| Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
|---|---|
| Accession | NC_007705 |
| Length | 4,940,217 |
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The map label for this gene is 84621789
Identifier: 84621789
GI number: 84621789
Start: 133850
End: 134122
Strand: Direct
Name: 84621789
Synonym: XOO_0132
Alternate gene names: NA
Gene position: 133850-134122 (Clockwise)
Preceding gene: 84621788
Following gene: 84621790
Centisome position: 2.71
GC content: 65.57
Gene sequence:
>273_bases ATGGGGTTCGTTCGCGAGTACGCCACCCAGGCACCGGAACGCAGCGCGGTGGATACACGGGCCGGGCTGCAGATCCTGGA ATTCGGCACCGACTGGTGCGGCCACTGCATGGCTGCACAGCCGCTGCTGCACACGCTGTTGGGCGGATACGAGGCGATCG ACTATCGCAAGATCGAAGATGGAAGAGGGCGGCCGCTTGGCCGCTCTTTTCGCGTCACGTTGTGGCCCACGATCATCCTG CTGCGCGAGGGCGAGGAACTGGCGCGCGCGTGA
Upstream 100 bases:
>100_bases CCCAGCAGCGTCTGGTGGGCGATCTGGCCAAGGATCTGACCAACGTGACGCTGGCAGATATCCAGCGCGCCTTGTCGTAA TCGCGCGGCGCATCGAGACG
Downstream 100 bases:
>100_bases GACCGCAGACGCGTGAGGACCTGCAAGATATGTTGTCGGAGCTGGATGCGGGTTGATTGTTGAAGTGATGCTGCCTCTAG CATTGCGCTTGGATAAATGC
Product: thioredoxin
Products: NA
Alternate protein names: Thioredoxin Domain-Containing Protein; Thioredoxin Domain Protein; Thioredoxin Domain; Thioredoxin-Disulfide Reductase; Thioredoxin-Related; Thiol-Disulfide Isomerase/Thioredoxin; Thiol-Disulfide Isomerase And Thioredoxins; Thioredoxin Related Protein
Number of amino acids: Translated: 90; Mature: 89
Protein sequence:
>90_residues MGFVREYATQAPERSAVDTRAGLQILEFGTDWCGHCMAAQPLLHTLLGGYEAIDYRKIEDGRGRPLGRSFRVTLWPTIIL LREGEELARA
Sequences:
>Translated_90_residues MGFVREYATQAPERSAVDTRAGLQILEFGTDWCGHCMAAQPLLHTLLGGYEAIDYRKIEDGRGRPLGRSFRVTLWPTIIL LREGEELARA >Mature_89_residues GFVREYATQAPERSAVDTRAGLQILEFGTDWCGHCMAAQPLLHTLLGGYEAIDYRKIEDGRGRPLGRSFRVTLWPTIILL REGEELARA
Specific function: Unknown
COG id: COG0526
COG function: function code OC; Thiol-disulfide isomerase and thioredoxins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10120; Mature: 9989
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGFVREYATQAPERSAVDTRAGLQILEFGTDWCGHCMAAQPLLHTLLGGYEAIDYRKIED CCCHHHHHHCCCCCCCCHHHHCCHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCEECCC GRGRPLGRSFRVTLWPTIILLREGEELARA CCCCCCCCEEEEEEEEEEEEEECCHHHHCC >Mature Secondary Structure GFVREYATQAPERSAVDTRAGLQILEFGTDWCGHCMAAQPLLHTLLGGYEAIDYRKIED CCHHHHHHCCCCCCCCHHHHCCHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCEECCC GRGRPLGRSFRVTLWPTIILLREGEELARA CCCCCCCCEEEEEEEEEEEEEECCHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA