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The map label for this gene is pfdB [H]

Identifier: 84490044

GI number: 84490044

Start: 1422014

End: 1422355

Strand: Direct

Name: pfdB [H]

Synonym: Msp_1256

Alternate gene names: 84490044

Gene position: 1422014-1422355 (Clockwise)

Preceding gene: 84490043

Following gene: 84490045

Centisome position: 80.46

GC content: 27.49

Gene sequence:

>342_bases
ATGCCACAAAATATTCAAGAACAATTAAATCAATTCCAACAAGTACAACAACAAGCTCAATCAATTGCTATGCAAAAACA
AACATTAACTTTACAAATTAATGAGTCTAAAAAAGCTTTAGATGAATTATCAAAAACAGCAGATGATCAAGATGTTTATA
AAACAGCTGGACCACTACTTATAAAAACAACAAAAACTGATTCTGAAGCAGACTTAAAAGATAGTATTGAAATGCTTGAA
ATTAGACAAAAAACTATTGAAAAACAAGAAAAACGTATAACTGGTAAACTTGAAGAATTACAAAAAAATCTTCAAGAAGC
TATGAGTCAAATGAAACAATAG

Upstream 100 bases:

>100_bases
AAGGAACATAAAAGATATATTATATTATTATTCATTCACATAGAATATAAAATTAGATTTATTTAATATAAAGAAAAAAA
TTTAGGTGATATAGATGGAT

Downstream 100 bases:

>100_bases
ATTATAAATTCTTTTTATAAATCTATTTTTTTTATTATCCCCTCCTATTAATATAATGATAAAAATAATATTTTTATGTA
AAATATATTTTAACTGATTT

Product: hypothetical protein

Products: NA

Alternate protein names: GimC subunit beta [H]

Number of amino acids: Translated: 113; Mature: 112

Protein sequence:

>113_residues
MPQNIQEQLNQFQQVQQQAQSIAMQKQTLTLQINESKKALDELSKTADDQDVYKTAGPLLIKTTKTDSEADLKDSIEMLE
IRQKTIEKQEKRITGKLEELQKNLQEAMSQMKQ

Sequences:

>Translated_113_residues
MPQNIQEQLNQFQQVQQQAQSIAMQKQTLTLQINESKKALDELSKTADDQDVYKTAGPLLIKTTKTDSEADLKDSIEMLE
IRQKTIEKQEKRITGKLEELQKNLQEAMSQMKQ
>Mature_112_residues
PQNIQEQLNQFQQVQQQAQSIAMQKQTLTLQINESKKALDELSKTADDQDVYKTAGPLLIKTTKTDSEADLKDSIEMLEI
RQKTIEKQEKRITGKLEELQKNLQEAMSQMKQ

Specific function: Molecular chaperone capable of stabilizing a range of proteins. Seems to fulfill an ATP-independent, HSP70-like function in archaeal de novo protein folding [H]

COG id: COG1382

COG function: function code O; Prefoldin, chaperonin cofactor

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the prefoldin subunit beta family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012713
- InterPro:   IPR002777
- InterPro:   IPR009053 [H]

Pfam domain/function: PF01920 Prefoldin_2 [H]

EC number: NA

Molecular weight: Translated: 13036; Mature: 12905

Theoretical pI: Translated: 4.94; Mature: 4.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPQNIQEQLNQFQQVQQQAQSIAMQKQTLTLQINESKKALDELSKTADDQDVYKTAGPLL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCHHHHHHHHHHCCCHHHHHHHCCCEE
IKTTKTDSEADLKDSIEMLEIRQKTIEKQEKRITGKLEELQKNLQEAMSQMKQ
EEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
PQNIQEQLNQFQQVQQQAQSIAMQKQTLTLQINESKKALDELSKTADDQDVYKTAGPLL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCHHHHHHHHHHCCCHHHHHHHCCCEE
IKTTKTDSEADLKDSIEMLEIRQKTIEKQEKRITGKLEELQKNLQEAMSQMKQ
EEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9371463; 10581246; 11106732 [H]