| Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
|---|---|
| Accession | NC_007705 |
| Length | 4,940,217 |
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The map label for this gene is 84621696
Identifier: 84621696
GI number: 84621696
Start: 41819
End: 42070
Strand: Direct
Name: 84621696
Synonym: XOO_0039
Alternate gene names: NA
Gene position: 41819-42070 (Clockwise)
Preceding gene: 84621693
Following gene: 84621697
Centisome position: 0.85
GC content: 63.89
Gene sequence:
>252_bases ATGACCCGCTGGCAGGTCGCAGGCCAACCCAGCAATGCCATCGAGGCTGCGACCATCGCAGATGGCATTGCACGGACCAC AACGCTGGCGATGACTGGCCACGGCCGCGGCGAAGTCGCACTGGATGCATCAGACCTGGGAACGACACACCGATTGTTGT CGCCGCCGCTTGGCGGCACCATGGATCGGTCTGCGCTGCAAGCGCACCTGCACGTCGTTGCGGCATGCACGCCGTCGACA ATGTGCGGATAA
Upstream 100 bases:
>100_bases ATGAATACGTTGGCTTTTAAGATACTCCTGCTCTGTCGACAGCACGCTCGAAACATGCAATTTTGTAGACCCTTGCGAAC TTTCGGTAGCACTGAGCGCA
Downstream 100 bases:
>100_bases TCGCGCGATGTCACGGAAAGCAGATTTGCTGTCGCTACAGCTACCGCCCTTGTTCGAGTCCGCGCTCGCCAGGGCCGGTG TGCGCACGCTCACGCCGATC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 83; Mature: 82
Protein sequence:
>83_residues MTRWQVAGQPSNAIEAATIADGIARTTTLAMTGHGRGEVALDASDLGTTHRLLSPPLGGTMDRSALQAHLHVVAACTPST MCG
Sequences:
>Translated_83_residues MTRWQVAGQPSNAIEAATIADGIARTTTLAMTGHGRGEVALDASDLGTTHRLLSPPLGGTMDRSALQAHLHVVAACTPST MCG >Mature_82_residues TRWQVAGQPSNAIEAATIADGIARTTTLAMTGHGRGEVALDASDLGTTHRLLSPPLGGTMDRSALQAHLHVVAACTPSTM CG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8497; Mature: 8366
Theoretical pI: Translated: 6.94; Mature: 6.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 4.8 %Met (Translated Protein) 7.2 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 6.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRWQVAGQPSNAIEAATIADGIARTTTLAMTGHGRGEVALDASDLGTTHRLLSPPLGGT CCCCCCCCCCCCCCHHHHHHCCCCCEEEEEEECCCCCEEEEECCCCCCCCHHCCCCCCCC MDRSALQAHLHVVAACTPSTMCG CCHHHHHHHHHEEEECCCCCCCC >Mature Secondary Structure TRWQVAGQPSNAIEAATIADGIARTTTLAMTGHGRGEVALDASDLGTTHRLLSPPLGGT CCCCCCCCCCCCCHHHHHHCCCCCEEEEEEECCCCCEEEEECCCCCCCCHHCCCCCCCC MDRSALQAHLHVVAACTPSTMCG CCHHHHHHHHHEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA