Click here to switch to the map view.

The map label for this gene is sucB [C]

Identifier: 84621693

GI number: 84621693

Start: 39096

End: 39452

Strand: Direct

Name: sucB [C]

Synonym: XOO_0036

Alternate gene names: 84621693

Gene position: 39096-39452 (Clockwise)

Preceding gene: 84621692

Following gene: 84621696

Centisome position: 0.79

GC content: 64.43

Gene sequence:

>357_bases
ATGTCACCATGTTCACCGCTGAAAGTGCGTGCTAATCAGGTCCGCGAAAGCGTCAACCGGCTACGTCAGCAGGTGGAAAA
GCGCAGCATCGCCGCGTCCGAATTGAGCGGGTACACCATCTCGCTGTCCAACTTCGGCATGTTCGCCGGCCGCTACGCCA
CGCCGGTGGTGGTGCCGCCGTGCGTGGCGATCATGGCCGCCGGCCGTGCGCGCTACCAGATCACCCCGGTGATGGGCGGC
GTGGAAACCCACAAGGTGATGCCGCTGTCGTTGACCTTCGATCACTGCGCCGCCACCGGCGGTGAAGCAGCGCGCTTCCT
GCGCGCATTGCTGGACGATCTGGCGTTGGCCAACTGA

Upstream 100 bases:

>100_bases
ATGTGGCGGTTCAACCGCCGTTTCGATCTGACCCGGCTGGTGCCCAGCTTGCTGGCCGCCGCAGCCGCCAGCAAGCCGTG
GTCCGAGCGGGCCCTGCGTG

Downstream 100 bases:

>100_bases
GCACTTGCGCGGCGGGCCTTGCCGGCTCGCTGCGCAGGCTGAAGTAGGACGCTCTATCGCAATCCGGCGATATTGGCGCA
AACGGATGCATGCACGGAGC

Product: hypothetical protein

Products: CoA +S-succinyldihydrolipoamide [C]

Alternate protein names: Dihydrolipoamide Acetyltransferase; Di-Hydro-Lipoamide Acetyltransferase; Dehydrogenase Catalytic Domain-Containing Protein; Dihydrolipoamide Acetyltransferase Protein; Dihydrolipoyllysine-Residue Transferase

Number of amino acids: Translated: 118; Mature: 117

Protein sequence:

>118_residues
MSPCSPLKVRANQVRESVNRLRQQVEKRSIAASELSGYTISLSNFGMFAGRYATPVVVPPCVAIMAAGRARYQITPVMGG
VETHKVMPLSLTFDHCAATGGEAARFLRALLDDLALAN

Sequences:

>Translated_118_residues
MSPCSPLKVRANQVRESVNRLRQQVEKRSIAASELSGYTISLSNFGMFAGRYATPVVVPPCVAIMAAGRARYQITPVMGG
VETHKVMPLSLTFDHCAATGGEAARFLRALLDDLALAN
>Mature_117_residues
SPCSPLKVRANQVRESVNRLRQQVEKRSIAASELSGYTISLSNFGMFAGRYATPVVVPPCVAIMAAGRARYQITPVMGGV
ETHKVMPLSLTFDHCAATGGEAARFLRALLDDLALAN

Specific function: The 2-Oxoglutarate Dehydrogenase Complex Catalyzes The Overall Conversion Of 2-Oxoglutarate To Succinyl-CoA And Co(2). It Contains Multiple Copies Of Three Enzymatic Components: 2- Oxoglutarate Dehydrogenase (E1), Dihydrolipoamide Succinyltransferase (E2)

COG id: COG0508

COG function: function code C; Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 420 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 3096 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 3,000 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 2.3.1.61 [C]

Molecular weight: Translated: 12694; Mature: 12563

Theoretical pI: Translated: 9.76; Mature: 9.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
6.8 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSPCSPLKVRANQVRESVNRLRQQVEKRSIAASELSGYTISLSNFGMFAGRYATPVVVPP
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCHHCCCCCCCCCHHH
CVAIMAAGRARYQITPVMGGVETHKVMPLSLTFDHCAATGGEAARFLRALLDDLALAN
HHHHHHCCCCCEEEECCCCCCCCCEEEEEEEEHHHHHCCCHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SPCSPLKVRANQVRESVNRLRQQVEKRSIAASELSGYTISLSNFGMFAGRYATPVVVPP
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCHHCCCCCCCCCHHH
CVAIMAAGRARYQITPVMGGVETHKVMPLSLTFDHCAATGGEAARFLRALLDDLALAN
HHHHHHCCCCCEEEECCCCCCCCCEEEEEEEEHHHHHCCCHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: Lipoyl-protein polypeptide chain, covalently bound lipoyl moiety [C]

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Succinyl-CoA; dihydrolipoamide [C]

Specific reaction: Succinyl-CoA + dihydrolipoamide = CoA +S-succinyldihydrolipoamide [C]

General reaction: Acyl group transfer [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA