| Definition | Methanosphaera stadtmanae DSM 3091 chromosome, complete genome. |
|---|---|
| Accession | NC_007681 |
| Length | 1,767,403 |
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The map label for this gene is 84490063
Identifier: 84490063
GI number: 84490063
Start: 1438961
End: 1439974
Strand: Direct
Name: 84490063
Synonym: Msp_1275
Alternate gene names: NA
Gene position: 1438961-1439974 (Clockwise)
Preceding gene: 84490062
Following gene: 84490068
Centisome position: 81.42
GC content: 25.15
Gene sequence:
>1014_bases ATGAAAATAGAAGAGAAGATAGAGAAATTAAAAGAATATTTGAAAGATAAAAAATCAATACTAGCATTTAGTGCTGGTTC AGACAGTACACTCATAGCATACATTTTATCACAAGTAAGTCCCAATTCAGTACTTGTTACAATAGACAATAACATGATGC CAAAAGACTTTATAAATTATACAAAAGAAAAAGCAAAAGAATTAAATTTAAAACATGACGTAATAAATGTTAACTTTCTA AAAAACCCAGAATTCATATCAAACAACCAAAAACGCTGTTATAACTGTAGAAAAATAATGTACTTAAAAATCCAAGAACT ATCCTATTTTAATGAATATGATTATTTCTTAGAAGGAACCAATCTAACAGACCTTCTTGAAGATAGACCTGGAATTTTAG TAAGAAAAACATACAACATGACAAGTCCCCTAATAGAATGTGGTATAACAAAAAATGATGTATTTAATATGATAAAATAC TTAAATCTCACATACTCCCATAACACAACATGTCTTGCAACTAGAGTAAAAACAAATGAAGAAGTAAGCATGGAAAAATT TAAATTAATAGATGAAGCTGAAACATATCTAAAAAAATACATAAAACAAGAAAATATCCGAGTTAGATTTGATTCATATA CTGCAACAATATCAATAGATGAACCTCTTGAAGTACTAGATAAGAATTTAATAAAAAATATAAGAGACAAGCTTCAAGAA TTAGGTTTTAAAAAGGTATTATTAGACATAACAGGATATATGAAAACAAAACTCACATATAACATAGATAATAACATATA CTTCTATAAATTACCATATAACATAGATTTAAAAAGAACTTATGAAAATATAATTGAAAATACAAAACTAGGAGAAGAAA GTAAATTAAATTCAAAAACCATAAACTATGAGGATATAACTATTGAAGATAATGGTAAAATAAGTATGCCTGAAACTAAT GACTTTATTGATAAATTCAATAAAATTCTACCTTCAATTGAAAGAAAAATATAG
Upstream 100 bases:
>100_bases ACGTTACTTAACTATATTAATAAAAATAAAATAGATATAAAACACGATGATGCAAAAAAGGTTATACAATACATTAAAAA AATAAGTAAACAATGATAAT
Downstream 100 bases:
>100_bases AATATAATCTACTATATTCTTCTTTTAATAAAATAATAATTTAAATTATTGAATCATAGCACGCATTAAATCACTTGATC TTACAAGACCAATTGGTTCA
Product: ATP-utilizing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 337; Mature: 337
Protein sequence:
>337_residues MKIEEKIEKLKEYLKDKKSILAFSAGSDSTLIAYILSQVSPNSVLVTIDNNMMPKDFINYTKEKAKELNLKHDVINVNFL KNPEFISNNQKRCYNCRKIMYLKIQELSYFNEYDYFLEGTNLTDLLEDRPGILVRKTYNMTSPLIECGITKNDVFNMIKY LNLTYSHNTTCLATRVKTNEEVSMEKFKLIDEAETYLKKYIKQENIRVRFDSYTATISIDEPLEVLDKNLIKNIRDKLQE LGFKKVLLDITGYMKTKLTYNIDNNIYFYKLPYNIDLKRTYENIIENTKLGEESKLNSKTINYEDITIEDNGKISMPETN DFIDKFNKILPSIERKI
Sequences:
>Translated_337_residues MKIEEKIEKLKEYLKDKKSILAFSAGSDSTLIAYILSQVSPNSVLVTIDNNMMPKDFINYTKEKAKELNLKHDVINVNFL KNPEFISNNQKRCYNCRKIMYLKIQELSYFNEYDYFLEGTNLTDLLEDRPGILVRKTYNMTSPLIECGITKNDVFNMIKY LNLTYSHNTTCLATRVKTNEEVSMEKFKLIDEAETYLKKYIKQENIRVRFDSYTATISIDEPLEVLDKNLIKNIRDKLQE LGFKKVLLDITGYMKTKLTYNIDNNIYFYKLPYNIDLKRTYENIIENTKLGEESKLNSKTINYEDITIEDNGKISMPETN DFIDKFNKILPSIERKI >Mature_337_residues MKIEEKIEKLKEYLKDKKSILAFSAGSDSTLIAYILSQVSPNSVLVTIDNNMMPKDFINYTKEKAKELNLKHDVINVNFL KNPEFISNNQKRCYNCRKIMYLKIQELSYFNEYDYFLEGTNLTDLLEDRPGILVRKTYNMTSPLIECGITKNDVFNMIKY LNLTYSHNTTCLATRVKTNEEVSMEKFKLIDEAETYLKKYIKQENIRVRFDSYTATISIDEPLEVLDKNLIKNIRDKLQE LGFKKVLLDITGYMKTKLTYNIDNNIYFYKLPYNIDLKRTYENIIENTKLGEESKLNSKTINYEDITIEDNGKISMPETN DFIDKFNKILPSIERKI
Specific function: Unknown
COG id: COG1606
COG function: function code R; ATP-utilizing enzymes of the PP-loop superfamily
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To M.jannaschii MJ0830 [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005232 - InterPro: IPR022310 - InterPro: IPR014729 [H]
Pfam domain/function: PF02540 NAD_synthase [H]
EC number: NA
Molecular weight: Translated: 39656; Mature: 39656
Theoretical pI: Translated: 7.87; Mature: 7.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIEEKIEKLKEYLKDKKSILAFSAGSDSTLIAYILSQVSPNSVLVTIDNNMMPKDFINY CCHHHHHHHHHHHHHCHHHEEEEECCCCCHHHHHHHHHCCCCEEEEEECCCCCCHHHHHH TKEKAKELNLKHDVINVNFLKNPEFISNNQKRCYNCRKIMYLKIQELSYFNEYDYFLEGT HHHHHHHCCCCEEEEEEEEECCCHHHCCCHHHHHHCCEEEEEEEHHHHHCCCCCEEEECC NLTDLLEDRPGILVRKTYNMTSPLIECGITKNDVFNMIKYLNLTYSHNTTCLATRVKTNE CHHHHHHCCCCEEEEEECCCCCHHHHCCCCHHHHHHHHHHHEEEECCCCEEEEEEECCCC EVSMEKFKLIDEAETYLKKYIKQENIRVRFDSYTATISIDEPLEVLDKNLIKNIRDKLQE CHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECEEEEEEECCCHHHHHHHHHHHHHHHHHH LGFKKVLLDITGYMKTKLTYNIDNNIYFYKLPYNIDLKRTYENIIENTKLGEESKLNSKT CCHHHHHHHHHCCEEEEEEEEECCCEEEEECCCCCCHHHHHHHHHHCCCCCCCCCCCCCC INYEDITIEDNGKISMPETNDFIDKFNKILPSIERKI CCEEEEEEECCCEEECCCCHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MKIEEKIEKLKEYLKDKKSILAFSAGSDSTLIAYILSQVSPNSVLVTIDNNMMPKDFINY CCHHHHHHHHHHHHHCHHHEEEEECCCCCHHHHHHHHHCCCCEEEEEECCCCCCHHHHHH TKEKAKELNLKHDVINVNFLKNPEFISNNQKRCYNCRKIMYLKIQELSYFNEYDYFLEGT HHHHHHHCCCCEEEEEEEEECCCHHHCCCHHHHHHCCEEEEEEEHHHHHCCCCCEEEECC NLTDLLEDRPGILVRKTYNMTSPLIECGITKNDVFNMIKYLNLTYSHNTTCLATRVKTNE CHHHHHHCCCCEEEEEECCCCCHHHHCCCCHHHHHHHHHHHEEEECCCCEEEEEEECCCC EVSMEKFKLIDEAETYLKKYIKQENIRVRFDSYTATISIDEPLEVLDKNLIKNIRDKLQE CHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECEEEEEEECCCHHHHHHHHHHHHHHHHHH LGFKKVLLDITGYMKTKLTYNIDNNIYFYKLPYNIDLKRTYENIIENTKLGEESKLNSKT CCHHHHHHHHHCCEEEEEEEEECCCEEEEECCCCCCHHHHHHHHHHCCCCCCCCCCCCCC INYEDITIEDNGKISMPETNDFIDKFNKILPSIERKI CCEEEEEEECCCEEECCCCHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8905231 [H]