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The map label for this gene is rps8e

Identifier: 84490068

GI number: 84490068

Start: 1444222

End: 1444602

Strand: Direct

Name: rps8e

Synonym: Msp_1280

Alternate gene names: 84490068

Gene position: 1444222-1444602 (Clockwise)

Preceding gene: 84490063

Following gene: 84490069

Centisome position: 81.71

GC content: 33.86

Gene sequence:

>381_bases
ATGGCAATATGGCAAGGAAGCTCTTTAAGAAAACCATCAGGAGCAAGATCAAGAAGAAATAAAAATAAAAGAAATGCTGA
ATTCGGAAGAAATCCAGCAGAAACAAGGATTGGAGACGAAGTTAAAAAAGAAATAGTAGCAAGAGGAAACTGTACCAAAA
CAAGAGCTACCGTAGCAAAAAGAATCAATGTTATTGATCCTAAAGACAACTCCAGTAAAAACGTTGAAATGTTAACAGTA
CTTGAAAATGGAGCTAACAGCCACTTTGTAAGAAGAAACATTATTACAAAAGGAGCTATTGTTGAAACAGAAATTGGTAA
AGCAAAAATAACTTCCAGACCAGGTCAAAAAGGAATAGTTAATGGTGTATTAATCGAATGA

Upstream 100 bases:

>100_bases
AAGATAACTTTTTAGAAGTTACATAATTTTTTTAATACAGAATTACTAAGTTATACTATAATTACACAGTATAACCTAAT
ATAAATTTGAGGTGACAAAT

Downstream 100 bases:

>100_bases
GCATTCCAAAAAAAATTGAAAAACAGGTTACGGAGCTACTTAGCTCCATAAACCAAAATTTACCCCAAGACATGGAGCTT
GAGTTAGAAGGCTATTATGA

Product: 30S ribosomal protein S8e

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 126; Mature: 125

Protein sequence:

>126_residues
MAIWQGSSLRKPSGARSRRNKNKRNAEFGRNPAETRIGDEVKKEIVARGNCTKTRATVAKRINVIDPKDNSSKNVEMLTV
LENGANSHFVRRNIITKGAIVETEIGKAKITSRPGQKGIVNGVLIE

Sequences:

>Translated_126_residues
MAIWQGSSLRKPSGARSRRNKNKRNAEFGRNPAETRIGDEVKKEIVARGNCTKTRATVAKRINVIDPKDNSSKNVEMLTV
LENGANSHFVRRNIITKGAIVETEIGKAKITSRPGQKGIVNGVLIE
>Mature_125_residues
AIWQGSSLRKPSGARSRRNKNKRNAEFGRNPAETRIGDEVKKEIVARGNCTKTRATVAKRINVIDPKDNSSKNVEMLTVL
ENGANSHFVRRNIITKGAIVETEIGKAKITSRPGQKGIVNGVLIE

Specific function: Unknown

COG id: COG2007

COG function: function code J; Ribosomal protein S8E

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein S8e family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RS8E_METST (Q2NEU6)

Other databases:

- EMBL:   CP000102
- RefSeq:   YP_448300.1
- ProteinModelPortal:   Q2NEU6
- STRING:   Q2NEU6
- GeneID:   3856152
- GenomeReviews:   CP000102_GR
- KEGG:   mst:Msp_1280
- NMPDR:   fig|339860.6.peg.1227
- eggNOG:   arNOG11360
- HOGENOM:   HBG745393
- OMA:   GGNRKVR
- ProtClustDB:   PRK04049
- BioCyc:   MSTA339860:MSP_1280-MONOMER
- GO:   GO:0005840
- GO:   GO:0006412
- HAMAP:   MF_00029
- InterPro:   IPR020919
- InterPro:   IPR001047
- InterPro:   IPR022309
- PANTHER:   PTHR10394:SF2
- TIGRFAMs:   TIGR00307

Pfam domain/function: PF01201 Ribosomal_S8e

EC number: NA

Molecular weight: Translated: 13865; Mature: 13734

Theoretical pI: Translated: 11.50; Mature: 11.50

Prosite motif: PS01193 RIBOSOMAL_S8E

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAIWQGSSLRKPSGARSRRNKNKRNAEFGRNPAETRIGDEVKKEIVARGNCTKTRATVAK
CCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCHHHCCHHHHHHHHHCCCCCHHHHHHHH
RINVIDPKDNSSKNVEMLTVLENGANSHFVRRNIITKGAIVETEIGKAKITSRPGQKGIV
HCCCCCCCCCCCCCEEEEEEEECCCCCCCHHHHHCCCCCEEECCCCCEEECCCCCCCCCC
NGVLIE
CCEEEC
>Mature Secondary Structure 
AIWQGSSLRKPSGARSRRNKNKRNAEFGRNPAETRIGDEVKKEIVARGNCTKTRATVAK
CCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCHHHCCHHHHHHHHHCCCCCHHHHHHHH
RINVIDPKDNSSKNVEMLTVLENGANSHFVRRNIITKGAIVETEIGKAKITSRPGQKGIV
HCCCCCCCCCCCCCEEEEEEEECCCCCCCHHHHHCCCCCEEECCCCCEEECCCCCCCCCC
NGVLIE
CCEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA