| Definition | Methanosphaera stadtmanae DSM 3091 chromosome, complete genome. |
|---|---|
| Accession | NC_007681 |
| Length | 1,767,403 |
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The map label for this gene is 84490273
Identifier: 84490273
GI number: 84490273
Start: 1675393
End: 1676178
Strand: Direct
Name: 84490273
Synonym: Msp_1492
Alternate gene names: NA
Gene position: 1675393-1676178 (Clockwise)
Preceding gene: 84490271
Following gene: 84490276
Centisome position: 94.79
GC content: 30.03
Gene sequence:
>786_bases ATGAAAAATATATTAAAAGAATTAATTGATGGCAAAATTTCTATTTCAGATGCTGAAGATAAATTAAAAATCATGCAAAT ACAAGAAATGGGTAGTCATGTTAAGTTTGATACTATGCGAGAAATAAGAGTTGGTGTTCCTGAAGCTATTTATTCACAAG GAAAAACCGATGAGGACCTAATAAACATAATCAACAATATTGATTTTACAAAACATTTAATGATAACAAGATTACCAGAA GAACGTTTTAATAGAATAAAATATCAGTTAAACAAAAACGTTTTAAAAAATGGAACATACTACAAAGAAGCATGTATATT AACTATTAATAAAACAACTCCAAAGGAAAAAAAAGGTACAGTTGGCATAATTACAGCAGGAACTGCAGATGTTCCAATAG CAGAGGAAGCCAGAATAACAATAGAACAAGCAGGTTATAAAACTATACCAACATATGATGTAGGAGTTGCAGGAATACAT AGATTAATAGATAAAATCACATATCTTATTGATAAAAAAACAGATATTATCATTACAATAGCAGGAATGGAAGGAGCATT ACCATCAGTTGTAGCAGGAATTGTAGACATTCCAGTAGTTGCAGTTCCAACATCAACAGGATATGGAGTAGGTGAAAAAG GATTCACAGCATTATTTGCTATGCTACAATCATGTGCACCTGGAATTGCCACTATGAATATAGATAATGGTTATGGAGCT GGAATATATTCTGTTACAATATTAAATCAAATAGAAAAAAGAATTAAAGACATGACAGAACAATAA
Upstream 100 bases:
>100_bases TCAATAATATATTTAATAGTAAAATAATTAAGATTAATAATAAATATTAAATTAAATAAGAATGCTGAAAACATGATAAA TATCTAAATTGAGGAGTTTT
Downstream 100 bases:
>100_bases ATTTAGGAATGTAGTCAATGATTTCAAGTGTAACATTCTTGAAGATATAATATTAAAATAGCAATCTTTATATATAAGTT AGGAATAAACTATAATATAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 261; Mature: 261
Protein sequence:
>261_residues MKNILKELIDGKISISDAEDKLKIMQIQEMGSHVKFDTMREIRVGVPEAIYSQGKTDEDLINIINNIDFTKHLMITRLPE ERFNRIKYQLNKNVLKNGTYYKEACILTINKTTPKEKKGTVGIITAGTADVPIAEEARITIEQAGYKTIPTYDVGVAGIH RLIDKITYLIDKKTDIIITIAGMEGALPSVVAGIVDIPVVAVPTSTGYGVGEKGFTALFAMLQSCAPGIATMNIDNGYGA GIYSVTILNQIEKRIKDMTEQ
Sequences:
>Translated_261_residues MKNILKELIDGKISISDAEDKLKIMQIQEMGSHVKFDTMREIRVGVPEAIYSQGKTDEDLINIINNIDFTKHLMITRLPE ERFNRIKYQLNKNVLKNGTYYKEACILTINKTTPKEKKGTVGIITAGTADVPIAEEARITIEQAGYKTIPTYDVGVAGIH RLIDKITYLIDKKTDIIITIAGMEGALPSVVAGIVDIPVVAVPTSTGYGVGEKGFTALFAMLQSCAPGIATMNIDNGYGA GIYSVTILNQIEKRIKDMTEQ >Mature_261_residues MKNILKELIDGKISISDAEDKLKIMQIQEMGSHVKFDTMREIRVGVPEAIYSQGKTDEDLINIINNIDFTKHLMITRLPE ERFNRIKYQLNKNVLKNGTYYKEACILTINKTTPKEKKGTVGIITAGTADVPIAEEARITIEQAGYKTIPTYDVGVAGIH RLIDKITYLIDKKTDIIITIAGMEGALPSVVAGIVDIPVVAVPTSTGYGVGEKGFTALFAMLQSCAPGIATMNIDNGYGA GIYSVTILNQIEKRIKDMTEQ
Specific function: Unknown
COG id: COG1691
COG function: function code R; NCAIR mutase (PurE)-related proteins
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000031 [H]
Pfam domain/function: PF00731 AIRC [H]
EC number: NA
Molecular weight: Translated: 28712; Mature: 28712
Theoretical pI: Translated: 6.80; Mature: 6.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNILKELIDGKISISDAEDKLKIMQIQEMGSHVKFDTMREIRVGVPEAIYSQGKTDEDL CHHHHHHHHCCCEEECCCHHHHHHHHHHHHCCCCCHHHHHHHHCCCCHHHHHCCCCHHHH INIINNIDFTKHLMITRLPEERFNRIKYQLNKNVLKNGTYYKEACILTINKTTPKEKKGT HHHHHCCCHHHHHHHEECCHHHHHHHHHHHHHHHHHCCCEEEEEEEEEEECCCCCCCCCC VGIITAGTADVPIAEEARITIEQAGYKTIPTYDVGVAGIHRLIDKITYLIDKKTDIIITI EEEEECCCCCCCCCCCCEEEEECCCCEECCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEE AGMEGALPSVVAGIVDIPVVAVPTSTGYGVGEKGFTALFAMLQSCAPGIATMNIDNGYGA ECCCCCHHHHHHHHHHCCEEEEECCCCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCC GIYSVTILNQIEKRIKDMTEQ CHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MKNILKELIDGKISISDAEDKLKIMQIQEMGSHVKFDTMREIRVGVPEAIYSQGKTDEDL CHHHHHHHHCCCEEECCCHHHHHHHHHHHHCCCCCHHHHHHHHCCCCHHHHHCCCCHHHH INIINNIDFTKHLMITRLPEERFNRIKYQLNKNVLKNGTYYKEACILTINKTTPKEKKGT HHHHHCCCHHHHHHHEECCHHHHHHHHHHHHHHHHHCCCEEEEEEEEEEECCCCCCCCCC VGIITAGTADVPIAEEARITIEQAGYKTIPTYDVGVAGIHRLIDKITYLIDKKTDIIITI EEEEECCCCCCCCCCCCEEEEECCCCEECCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEE AGMEGALPSVVAGIVDIPVVAVPTSTGYGVGEKGFTALFAMLQSCAPGIATMNIDNGYGA ECCCCCHHHHHHHHHHCCEEEEECCCCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCC GIYSVTILNQIEKRIKDMTEQ CHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]