| Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
|---|---|
| Accession | NC_007705 |
| Length | 4,940,217 |
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The map label for this gene is 84621677
Identifier: 84621677
GI number: 84621677
Start: 22497
End: 23042
Strand: Direct
Name: 84621677
Synonym: XOO_0020
Alternate gene names: NA
Gene position: 22497-23042 (Clockwise)
Preceding gene: 84621676
Following gene: 84621683
Centisome position: 0.46
GC content: 66.3
Gene sequence:
>546_bases GTGAGGCCTGATACTGCCGAGCGGGCTGCTAGCCTCAGCCACGCATTGACGGCATGGAGCACGACGATGATGGTCTGGAA GCAAACGGTCATTGTGGCGGCGATGGCAGCCGGCCTGTTGGTCGGCAACGCAGCGTGGGCAGACCACATGGATATGTGCA TCGTGCGTGACGATCCGGCCGGCACCCCGGCCATCCCACAAATCCATGCGTGGTTGCAACCGCAAGCCAGGCGGATGACG CAGCCCAGGCAAACATCGCCGCCAGCCGATGCCGCCGCGCTGGGCGCCGTGCGCATCAGCACCGCCATCTTCGATCGACC GTTGAACACGCGCGCCGATACCGCGAGCAAGGCGGCCCCTCTGCCGGCACGCGGCCAGCGCAGCGCGATGAGATCAACAT CGACGCGTGCCATGCCGGCCAACGCGATCGTTGGGTGTCTGTCTGGGAGCAGCCTGGGGCCAGCGCAGCCTGGCAGATGC GCTCTCACCGGCAGCACAGGGCGACCGATTGCCAGGTGCCATCGGAAGAGCCCACGACCTCTATGA
Upstream 100 bases:
>100_bases TGATTGGCGGTGGGGCTAATCGCTGGATTGCCGCCGGTGCGCTCCAGCATCGCTCTGCACTTGCCGGACAGCATCCGGAT CGAGTCCGAGCAGGTCGGCA
Downstream 100 bases:
>100_bases TAAGGTCTGAACAACGAGGCCTGAAAGGGCGGGATGTCGCATCGTTCCGAACAGTAGCGTTTGGATCTTCGGAATTTCGC CACTTCTGGCGCTTTCCGTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 181; Mature: 181
Protein sequence:
>181_residues MRPDTAERAASLSHALTAWSTTMMVWKQTVIVAAMAAGLLVGNAAWADHMDMCIVRDDPAGTPAIPQIHAWLQPQARRMT QPRQTSPPADAAALGAVRISTAIFDRPLNTRADTASKAAPLPARGQRSAMRSTSTRAMPANAIVGCLSGSSLGPAQPGRC ALTGSTGRPIARCHRKSPRPL
Sequences:
>Translated_181_residues MRPDTAERAASLSHALTAWSTTMMVWKQTVIVAAMAAGLLVGNAAWADHMDMCIVRDDPAGTPAIPQIHAWLQPQARRMT QPRQTSPPADAAALGAVRISTAIFDRPLNTRADTASKAAPLPARGQRSAMRSTSTRAMPANAIVGCLSGSSLGPAQPGRC ALTGSTGRPIARCHRKSPRPL >Mature_181_residues MRPDTAERAASLSHALTAWSTTMMVWKQTVIVAAMAAGLLVGNAAWADHMDMCIVRDDPAGTPAIPQIHAWLQPQARRMT QPRQTSPPADAAALGAVRISTAIFDRPLNTRADTASKAAPLPARGQRSAMRSTSTRAMPANAIVGCLSGSSLGPAQPGRC ALTGSTGRPIARCHRKSPRPL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19053; Mature: 19053
Theoretical pI: Translated: 11.98; Mature: 11.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 5.0 %Met (Translated Protein) 7.2 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 5.0 %Met (Mature Protein) 7.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRPDTAERAASLSHALTAWSTTMMVWKQTVIVAAMAAGLLVGNAAWADHMDMCIVRDDPA CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCC GTPAIPQIHAWLQPQARRMTQPRQTSPPADAAALGAVRISTAIFDRPLNTRADTASKAAP CCCCCCHHHHHCCHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHCCC LPARGQRSAMRSTSTRAMPANAIVGCLSGSSLGPAQPGRCALTGSTGRPIARCHRKSPRP CCCCCHHHHHHHCCCCCCCHHHHHHHCCCCCCCCCCCCCEEEECCCCCHHHHHHCCCCCC L C >Mature Secondary Structure MRPDTAERAASLSHALTAWSTTMMVWKQTVIVAAMAAGLLVGNAAWADHMDMCIVRDDPA CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCC GTPAIPQIHAWLQPQARRMTQPRQTSPPADAAALGAVRISTAIFDRPLNTRADTASKAAP CCCCCCHHHHHCCHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHCCC LPARGQRSAMRSTSTRAMPANAIVGCLSGSSLGPAQPGRCALTGSTGRPIARCHRKSPRP CCCCCHHHHHHHCCCCCCCHHHHHHHCCCCCCCCCCCCCEEEECCCCCHHHHHHCCCCCC L C
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA