| Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
|---|---|
| Accession | NC_007705 |
| Length | 4,940,217 |
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The map label for this gene is 84621787
Identifier: 84621787
GI number: 84621787
Start: 132647
End: 133339
Strand: Direct
Name: 84621787
Synonym: XOO_0130
Alternate gene names: NA
Gene position: 132647-133339 (Clockwise)
Preceding gene: 84621786
Following gene: 84621788
Centisome position: 2.69
GC content: 67.24
Gene sequence:
>693_bases TTGCACACGCTGGAAGCGGCCGAGGACGGCTTCCAGCGCGCGCTGCGCTTTGCTGCGCGCGAGTTCGCCCAGGACCGCCC GATCAAGGATCTGTTCGCCATCCAGTCGCGCATCATCGAACACCTGCGCCTGGTGTTGAACGACCCCGGCCACAGCGTGG TGCCGGAGGTGCCGACCGATGCGGCGCGGATGCACCGGCTGTTTCATACCGAGATCGCGCAGCTCTCGCAGATGTGGGCC ACGCGTCCGCCCAACGCCACGCGCGAGGAGAATCTCAAGCGGCGCTGCATCGCCTGCGCCATCGATGCGCGCCCGGCGAT GGAGCTGCTGCATGACGCCCAGGCGCTGCGTGAACGCGTGTCGCTGGGCATGTTCAACGGCGAGGCGCCCACCTGCGTGG ACACTGCCGTTTCGCTGGAGCAGTTGGAACGCGAATTCGCCGCACTGTCGTTGTCGCGGCGCTACCAAGGCTCTACCTGG GGCGCTCATGCACGCGTACCGCGCGCACCGTGGACGCGCTGTATGCCACGCCGCTGCCGTCCGGCGATCTGCTGCAGGCG CTGGACGGCCTGTATCTGCTCGACGACGGCCAAGCGATCGAAGAACTGCGCGAGCGCCAACGCGCCACCTTTTCAGCAAG CACCTGGAGCTGCCGCCTCCGCAGTTCGAAGCACAGCACTCACGCGATGCTGA
Upstream 100 bases:
>100_bases GGCTATTTTCTGCGCTGCCGGAGCGAGGGGACCGCGCGCCCGGTGACAAGCCGACCTGGTCGCCGCATCGCTCACCGGCA GGGATGCGCTGGTACATGCA
Downstream 100 bases:
>100_bases CGCCGACTAGGCGCAAAACTTACATCTTCTCGCCTAGGTTGAGGCCGACTGGCGCTGCATCTGCAGCGTCATCATCAACC AGGAGAATCGGATGAGTCTG
Product: hypothetical protein
Products: NA
Alternate protein names: Membrane-Associated Peptidase
Number of amino acids: Translated: 230; Mature: 230
Protein sequence:
>230_residues MHTLEAAEDGFQRALRFAAREFAQDRPIKDLFAIQSRIIEHLRLVLNDPGHSVVPEVPTDAARMHRLFHTEIAQLSQMWA TRPPNATREENLKRRCIACAIDARPAMELLHDAQALRERVSLGMFNGEAPTCVDTAVSLEQLEREFAALSLSRRYQGSTW GAHARVPRAPWTRCMPRRCRPAICCRRWTACICSTTAKRSKNCASANAPPFQQAPGAAASAVRSTALTRC
Sequences:
>Translated_230_residues MHTLEAAEDGFQRALRFAAREFAQDRPIKDLFAIQSRIIEHLRLVLNDPGHSVVPEVPTDAARMHRLFHTEIAQLSQMWA TRPPNATREENLKRRCIACAIDARPAMELLHDAQALRERVSLGMFNGEAPTCVDTAVSLEQLEREFAALSLSRRYQGSTW GAHARVPRAPWTRCMPRRCRPAICCRRWTACICSTTAKRSKNCASANAPPFQQAPGAAASAVRSTALTRC >Mature_230_residues MHTLEAAEDGFQRALRFAAREFAQDRPIKDLFAIQSRIIEHLRLVLNDPGHSVVPEVPTDAARMHRLFHTEIAQLSQMWA TRPPNATREENLKRRCIACAIDARPAMELLHDAQALRERVSLGMFNGEAPTCVDTAVSLEQLEREFAALSLSRRYQGSTW GAHARVPRAPWTRCMPRRCRPAICCRRWTACICSTTAKRSKNCASANAPPFQQAPGAAASAVRSTALTRC
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25703; Mature: 25703
Theoretical pI: Translated: 9.41; Mature: 9.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.8 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 7.4 %Cys+Met (Translated Protein) 4.8 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 7.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHTLEAAEDGFQRALRFAAREFAQDRPIKDLFAIQSRIIEHLRLVLNDPGHSVVPEVPTD CCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCH AARMHRLFHTEIAQLSQMWATRPPNATREENLKRRCIACAIDARPAMELLHDAQALRERV HHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH SLGMFNGEAPTCVDTAVSLEQLEREFAALSLSRRYQGSTWGAHARVPRAPWTRCMPRRCR HHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHCHHHCC PAICCRRWTACICSTTAKRSKNCASANAPPFQQAPGAAASAVRSTALTRC HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCC >Mature Secondary Structure MHTLEAAEDGFQRALRFAAREFAQDRPIKDLFAIQSRIIEHLRLVLNDPGHSVVPEVPTD CCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCH AARMHRLFHTEIAQLSQMWATRPPNATREENLKRRCIACAIDARPAMELLHDAQALRERV HHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH SLGMFNGEAPTCVDTAVSLEQLEREFAALSLSRRYQGSTWGAHARVPRAPWTRCMPRRCR HHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHCHHHCC PAICCRRWTACICSTTAKRSKNCASANAPPFQQAPGAAASAVRSTALTRC HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA