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The map label for this gene is 84489946

Identifier: 84489946

GI number: 84489946

Start: 1326069

End: 1326692

Strand: Direct

Name: 84489946

Synonym: Msp_1154

Alternate gene names: NA

Gene position: 1326069-1326692 (Clockwise)

Preceding gene: 84489942

Following gene: 84489947

Centisome position: 75.03

GC content: 27.72

Gene sequence:

>624_bases
ATGCTTCAATTTTCAAAAACAGAAACTAAAGATTTGAGTATAGCTATTATAGTAATAACATTATTATTTGCATATTTATA
CAGTAATGGTACATTTGGAATGATGATATATTTGATTCCTATTTCACTAGTTACTATTGGACTTAGTTTTATATTACATG
AACTTGGACATAAATATGTAGCACAAAAATATGGATTTTTTGCTGAATTTAGAAAATGGAATACAGGACTACTCATAGCA
ATAATAACAGGTTTATTTGGATTTATATTCCTAGCACCTGGTGCAGTATATATTGGTTCATATACAGGAATAATTACAGA
TGAAGAAAATGGAAAAATTTCAATAGCAGGACCAATAGTAAATATAATTCTTGCAGTGATATTCTTATTAATTGAAATTA
GTTTAAAACCATTTTTCTTATTATCATCACCCCTATCCACATATTTAATGATAACAGCAATGATAGGATTCCATATTAAC
AGTTTCCTTGCATTATTTAACTTATTACCTATACCTATGTTAGATGGTTCTAAAGTTATGAAATGGAATCTTCCATTATG
GATTGTAAGTATAGTGGTTGCAGGCCTATTAACATATGCTTCCTACTCATCCATATTATTATAG

Upstream 100 bases:

>100_bases
TTTTTTTACTATATCATATTATATATTAGAAACATTATATAAAGTAGAATAATAAATAATTATAATACTAATATAAAATA
AAAACAGTTGGAGGATTAGA

Downstream 100 bases:

>100_bases
TAACCTAAAAAAATAGTTTTTACTATAAACTATACTTCTTATTTTTTTCAAGATATTAATTTCTAATTATCAACTACATG
ATTCCATTTAAATATATTTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 207; Mature: 207

Protein sequence:

>207_residues
MLQFSKTETKDLSIAIIVITLLFAYLYSNGTFGMMIYLIPISLVTIGLSFILHELGHKYVAQKYGFFAEFRKWNTGLLIA
IITGLFGFIFLAPGAVYIGSYTGIITDEENGKISIAGPIVNIILAVIFLLIEISLKPFFLLSSPLSTYLMITAMIGFHIN
SFLALFNLLPIPMLDGSKVMKWNLPLWIVSIVVAGLLTYASYSSILL

Sequences:

>Translated_207_residues
MLQFSKTETKDLSIAIIVITLLFAYLYSNGTFGMMIYLIPISLVTIGLSFILHELGHKYVAQKYGFFAEFRKWNTGLLIA
IITGLFGFIFLAPGAVYIGSYTGIITDEENGKISIAGPIVNIILAVIFLLIEISLKPFFLLSSPLSTYLMITAMIGFHIN
SFLALFNLLPIPMLDGSKVMKWNLPLWIVSIVVAGLLTYASYSSILL
>Mature_207_residues
MLQFSKTETKDLSIAIIVITLLFAYLYSNGTFGMMIYLIPISLVTIGLSFILHELGHKYVAQKYGFFAEFRKWNTGLLIA
IITGLFGFIFLAPGAVYIGSYTGIITDEENGKISIAGPIVNIILAVIFLLIEISLKPFFLLSSPLSTYLMITAMIGFHIN
SFLALFNLLPIPMLDGSKVMKWNLPLWIVSIVVAGLLTYASYSSILL

Specific function: Unknown

COG id: COG1994

COG function: function code R; Zn-dependent proteases

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M50B family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008915 [H]

Pfam domain/function: PF02163 Peptidase_M50 [H]

EC number: NA

Molecular weight: Translated: 22919; Mature: 22919

Theoretical pI: Translated: 8.71; Mature: 8.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLQFSKTETKDLSIAIIVITLLFAYLYSNGTFGMMIYLIPISLVTIGLSFILHELGHKYV
CCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AQKYGFFAEFRKWNTGLLIAIITGLFGFIFLAPGAVYIGSYTGIITDEENGKISIAGPIV
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCEEEECEEEEEEECCCCEEEEHHHHH
NIILAVIFLLIEISLKPFFLLSSPLSTYLMITAMIGFHINSFLALFNLLPIPMLDGSKVM
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEE
KWNLPLWIVSIVVAGLLTYASYSSILL
EECCHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MLQFSKTETKDLSIAIIVITLLFAYLYSNGTFGMMIYLIPISLVTIGLSFILHELGHKYV
CCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AQKYGFFAEFRKWNTGLLIAIITGLFGFIFLAPGAVYIGSYTGIITDEENGKISIAGPIV
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCEEEECEEEEEEECCCCEEEEHHHHH
NIILAVIFLLIEISLKPFFLLSSPLSTYLMITAMIGFHINSFLALFNLLPIPMLDGSKVM
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEE
KWNLPLWIVSIVVAGLLTYASYSSILL
EECCHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]