| Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
|---|---|
| Accession | NC_007705 |
| Length | 4,940,217 |
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The map label for this gene is 84621676
Identifier: 84621676
GI number: 84621676
Start: 21940
End: 22380
Strand: Direct
Name: 84621676
Synonym: XOO_0019
Alternate gene names: NA
Gene position: 21940-22380 (Clockwise)
Preceding gene: 84621675
Following gene: 84621677
Centisome position: 0.44
GC content: 66.21
Gene sequence:
>441_bases ATGAGAGCCGGCTCGATAACGCCAAACCACCACATCACGCGCCACACATCGCCGTCGCTGCCGCCGCAGATGTGCTTTCG TAGGAGCGCCCCCCGGCGCGACGAGGCTTTCCCGATCAGACCGCTCCCCACGCCATACCGCAGCACCATGATCGTCATCG ACCACGCCCCTGCCGACTGGTTCCTTCTCTGCGAGGGCGATCGCTGTTGGCTGGATATCAACGGCTCGATCTCGGCCACC GGCGTCTCGATCCTGCTATTGAACGCAAGCGAGCGTGCCCTCGTGCAGGCAGACCCGCATGCCGCGTGCGCAACGTCAGC GTCCCAAGTTCAAGCCCGGCCACACGACTACGCCGCCCGTGCTGGCAGCGCGGTAGACGGCAAGCGCGTGCGTGCGGCAG TACGCCAATGGCGTGCGAGAGGAAGTACGGCGGCCGGCTAG
Upstream 100 bases:
>100_bases CTATACGGTGGGGCTGCAGTGGGATTTTGGTGGGTGAGCAAGCACCCCACGCCCGCACGCCACCGCGCACCAGGCGCTTT GTAGGAGCACCCCGGGCGCG
Downstream 100 bases:
>100_bases TGCGCTACGCAAACGGTGATTGGCGGTGGGGCTAATCGCTGGATTGCCGCCGGTGCGCTCCAGCATCGCTCTGCACTTGC CGGACAGCATCCGGATCGAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 146; Mature: 146
Protein sequence:
>146_residues MRAGSITPNHHITRHTSPSLPPQMCFRRSAPRRDEAFPIRPLPTPYRSTMIVIDHAPADWFLLCEGDRCWLDINGSISAT GVSILLLNASERALVQADPHAACATSASQVQARPHDYAARAGSAVDGKRVRAAVRQWRARGSTAAG
Sequences:
>Translated_146_residues MRAGSITPNHHITRHTSPSLPPQMCFRRSAPRRDEAFPIRPLPTPYRSTMIVIDHAPADWFLLCEGDRCWLDINGSISAT GVSILLLNASERALVQADPHAACATSASQVQARPHDYAARAGSAVDGKRVRAAVRQWRARGSTAAG >Mature_146_residues MRAGSITPNHHITRHTSPSLPPQMCFRRSAPRRDEAFPIRPLPTPYRSTMIVIDHAPADWFLLCEGDRCWLDINGSISAT GVSILLLNASERALVQADPHAACATSASQVQARPHDYAARAGSAVDGKRVRAAVRQWRARGSTAAG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15863; Mature: 15863
Theoretical pI: Translated: 10.56; Mature: 10.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRAGSITPNHHITRHTSPSLPPQMCFRRSAPRRDEAFPIRPLPTPYRSTMIVIDHAPADW CCCCCCCCCCCEEECCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCE FLLCEGDRCWLDINGSISATGVSILLLNASERALVQADPHAACATSASQVQARPHDYAAR EEEECCCEEEEEECCCEECCCEEEEEECCCCCEEEEECCCCHHHCCHHHHCCCCCHHHHH AGSAVDGKRVRAAVRQWRARGSTAAG CCCCCCHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MRAGSITPNHHITRHTSPSLPPQMCFRRSAPRRDEAFPIRPLPTPYRSTMIVIDHAPADW CCCCCCCCCCCEEECCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCE FLLCEGDRCWLDINGSISATGVSILLLNASERALVQADPHAACATSASQVQARPHDYAAR EEEECCCEEEEEECCCEECCCEEEEEECCCCCEEEEECCCCHHHCCHHHHCCCCCHHHHH AGSAVDGKRVRAAVRQWRARGSTAAG CCCCCCHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA