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The map label for this gene is trkA2

Identifier: 84490012

GI number: 84490012

Start: 1391751

End: 1392413

Strand: Direct

Name: trkA2

Synonym: Msp_1223

Alternate gene names: 84490012

Gene position: 1391751-1392413 (Clockwise)

Preceding gene: 84490011

Following gene: 84490013

Centisome position: 78.75

GC content: 28.05

Gene sequence:

>663_bases
ATGGGTATAATTGTAGGTGCTGGACGTATAGGTTATAATTTAGCAAGAAATATGGCTGAAAAACATGATATAACACTTAT
TGATAAAGATAAGGAACTATGTGAAAAAACAAATTATCTACTTGATTGTTATGTTATTCATGGAACTGGTACAAATACTA
AAATTCTTGAAGATGCTGATATAGCAAAAGCAGACTTTTTTGTTGCAACAACAGGAAATGATGAAGTAAATCTTTTATCA
TCAGTATATGCTAAAGAACATGGTGTTAATATAATTATATCAAGATTAAATAACACAGAACATGCTGAAATATTCACTAA
ATTTAATATACCCTTTATTAATCCTGAAACTAGTGCTATGAGACTTATTGCAAGAAGTATTGTACGACCAACTGCACAAT
CACTAGTATCATTAGGACAAGGAAATGCTGAAATTTTAGAATTAAAAGTTAAAAATAAAGATCTTGCATTCATACCCATC
TCTGAAATTGAAAATAACACAGATAAATTTATCATAGTTATGGTGTATACAGATAATGAAACTATTATTCCAACCAAAGA
AACAATGCTTGGATATGATGATAGTGTAGCAGTACTTGTAAAAACTGAATATGTAAATGAAATACAAGACTTATTTACTA
AAAATACATCAGAACTTGAATAA

Upstream 100 bases:

>100_bases
AAATCTTATTTTATAAAACAAACTTTTAATTAAAACAGCATACTATAATATATACATACAAAAAAAAATTTTAATGAAAA
AAGAATAGATGATTAAATTG

Downstream 100 bases:

>100_bases
TATAACTATATTGGGGTTTGAAAATGATTAATCCTAAAATAATTACATTATCTAACTTCTTAAGAAAAGAAGGAATGATT
GTAAGTATACGCAGTACAAT

Product: TrkA2

Products: NA

Alternate protein names: K(+)-uptake protein trkA homolog [H]

Number of amino acids: Translated: 220; Mature: 219

Protein sequence:

>220_residues
MGIIVGAGRIGYNLARNMAEKHDITLIDKDKELCEKTNYLLDCYVIHGTGTNTKILEDADIAKADFFVATTGNDEVNLLS
SVYAKEHGVNIIISRLNNTEHAEIFTKFNIPFINPETSAMRLIARSIVRPTAQSLVSLGQGNAEILELKVKNKDLAFIPI
SEIENNTDKFIIVMVYTDNETIIPTKETMLGYDDSVAVLVKTEYVNEIQDLFTKNTSELE

Sequences:

>Translated_220_residues
MGIIVGAGRIGYNLARNMAEKHDITLIDKDKELCEKTNYLLDCYVIHGTGTNTKILEDADIAKADFFVATTGNDEVNLLS
SVYAKEHGVNIIISRLNNTEHAEIFTKFNIPFINPETSAMRLIARSIVRPTAQSLVSLGQGNAEILELKVKNKDLAFIPI
SEIENNTDKFIIVMVYTDNETIIPTKETMLGYDDSVAVLVKTEYVNEIQDLFTKNTSELE
>Mature_219_residues
GIIVGAGRIGYNLARNMAEKHDITLIDKDKELCEKTNYLLDCYVIHGTGTNTKILEDADIAKADFFVATTGNDEVNLLSS
VYAKEHGVNIIISRLNNTEHAEIFTKFNIPFINPETSAMRLIARSIVRPTAQSLVSLGQGNAEILELKVKNKDLAFIPIS
EIENNTDKFIIVMVYTDNETIIPTKETMLGYDDSVAVLVKTEYVNEIQDLFTKNTSELE

Specific function: Part of a potassium transport system [H]

COG id: COG0569

COG function: function code P; K+ transport systems, NAD-binding component

Gene ontology:

Cell location: Peripherally Bound To The Inner Side Of The Inner Membrane Via The Trkg And Trkh Proteins [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 RCK N-terminal domain [H]

Homologues:

Organism=Escherichia coli, GI1789685, Length=157, Percent_Identity=29.2993630573248, Blast_Score=62, Evalue=4e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006036
- InterPro:   IPR016040
- InterPro:   IPR006037
- InterPro:   IPR003148 [H]

Pfam domain/function: PF02080 TrkA_C; PF02254 TrkA_N [H]

EC number: NA

Molecular weight: Translated: 24548; Mature: 24417

Theoretical pI: Translated: 4.52; Mature: 4.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGIIVGAGRIGYNLARNMAEKHDITLIDKDKELCEKTNYLLDCYVIHGTGTNTKILEDAD
CEEEEECCHHHHHHHHHHHHHCCEEEEECCHHHHHHCCEEEEEEEEEECCCCCEEEECCC
IAKADFFVATTGNDEVNLLSSVYAKEHGVNIIISRLNNTEHAEIFTKFNIPFINPETSAM
CCCEEEEEEECCCCCHHHHHHHHHHHCCCEEEEEECCCCCCEEEEEEECCEEECCCHHHH
RLIARSIVRPTAQSLVSLGQGNAEILELKVKNKDLAFIPISEIENNTDKFIIVMVYTDNE
HHHHHHHHCHHHHHHHHHCCCCEEEEEEEECCCCEEEEEHHHCCCCCCCEEEEEEEECCC
TIIPTKETMLGYDDSVAVLVKTEYVNEIQDLFTKNTSELE
EEECCHHHHCCCCCCEEEEEEHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
GIIVGAGRIGYNLARNMAEKHDITLIDKDKELCEKTNYLLDCYVIHGTGTNTKILEDAD
EEEEECCHHHHHHHHHHHHHCCEEEEECCHHHHHHCCEEEEEEEEEECCCCCEEEECCC
IAKADFFVATTGNDEVNLLSSVYAKEHGVNIIISRLNNTEHAEIFTKFNIPFINPETSAM
CCCEEEEEEECCCCCHHHHHHHHHHHCCCEEEEEECCCCCCEEEEEEECCEEECCCHHHH
RLIARSIVRPTAQSLVSLGQGNAEILELKVKNKDLAFIPISEIENNTDKFIIVMVYTDNE
HHHHHHHHCHHHHHHHHHCCCCEEEEEEEECCCCEEEEEHHHCCCCCCCEEEEEEEECCC
TIIPTKETMLGYDDSVAVLVKTEYVNEIQDLFTKNTSELE
EEECCHHHHCCCCCCEEEEEEHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9371463 [H]