| Definition | Methanosphaera stadtmanae DSM 3091 chromosome, complete genome. |
|---|---|
| Accession | NC_007681 |
| Length | 1,767,403 |
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The map label for this gene is hisA [C]
Identifier: 84490045
GI number: 84490045
Start: 1422756
End: 1423475
Strand: Direct
Name: hisA [C]
Synonym: Msp_1257
Alternate gene names: 84490045
Gene position: 1422756-1423475 (Clockwise)
Preceding gene: 84490044
Following gene: 84490046
Centisome position: 80.5
GC content: 22.92
Gene sequence:
>720_bases TTGATTTTTATGATTATTCCTGTAATTGACATTATGCACAATGAATGTGTTAGTGGAAAATCTGGTAGACGAAGTACTTA TAAAAAATTAAGAAGTATTTATGGTGATAATCCATTAGATATTGCAACTGCTCTAAAAGAAGATGGTGCTCAACTAATAT ATATTGCTGATTTAGATAAAATTGAAAGGATAGATGATAATAACAATATAATATCTTCTATAAATAATATTATTCCTGTA ATGTTAGATAATGGTATTTCATCTATTGAAGATATTGAAAATAATAAAAATATATGTAGTTACAATATATTAGCTACTGA AACTATGACAAGTCTTGACAACATAGAAGAAATATTTAAAAAGTATGATAGTAATAAGCTAGTTGTTAGTATAGATATTA AAAATAATGAGCTTCTTGTTAATAATAAGGATATTGATCTTGAGGATGTAATTTATTTAATTAATAAGTATAAACCAAAA TATACTATAATTCTTAATATTTCATATGTTGGAACTAAAAAAGGTGTAAATACTAATATAATAGAAGAAATTACTAAAAA AATACCCCACACAAAATGTTGTATAGCAGGTGGTATTAGAAATAGTGATATTGAAACATACACTAAAAAAAATATTAACA ACTTCCTTATTGGAACATTACTTCATGAAGGTAATCTTAGTTATAAATTATATATGGAAAGTAAAAAAAATGAAAAATAA
Upstream 100 bases:
>100_bases AGATAGTGATATGAAACTACCTGAAAATTTAGCAAATAGTGCTATTGATGTGGCCCTAGAAGCAGTTGATGAATATGTTG AAAATAGAAACAATTAAGTT
Downstream 100 bases:
>100_bases AATACTTACTATAGGTCCAATTACAAAAGATATTATAAAAACACCAACACAAACATATATTCAAACAGGCGGTGCATCAT ATTATCAGATGTGGACATTA
Product: hypothetical protein
Products: 5-[(5-phospho-1-deoxyribulos-1-ylamino)methylideneamino]-1-(5-; $phosphoribosyl)imidazole-4-carboxamide
Alternate protein names: NA
Number of amino acids: Translated: 239; Mature: 239
Protein sequence:
>239_residues MIFMIIPVIDIMHNECVSGKSGRRSTYKKLRSIYGDNPLDIATALKEDGAQLIYIADLDKIERIDDNNNIISSINNIIPV MLDNGISSIEDIENNKNICSYNILATETMTSLDNIEEIFKKYDSNKLVVSIDIKNNELLVNNKDIDLEDVIYLINKYKPK YTIILNISYVGTKKGVNTNIIEEITKKIPHTKCCIAGGIRNSDIETYTKKNINNFLIGTLLHEGNLSYKLYMESKKNEK
Sequences:
>Translated_239_residues MIFMIIPVIDIMHNECVSGKSGRRSTYKKLRSIYGDNPLDIATALKEDGAQLIYIADLDKIERIDDNNNIISSINNIIPV MLDNGISSIEDIENNKNICSYNILATETMTSLDNIEEIFKKYDSNKLVVSIDIKNNELLVNNKDIDLEDVIYLINKYKPK YTIILNISYVGTKKGVNTNIIEEITKKIPHTKCCIAGGIRNSDIETYTKKNINNFLIGTLLHEGNLSYKLYMESKKNEK >Mature_239_residues MIFMIIPVIDIMHNECVSGKSGRRSTYKKLRSIYGDNPLDIATALKEDGAQLIYIADLDKIERIDDNNNIISSINNIIPV MLDNGISSIEDIENNKNICSYNILATETMTSLDNIEEIFKKYDSNKLVVSIDIKNNELLVNNKDIDLEDVIYLINKYKPK YTIILNISYVGTKKGVNTNIIEEITKKIPHTKCCIAGGIRNSDIETYTKKNINNFLIGTLLHEGNLSYKLYMESKKNEK
Specific function: Histidine biosynthesis; fourth step. [C]
COG id: COG1411
COG function: function code R; Uncharacterized protein related to proFAR isomerase (HisA)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the hisA/hisF family [H]
Homologues:
Organism=Escherichia coli, GI87082028, Length=253, Percent_Identity=24.5059288537549, Blast_Score=76, Evalue=2e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR006062 - InterPro: IPR004650 - InterPro: IPR011060 [H]
Pfam domain/function: PF00977 His_biosynth [H]
EC number: 5.3.1.16
Molecular weight: Translated: 27176; Mature: 27176
Theoretical pI: Translated: 5.81; Mature: 5.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIFMIIPVIDIMHNECVSGKSGRRSTYKKLRSIYGDNPLDIATALKEDGAQLIYIADLDK CEEEEEEHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHCCCCEEEEEECCHH IERIDDNNNIISSINNIIPVMLDNGISSIEDIENNKNICSYNILATETMTSLDNIEEIFK HHHCCCCCHHHHHHHHHEEEEECCCCHHHHHHCCCCCEEEEEEEEHHHHHHHHHHHHHHH KYDSNKLVVSIDIKNNELLVNNKDIDLEDVIYLINKYKPKYTIILNISYVGTKKGVNTNI HCCCCEEEEEEEECCCEEEEECCCCCHHHHHHHHHCCCCCEEEEEEEEEECCCCCCCHHH IEEITKKIPHTKCCIAGGIRNSDIETYTKKNINNFLIGTLLHEGNLSYKLYMESKKNEK HHHHHHHCCCCEEEEECCCCCCCCHHHHHHCCCHHEEEEEEECCCCEEEEEEECCCCCC >Mature Secondary Structure MIFMIIPVIDIMHNECVSGKSGRRSTYKKLRSIYGDNPLDIATALKEDGAQLIYIADLDK CEEEEEEHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHCCCCEEEEEECCHH IERIDDNNNIISSINNIIPVMLDNGISSIEDIENNKNICSYNILATETMTSLDNIEEIFK HHHCCCCCHHHHHHHHHEEEEECCCCHHHHHHCCCCCEEEEEEEEHHHHHHHHHHHHHHH KYDSNKLVVSIDIKNNELLVNNKDIDLEDVIYLINKYKPKYTIILNISYVGTKKGVNTNI HCCCCEEEEEEEECCCEEEEECCCCCHHHHHHHHHCCCCCEEEEEEEEEECCCCCCCHHH IEEITKKIPHTKCCIAGGIRNSDIETYTKKNINNFLIGTLLHEGNLSYKLYMESKKNEK HHHHHHHCCCCEEEEECCCCCCCCHHHHHHCCCHHEEEEEEECCCCEEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: 1-(5-phosphoribosyl)-5-[(5-; $phosphoribosylamino)methylideneamino]imidazole-4-carboxamide
Specific reaction: 1-(5-phosphoribosyl)-5-[(5- $phosphoribosylamino)methylideneamino]imidazole-4-carboxamide = 5- $[(5-phospho-1-deoxyribulos-1-ylamino)methylideneamino]-1-(5- $phosphoribosyl)imidazole-4-carboxamide
General reaction: Isomerases; Intramolecular Oxidoreductases; Interconverting Aldoses and Ketoses [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]