Click here to switch to the map view.

The map label for this gene is 84489899

Identifier: 84489899

GI number: 84489899

Start: 1258410

End: 1259111

Strand: Direct

Name: 84489899

Synonym: Msp_1105

Alternate gene names: NA

Gene position: 1258410-1259111 (Clockwise)

Preceding gene: 84489897

Following gene: 84489900

Centisome position: 71.2

GC content: 29.49

Gene sequence:

>702_bases
ATGTTAGAACAATTTTGGCAATATGGTATATTGGCTGCTGTTTTAATATTTGGTCTCAAAATTGGACTAGCTTTAGGATT
TTCAGGTATTGAAAAGAAAAAAGTTCTTTTAATATTAGTTGGTTATGGCGTAGCTTTAACTATATTTTCATATGTATTAA
CACCATATACACAACAAGTATATACCTTTGTATACCAATACACATCGGGAATTTTCGCTTGTATTGCAATTGTAATTCTT
ATTACTGGATTTAAAACAATATATGATTGGAAAGTAACTGGAAAAGATGTTGGTTCAGGTACTTGTATGGCTGTAGTTGC
ACCATGTCCTTGCTGTTTTGGAGCTATTTTAGCTTCCATCATGTTAGTAGCACCAATAGCTGGAGTTTCATCAATAACAT
TAGGTGTATTCTCTTCAGTAGCATTAGTGCTTGTTATGGGAATAACTTATTTCTTATCTATGCAAATTGTAAAAAGAATG
AAACAACCATACCCTATAGTTTTAGGTAATTTCATGATATTTATAGGATTATACTTTGTTTTATGTCTTATTATATTACC
AAACATGGCTTATATAACAACAGGAACATCAATTGAAATACAATCAATAGAAAATGTATCTTTAATGATTGTCAGTGTTT
TATGTTTACTTATTGCAGGTGGAATATTTGCTAGAAACAAAAGTTATTTCTTAGAAAAATAA

Upstream 100 bases:

>100_bases
GTATATAATTTCGAAATAATGTATGAAAAGATTATAATTTACTTGATAAAAATTCATACAATTTTGTTTATATAAATAAA
AAAAATAAGGAGGATATAAC

Downstream 100 bases:

>100_bases
AACAAGAGACAAAGTAGGAGGAAAAGAAATGTCAACAGCCATTCCTGGTGGAGAAATGTTATCAGGAGCATTAAATGTTA
TTGCACAAAGTTTATTACTT

Product: transporter

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 233; Mature: 233

Protein sequence:

>233_residues
MLEQFWQYGILAAVLIFGLKIGLALGFSGIEKKKVLLILVGYGVALTIFSYVLTPYTQQVYTFVYQYTSGIFACIAIVIL
ITGFKTIYDWKVTGKDVGSGTCMAVVAPCPCCFGAILASIMLVAPIAGVSSITLGVFSSVALVLVMGITYFLSMQIVKRM
KQPYPIVLGNFMIFIGLYFVLCLIILPNMAYITTGTSIEIQSIENVSLMIVSVLCLLIAGGIFARNKSYFLEK

Sequences:

>Translated_233_residues
MLEQFWQYGILAAVLIFGLKIGLALGFSGIEKKKVLLILVGYGVALTIFSYVLTPYTQQVYTFVYQYTSGIFACIAIVIL
ITGFKTIYDWKVTGKDVGSGTCMAVVAPCPCCFGAILASIMLVAPIAGVSSITLGVFSSVALVLVMGITYFLSMQIVKRM
KQPYPIVLGNFMIFIGLYFVLCLIILPNMAYITTGTSIEIQSIENVSLMIVSVLCLLIAGGIFARNKSYFLEK
>Mature_233_residues
MLEQFWQYGILAAVLIFGLKIGLALGFSGIEKKKVLLILVGYGVALTIFSYVLTPYTQQVYTFVYQYTSGIFACIAIVIL
ITGFKTIYDWKVTGKDVGSGTCMAVVAPCPCCFGAILASIMLVAPIAGVSSITLGVFSSVALVLVMGITYFLSMQIVKRM
KQPYPIVLGNFMIFIGLYFVLCLIILPNMAYITTGTSIEIQSIENVSLMIVSVLCLLIAGGIFARNKSYFLEK

Specific function: Unknown

COG id: COG4827

COG function: function code R; Predicted transporter

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25381; Mature: 25381

Theoretical pI: Translated: 8.80; Mature: 8.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.0 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
6.9 %Cys+Met (Translated Protein)
3.0 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
6.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLEQFWQYGILAAVLIFGLKIGLALGFSGIEKKKVLLILVGYGVALTIFSYVLTPYTQQV
CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHH
YTFVYQYTSGIFACIAIVILITGFKTIYDWKVTGKDVGSGTCMAVVAPCPCCFGAILASI
HHHHHHHHHHHHHHHHHHHHHHCCHHHEEEEECCCCCCCCCEEEEHHCCHHHHHHHHHHH
MLVAPIAGVSSITLGVFSSVALVLVMGITYFLSMQIVKRMKQPYPIVLGNFMIFIGLYFV
HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH
LCLIILPNMAYITTGTSIEIQSIENVSLMIVSVLCLLIAGGIFARNKSYFLEK
HHHHHHCCCCEEECCCEEEEECCCCHHHHHHHHHHHHHHCCHHHCCCHHCCCC
>Mature Secondary Structure
MLEQFWQYGILAAVLIFGLKIGLALGFSGIEKKKVLLILVGYGVALTIFSYVLTPYTQQV
CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHH
YTFVYQYTSGIFACIAIVILITGFKTIYDWKVTGKDVGSGTCMAVVAPCPCCFGAILASI
HHHHHHHHHHHHHHHHHHHHHHCCHHHEEEEECCCCCCCCCEEEEHHCCHHHHHHHHHHH
MLVAPIAGVSSITLGVFSSVALVLVMGITYFLSMQIVKRMKQPYPIVLGNFMIFIGLYFV
HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH
LCLIILPNMAYITTGTSIEIQSIENVSLMIVSVLCLLIAGGIFARNKSYFLEK
HHHHHHCCCCEEECCCEEEEECCCCHHHHHHHHHHHHHHCCHHHCCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA