| Definition | Methanosphaera stadtmanae DSM 3091 chromosome, complete genome. |
|---|---|
| Accession | NC_007681 |
| Length | 1,767,403 |
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The map label for this gene is fae-hps
Identifier: 84490278
GI number: 84490278
Start: 1681475
End: 1682695
Strand: Direct
Name: fae-hps
Synonym: Msp_1498
Alternate gene names: 84490278
Gene position: 1681475-1682695 (Clockwise)
Preceding gene: 84490276
Following gene: 84490280
Centisome position: 95.14
GC content: 33.5
Gene sequence:
>1221_bases ATGTCTGATATATATGAGATAGGTGAAGCTTTAATTGGTGATGGACCTGAATTAGCACATATTGATCTTATAGTTGGTAG TAAACAAGGACCTGTTGGTACTGCTTTTGCAACTAACATGGCAAGTATGAGTGTTGGTCATACTCCTTTATTATCTGTTA TTAGACCAAACTTACCTACTAAACCTGCTACTCTTATTGTACCTAAAGTAACTGTACAAAATCTAGATGATGCAAGTAAA ATATTTGGTCCAGCTCAAACTGCTGTTGGTCGTGCTGTAGCAGATGCTGTTGAAGAAGAAATAATTCCAAAGGATATTGT GGAAGATATTGTATTGATGGTTAATGTATTTATTGATCCTTCTGCTAAGGATTACCGTAAAATATACCAATACAATTATG GTGCTACTAAATTAGCTATTAAACGTGCATTTGATAAATATCCTTCTGTTGATAAGGTTTTAGCTGAAAAAGACAGAGGA ACACATCCAATTATGGGATTCAAAGCTATGAAATTATGGAACCCACCTTACTTACAAGTTGCATTAGATCTTGATAATGA AGATAGAATGCGTAGTATTATAAGAGATTTACCTAAACGTGAAAGAATTCTTATTGAAGCAGGTACACCTTTAGTTAAAA AATTTGGTGTTGAAATTATCAGTAAAATAAGAGAAGAAAGACCGGGTGCTTTCATTATTGCTGATCTTAAAACTTTAGAC GTTGGTAGAGTAGAAGTTAAAATGGCTGCTGATGAAACAGCTGATGCTGTTGCTATTTCTGGTCTTGGAACCAATGAATC CATTGAGAAAGCTATCCATGAATGTTCTAAACAAGGAATTTACTCTATTCTTGATATGATGAATGTAAGTGATATTCCTT CCAAACTTGAAGAACTTAAATTAAAACCTAATATAGTTTTATTACACAGAAATATTGATTCTGAGACTATGAGAGATAAT GATGGTGAACAACAATCTGAATGGGGTAACATCAAAGATATTAAATCTAAACTTGGTAAACGAGGTTTAATTGCTGTTGC TGGTGGAGTAACTCCTGAAAAAGTTGATACTGCCTTAGCTAATGGTGCTAATATTATTATTGCTGGAAGATATATTATTG GTTCATCTGATGTTAGAAGAGCTGCTGAAGATTTCCTCAGATACTTACCTCAAGATTCTGATACAATGAGATTAGCTCTC GATGAGGATGAAAAAATTTAG
Upstream 100 bases:
>100_bases AAATATATAAATATAATATTATTGAAAAACTTTTTTTTATAATTCATACATCTTGTGATGGAAAAAAGATTATAATTGAA TAAAATGGAGAATATAATTA
Downstream 100 bases:
>100_bases ATTTTCTTTTTTTTTCTTCTTTTTATTTTTTGTAATTGTTTTTGTATAGTTGAATTTATTTTTTAGTATATGTTATAAGT TATTTGTAATAAGTTATAAG
Product: bifunctional formaldehyde-activating enzyme/3-hexulose-6-phosphate synthase
Products: NA
Alternate protein names: Formaldehyde-activating enzyme; Fae; 3-hexulose-6-phosphate synthase; HPS; D-arabino-3-hexulose-6-phosphate formaldehyde lyase
Number of amino acids: Translated: 406; Mature: 405
Protein sequence:
>406_residues MSDIYEIGEALIGDGPELAHIDLIVGSKQGPVGTAFATNMASMSVGHTPLLSVIRPNLPTKPATLIVPKVTVQNLDDASK IFGPAQTAVGRAVADAVEEEIIPKDIVEDIVLMVNVFIDPSAKDYRKIYQYNYGATKLAIKRAFDKYPSVDKVLAEKDRG THPIMGFKAMKLWNPPYLQVALDLDNEDRMRSIIRDLPKRERILIEAGTPLVKKFGVEIISKIREERPGAFIIADLKTLD VGRVEVKMAADETADAVAISGLGTNESIEKAIHECSKQGIYSILDMMNVSDIPSKLEELKLKPNIVLLHRNIDSETMRDN DGEQQSEWGNIKDIKSKLGKRGLIAVAGGVTPEKVDTALANGANIIIAGRYIIGSSDVRRAAEDFLRYLPQDSDTMRLAL DEDEKI
Sequences:
>Translated_406_residues MSDIYEIGEALIGDGPELAHIDLIVGSKQGPVGTAFATNMASMSVGHTPLLSVIRPNLPTKPATLIVPKVTVQNLDDASK IFGPAQTAVGRAVADAVEEEIIPKDIVEDIVLMVNVFIDPSAKDYRKIYQYNYGATKLAIKRAFDKYPSVDKVLAEKDRG THPIMGFKAMKLWNPPYLQVALDLDNEDRMRSIIRDLPKRERILIEAGTPLVKKFGVEIISKIREERPGAFIIADLKTLD VGRVEVKMAADETADAVAISGLGTNESIEKAIHECSKQGIYSILDMMNVSDIPSKLEELKLKPNIVLLHRNIDSETMRDN DGEQQSEWGNIKDIKSKLGKRGLIAVAGGVTPEKVDTALANGANIIIAGRYIIGSSDVRRAAEDFLRYLPQDSDTMRLAL DEDEKI >Mature_405_residues SDIYEIGEALIGDGPELAHIDLIVGSKQGPVGTAFATNMASMSVGHTPLLSVIRPNLPTKPATLIVPKVTVQNLDDASKI FGPAQTAVGRAVADAVEEEIIPKDIVEDIVLMVNVFIDPSAKDYRKIYQYNYGATKLAIKRAFDKYPSVDKVLAEKDRGT HPIMGFKAMKLWNPPYLQVALDLDNEDRMRSIIRDLPKRERILIEAGTPLVKKFGVEIISKIREERPGAFIIADLKTLDV GRVEVKMAADETADAVAISGLGTNESIEKAIHECSKQGIYSILDMMNVSDIPSKLEELKLKPNIVLLHRNIDSETMRDND GEQQSEWGNIKDIKSKLGKRGLIAVAGGVTPEKVDTALANGANIIIAGRYIIGSSDVRRAAEDFLRYLPQDSDTMRLALD EDEKI
Specific function: Catalyzes the formation of ribulose-5-phosphate and formaldehyde from 3-hexulose-6-phosphate
COG id: COG0269
COG function: function code G; 3-hexulose-6-phosphate synthase and related proteins
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: In the C-terminal section; belongs to the HPS/KGPDC family. HPS subfamily
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): FAEHP_METST (Q2NE86)
Other databases:
- EMBL: CP000102 - RefSeq: YP_448510.1 - ProteinModelPortal: Q2NE86 - STRING: Q2NE86 - GeneID: 3854897 - GenomeReviews: CP000102_GR - KEGG: mst:Msp_1498 - NMPDR: fig|339860.6.peg.1432 - eggNOG: arNOG04867 - HOGENOM: HBG541183 - OMA: YNYGATK - ProtClustDB: PRK13307 - BioCyc: MSTA339860:MSP_1498-MONOMER - HAMAP: MF_01268 - InterPro: IPR013785 - InterPro: IPR020868 - InterPro: IPR014826 - InterPro: IPR001754 - InterPro: IPR020568 - InterPro: IPR000056 - InterPro: IPR011060 - Gene3D: G3DSA:3.20.20.70 - Gene3D: G3DSA:3.30.230.60 - PANTHER: PTHR11749 - SMART: SM00934 - TIGRFAMs: TIGR03126
Pfam domain/function: PF08714 Fae; PF00215 OMPdecase; SSF54211 Ribosomal_S5_D2-typ_fold; SSF51366 RibP_bind_barrel
EC number: =4.1.2.43
Molecular weight: Translated: 44586; Mature: 44455
Theoretical pI: Translated: 5.04; Mature: 5.04
Prosite motif: NA
Important sites: ACT_SITE 20-20 BINDING 22-22 BINDING 51-51 BINDING 69-69 BINDING 71-71 BINDING 86-86
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDIYEIGEALIGDGPELAHIDLIVGSKQGPVGTAFATNMASMSVGHTPLLSVIRPNLPT CCHHHHHHHHHHCCCCCEEEEEEEEECCCCCCCHHHHHHHHHHCCCCCHHHHHHCCCCCC KPATLIVPKVTVQNLDDASKIFGPAQTAVGRAVADAVEEEIIPKDIVEDIVLMVNVFIDP CCCEEEEECHHHCCCCHHHHHCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCC SAKDYRKIYQYNYGATKLAIKRAFDKYPSVDKVLAEKDRGTHPIMGFKAMKLWNPPYLQV CHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCEEHEECCCCEEEE ALDLDNEDRMRSIIRDLPKRERILIEAGTPLVKKFGVEIISKIREERPGAFIIADLKTLD EEECCCHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHHHCCCCEEEEEECEEEC VGRVEVKMAADETADAVAISGLGTNESIEKAIHECSKQGIYSILDMMNVSDIPSKLEELK CCCEEEEEECCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHC LKPNIVLLHRNIDSETMRDNDGEQQSEWGNIKDIKSKLGKRGLIAVAGGVTPEKVDTALA CCCCEEEEEECCCCHHHCCCCCCCHHHCCCHHHHHHHCCCCCEEEEECCCCHHHHHHHHH NGANIIIAGRYIIGSSDVRRAAEDFLRYLPQDSDTMRLALDEDEKI CCCEEEEEEEEEECCHHHHHHHHHHHHHCCCCCCCEEEEECCCCCC >Mature Secondary Structure SDIYEIGEALIGDGPELAHIDLIVGSKQGPVGTAFATNMASMSVGHTPLLSVIRPNLPT CHHHHHHHHHHCCCCCEEEEEEEEECCCCCCCHHHHHHHHHHCCCCCHHHHHHCCCCCC KPATLIVPKVTVQNLDDASKIFGPAQTAVGRAVADAVEEEIIPKDIVEDIVLMVNVFIDP CCCEEEEECHHHCCCCHHHHHCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCC SAKDYRKIYQYNYGATKLAIKRAFDKYPSVDKVLAEKDRGTHPIMGFKAMKLWNPPYLQV CHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCEEHEECCCCEEEE ALDLDNEDRMRSIIRDLPKRERILIEAGTPLVKKFGVEIISKIREERPGAFIIADLKTLD EEECCCHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHHHCCCCEEEEEECEEEC VGRVEVKMAADETADAVAISGLGTNESIEKAIHECSKQGIYSILDMMNVSDIPSKLEELK CCCEEEEEECCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHC LKPNIVLLHRNIDSETMRDNDGEQQSEWGNIKDIKSKLGKRGLIAVAGGVTPEKVDTALA CCCCEEEEEECCCCHHHCCCCCCCHHHCCCHHHHHHHCCCCCEEEEECCCCHHHHHHHHH NGANIIIAGRYIIGSSDVRRAAEDFLRYLPQDSDTMRLALDEDEKI CCCEEEEEEEEEECCHHHHHHHHHHHHHCCCCCCCEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA