
>Translated_110_residues MRLHSSLLALGLFTVANLASAADVAKYDGFLCCNLRTDGSWISDSNYAEDGKRMLPVGTPVSVTGFGRNPVNLKIAGEKQ SIGNDYSRDLDNTAFAARYVVTADPTSPQV >Mature_110_residues MRLHSSLLALGLFTVANLASAADVAKYDGFLCCNLRTDGSWISDSNYAEDGKRMLPVGTPVSVTGFGRNPVNLKIAGEKQ SIGNDYSRDLDNTAFAARYVVTADPTSPQV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11757; Mature: 11757
Theoretical pI: Translated: 5.78; Mature: 5.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLHSSLLALGLFTVANLASAADVAKYDGFLCCNLRTDGSWISDSNYAEDGKRMLPVGTP CCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCCEECCCCCC VSVTGFGRNPVNLKIAGEKQSIGNDYSRDLDNTAFAARYVVTADPTSPQV EEEEECCCCCEEEEECCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCC >Mature Secondary Structure MRLHSSLLALGLFTVANLASAADVAKYDGFLCCNLRTDGSWISDSNYAEDGKRMLPVGTP CCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCCEECCCCCC VSVTGFGRNPVNLKIAGEKQSIGNDYSRDLDNTAFAARYVVTADPTSPQV EEEEECCCCCEEEEECCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA