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The map label for this gene is 84489955

Identifier: 84489955

GI number: 84489955

Start: 1333299

End: 1334132

Strand: Direct

Name: 84489955

Synonym: Msp_1163

Alternate gene names: NA

Gene position: 1333299-1334132 (Clockwise)

Preceding gene: 84489954

Following gene: 84489957

Centisome position: 75.44

GC content: 22.42

Gene sequence:

>834_bases
ATGAGAGAATTTATAGAATATGTGGGATTTAAAACAATAAAACTTTATTTACATATAACTAAGAAAAAGAAAATTGAAAA
TAAAATTCAAAGAGATGTTGATGAGAAAGTAACTACCAAGTTACTAAAAGATAAACAATATAATCTACCTATTAAAAAGA
TAATTTTTTTAATATGTATTGGAGTTATTCTATGTATTTTCAATATAACATATGCCATTGAAGTATTTATGATAACACTT
CTTTATATTTTATTTAAAAGAAATCTACCCAAATATAAAAAAGAAAAAAAGAGAAAAGATATTTTAAAAGTTATACCCTA
TGTTTTAAGAGAATTATCAATAGAATTAAAGGCAGGTATTGGATTATTTGATGCTATTGAAGAAGTTAGTAATGGTAATT
ATGGTCAGTTATCTAAGGAATTTAAAATAACATTGAATGAAATAAAATATGGTACTAATTATATTGAAGCTTTTGAAAAT
TTATCAAAACGTATTAATTTACCTATTATGGAAAAAATAGTTAGTCATATGAATAGAACAATAATTAATGGTGGTAATCT
TGCAGATACTTTGAATATTTTAGCTAATGAAAATTCACGTAATATGCAAATTAAATATAAGGAATATTCTGAAAAATTAA
ATTCATTGATGATACTGTATATGTTTACTACTGTAGTTATACCTGTAATTTTATTTATCATGATAATTGCAGCTACAACT
GTTATAGGTCCCATAGTTAAGGCAGAAATATTGTTAGTGTTATATTTGTTTTTCTTTCCCATTATAATAGTATTCTTCAT
TATAATTATAAAAAGACTTGAACCAACTTTATAG

Upstream 100 bases:

>100_bases
AAATACATGAAAGAGAAAAATATTTAGAAAAATATCATGATAAAAACATGAATATAGAAAAAGTACATGAAATTATAAAT
AATTACCATCAAAAGACATT

Downstream 100 bases:

>100_bases
AAAAAAAGATAAATATCAGAGTTTACACAAGTAAACTCTTATTTTTTTAATTATTTAAGCAGTGTAGAATAATTTATCAT
CACTGATTGTGTTATTTATT

Product: type II secretion protein F

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 277; Mature: 277

Protein sequence:

>277_residues
MREFIEYVGFKTIKLYLHITKKKKIENKIQRDVDEKVTTKLLKDKQYNLPIKKIIFLICIGVILCIFNITYAIEVFMITL
LYILFKRNLPKYKKEKKRKDILKVIPYVLRELSIELKAGIGLFDAIEEVSNGNYGQLSKEFKITLNEIKYGTNYIEAFEN
LSKRINLPIMEKIVSHMNRTIINGGNLADTLNILANENSRNMQIKYKEYSEKLNSLMILYMFTTVVIPVILFIMIIAATT
VIGPIVKAEILLVLYLFFFPIIIVFFIIIIKRLEPTL

Sequences:

>Translated_277_residues
MREFIEYVGFKTIKLYLHITKKKKIENKIQRDVDEKVTTKLLKDKQYNLPIKKIIFLICIGVILCIFNITYAIEVFMITL
LYILFKRNLPKYKKEKKRKDILKVIPYVLRELSIELKAGIGLFDAIEEVSNGNYGQLSKEFKITLNEIKYGTNYIEAFEN
LSKRINLPIMEKIVSHMNRTIINGGNLADTLNILANENSRNMQIKYKEYSEKLNSLMILYMFTTVVIPVILFIMIIAATT
VIGPIVKAEILLVLYLFFFPIIIVFFIIIIKRLEPTL
>Mature_277_residues
MREFIEYVGFKTIKLYLHITKKKKIENKIQRDVDEKVTTKLLKDKQYNLPIKKIIFLICIGVILCIFNITYAIEVFMITL
LYILFKRNLPKYKKEKKRKDILKVIPYVLRELSIELKAGIGLFDAIEEVSNGNYGQLSKEFKITLNEIKYGTNYIEAFEN
LSKRINLPIMEKIVSHMNRTIINGGNLADTLNILANENSRNMQIKYKEYSEKLNSLMILYMFTTVVIPVILFIMIIAATT
VIGPIVKAEILLVLYLFFFPIIIVFFIIIIKRLEPTL

Specific function: Unknown

COG id: COG2064

COG function: function code NU; Flp pilus assembly protein TadC

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32374; Mature: 32374

Theoretical pI: Translated: 10.08; Mature: 10.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MREFIEYVGFKTIKLYLHITKKKKIENKIQRDVDEKVTTKLLKDKQYNLPIKKIIFLICI
CHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH
GVILCIFNITYAIEVFMITLLYILFKRNLPKYKKEKKRKDILKVIPYVLRELSIELKAGI
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
GLFDAIEEVSNGNYGQLSKEFKITLNEIKYGTNYIEAFENLSKRINLPIMEKIVSHMNRT
CHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
IINGGNLADTLNILANENSRNMQIKYKEYSEKLNSLMILYMFTTVVIPVILFIMIIAATT
HCCCCCHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VIGPIVKAEILLVLYLFFFPIIIVFFIIIIKRLEPTL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MREFIEYVGFKTIKLYLHITKKKKIENKIQRDVDEKVTTKLLKDKQYNLPIKKIIFLICI
CHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH
GVILCIFNITYAIEVFMITLLYILFKRNLPKYKKEKKRKDILKVIPYVLRELSIELKAGI
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
GLFDAIEEVSNGNYGQLSKEFKITLNEIKYGTNYIEAFENLSKRINLPIMEKIVSHMNRT
CHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
IINGGNLADTLNILANENSRNMQIKYKEYSEKLNSLMILYMFTTVVIPVILFIMIIAATT
HCCCCCHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VIGPIVKAEILLVLYLFFFPIIIVFFIIIIKRLEPTL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA