| Definition | Methanosphaera stadtmanae DSM 3091 chromosome, complete genome. |
|---|---|
| Accession | NC_007681 |
| Length | 1,767,403 |
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The map label for this gene is ahcY
Identifier: 84489879
GI number: 84489879
Start: 1226950
End: 1228203
Strand: Direct
Name: ahcY
Synonym: Msp_1085
Alternate gene names: 84489879
Gene position: 1226950-1228203 (Clockwise)
Preceding gene: 84489878
Following gene: 84489883
Centisome position: 69.42
GC content: 33.33
Gene sequence:
>1254_bases ATGACATATGATATTAAGGATATTAATTTAGCTCCAGAAGGAGAAAAGAAAATAAAATGGGTACAAAAACATATGCCTGT TTTAGAAACTATTAAAAAACAATTTGAAGAAGAACAACCATTCAAAGGAATTACAATTGGTTCTTGTCTTCATCTTGAAC CTAAAACAATTAATTTAGGATTAACTCTACAAGCAGGTGGGGCAGAAGTTGTAATGACAGGTTGTAATCCATTATCTACC CAAGATGATGCTACAGCAGCTGGTGCAAAACTAGGATTAAATATGTATGGTTGGACTGGTGAAACTAATGAGGAATACTA TGAACAACTCAACAAAGTACTAGATTATGAACCAGATATTGTTATAGATGATGGTGCAGATTTAATATTTTTAATCCATA AAGAAAGACCCGAACTTCTTGAAAAACTAAGAGGAGGTTGTGAAGAAACAACAACAGGTATTCATAGATTAAAAGCAATG TATGAAGATAATGCTTTGAAAATGCCTATTATGGCTGTGAATGATTCATACATGAAATACCTCTTTGATAACAGATATGG TACTGGACAATCTACCTTTGATTCAATAATGGGAACAACAAACTCAGTAATTGCAGGACAAACTGTTGTTGTATGTGGTT ATGGATGGTGTGGAAGAGGTATTGCCATGAGAGCAGATGGACTTGGAGCAAATGTTATTGTTACAGAAGTTGATCCTATC AGAGCACTTGAAGCTAAAATGGATGGATACAGAGTAATGACAGTTCAAAAAGCACTTGAAGAAGCAGATATTGTTATAAC AGCTACTGGTAACAGAGATATCATATCTGGTGATGATTTTAAACATGTGAAAGATGGTTGTATGCTTGCAAATTCTGGAC ATTTCAATGTGGAAATTAATGAAAATGATCTTGCTAGCCAAGCAATAGGTAGAAATATGTTAAAACCAGATATTGAAGAA TTTGTAATGGCTGATGGACGTAGTATTTATTTACTAGCTGGTGGTAGATTAGTTAACCTTGCAGGACAATATGGACAGGG ACATCCAGCTGAAATTATGGATTTAAGTTTTGCTATGCAAGCATTATCTGCAAAACGTCTTTTAAATGAAGATATGAAAC CAGGTGTTTATAAAACAAGAGATGAAGTAGATATAGAAATAGCTAAATTAAAACTTAAAACAATGGGTGTGGAAATAGAT ACACTTAGTGATGAACAAGAAAAATATATGAATAGTTGGGATGTTGGTACATAA
Upstream 100 bases:
>100_bases TTAATAATTTAATACAACTTCCTTTATAATCTAAATTAATAATAAGAAATAAGAAGATATAATAATATATTGAATAATAT TTTAAAGAGAGATGAAATTA
Downstream 100 bases:
>100_bases ATATAACATCCTTCACTTTACTTTTTTTAAAACCAATCTTCAAGACTTGACTGTGCTGTTTTTGCTTGTAATTTTTTAAT TGCACTTATTGTTCGTCTTT
Product: S-adenosyl-L-homocysteine hydrolase
Products: NA
Alternate protein names: S-adenosyl-L-homocysteine hydrolase; AdoHcyase [H]
Number of amino acids: Translated: 417; Mature: 416
Protein sequence:
>417_residues MTYDIKDINLAPEGEKKIKWVQKHMPVLETIKKQFEEEQPFKGITIGSCLHLEPKTINLGLTLQAGGAEVVMTGCNPLST QDDATAAGAKLGLNMYGWTGETNEEYYEQLNKVLDYEPDIVIDDGADLIFLIHKERPELLEKLRGGCEETTTGIHRLKAM YEDNALKMPIMAVNDSYMKYLFDNRYGTGQSTFDSIMGTTNSVIAGQTVVVCGYGWCGRGIAMRADGLGANVIVTEVDPI RALEAKMDGYRVMTVQKALEEADIVITATGNRDIISGDDFKHVKDGCMLANSGHFNVEINENDLASQAIGRNMLKPDIEE FVMADGRSIYLLAGGRLVNLAGQYGQGHPAEIMDLSFAMQALSAKRLLNEDMKPGVYKTRDEVDIEIAKLKLKTMGVEID TLSDEQEKYMNSWDVGT
Sequences:
>Translated_417_residues MTYDIKDINLAPEGEKKIKWVQKHMPVLETIKKQFEEEQPFKGITIGSCLHLEPKTINLGLTLQAGGAEVVMTGCNPLST QDDATAAGAKLGLNMYGWTGETNEEYYEQLNKVLDYEPDIVIDDGADLIFLIHKERPELLEKLRGGCEETTTGIHRLKAM YEDNALKMPIMAVNDSYMKYLFDNRYGTGQSTFDSIMGTTNSVIAGQTVVVCGYGWCGRGIAMRADGLGANVIVTEVDPI RALEAKMDGYRVMTVQKALEEADIVITATGNRDIISGDDFKHVKDGCMLANSGHFNVEINENDLASQAIGRNMLKPDIEE FVMADGRSIYLLAGGRLVNLAGQYGQGHPAEIMDLSFAMQALSAKRLLNEDMKPGVYKTRDEVDIEIAKLKLKTMGVEID TLSDEQEKYMNSWDVGT >Mature_416_residues TYDIKDINLAPEGEKKIKWVQKHMPVLETIKKQFEEEQPFKGITIGSCLHLEPKTINLGLTLQAGGAEVVMTGCNPLSTQ DDATAAGAKLGLNMYGWTGETNEEYYEQLNKVLDYEPDIVIDDGADLIFLIHKERPELLEKLRGGCEETTTGIHRLKAMY EDNALKMPIMAVNDSYMKYLFDNRYGTGQSTFDSIMGTTNSVIAGQTVVVCGYGWCGRGIAMRADGLGANVIVTEVDPIR ALEAKMDGYRVMTVQKALEEADIVITATGNRDIISGDDFKHVKDGCMLANSGHFNVEINENDLASQAIGRNMLKPDIEEF VMADGRSIYLLAGGRLVNLAGQYGQGHPAEIMDLSFAMQALSAKRLLNEDMKPGVYKTRDEVDIEIAKLKLKTMGVEIDT LSDEQEKYMNSWDVGT
Specific function: May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine [H]
COG id: COG0499
COG function: function code H; S-adenosylhomocysteine hydrolase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the adenosylhomocysteinase family [H]
Homologues:
Organism=Homo sapiens, GI9951915, Length=415, Percent_Identity=40.7228915662651, Blast_Score=293, Evalue=1e-79, Organism=Homo sapiens, GI239937451, Length=391, Percent_Identity=41.4322250639386, Blast_Score=281, Evalue=8e-76, Organism=Homo sapiens, GI195539349, Length=414, Percent_Identity=33.8164251207729, Blast_Score=268, Evalue=7e-72, Organism=Homo sapiens, GI298286489, Length=414, Percent_Identity=33.8164251207729, Blast_Score=268, Evalue=7e-72, Organism=Homo sapiens, GI195539337, Length=414, Percent_Identity=33.8164251207729, Blast_Score=267, Evalue=2e-71, Organism=Homo sapiens, GI24308043, Length=414, Percent_Identity=33.8164251207729, Blast_Score=267, Evalue=2e-71, Organism=Homo sapiens, GI21361647, Length=414, Percent_Identity=33.0917874396135, Blast_Score=254, Evalue=8e-68, Organism=Caenorhabditis elegans, GI17506425, Length=417, Percent_Identity=41.0071942446043, Blast_Score=308, Evalue=2e-84, Organism=Saccharomyces cerevisiae, GI6320882, Length=429, Percent_Identity=39.6270396270396, Blast_Score=289, Evalue=6e-79, Organism=Drosophila melanogaster, GI24642172, Length=415, Percent_Identity=40.4819277108434, Blast_Score=293, Evalue=1e-79, Organism=Drosophila melanogaster, GI24656245, Length=405, Percent_Identity=36.0493827160494, Blast_Score=269, Evalue=3e-72, Organism=Drosophila melanogaster, GI45553387, Length=416, Percent_Identity=35.8173076923077, Blast_Score=259, Evalue=2e-69, Organism=Drosophila melanogaster, GI45553385, Length=416, Percent_Identity=35.8173076923077, Blast_Score=259, Evalue=2e-69,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000043 - InterPro: IPR015878 - InterPro: IPR020082 [H]
Pfam domain/function: PF05221 AdoHcyase; PF00670 AdoHcyase_NAD [H]
EC number: =3.3.1.1 [H]
Molecular weight: Translated: 46106; Mature: 45975
Theoretical pI: Translated: 4.50; Mature: 4.50
Prosite motif: PS00738 ADOHCYASE_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 4.8 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 4.6 %Met (Mature Protein) 6.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTYDIKDINLAPEGEKKIKWVQKHMPVLETIKKQFEEEQPFKGITIGSCLHLEPKTINLG CCEECEECCCCCCCHHHHHHHHHCCCHHHHHHHHHHHCCCCCCEEECCEEEECCCEEEEE LTLQAGGAEVVMTGCNPLSTQDDATAAGAKLGLNMYGWTGETNEEYYEQLNKVLDYEPDI EEEECCCCEEEEECCCCCCCCCCCHHCHHHHCCEEECCCCCCCHHHHHHHHHHHCCCCCE VIDDGADLIFLIHKERPELLEKLRGGCEETTTGIHRLKAMYEDNALKMPIMAVNDSYMKY EEECCCCEEEEEECCCHHHHHHHHCCCHHHHHHHHHHHHHHCCCCEECEEEEECHHHHHH LFDNRYGTGQSTFDSIMGTTNSVIAGQTVVVCGYGWCGRGIAMRADGLGANVIVTEVDPI HHCCCCCCCHHHHHHHHCCCCCEECCCEEEEECCCCCCCCEEEEECCCCCEEEEECCCCH RALEAKMDGYRVMTVQKALEEADIVITATGNRDIISGDDFKHVKDGCMLANSGHFNVEIN HHHHHHCCCEEEEHHHHHHCCCCEEEEECCCCCCCCCCCCHHHCCCEEEECCCEEEEEEC ENDLASQAIGRNMLKPDIEEFVMADGRSIYLLAGGRLVNLAGQYGQGHPAEIMDLSFAMQ CCHHHHHHHCCCCCCCCHHHHHHCCCCEEEEEECCEEEEECCCCCCCCCHHHHHHHHHHH ALSAKRLLNEDMKPGVYKTRDEVDIEIAKLKLKTMGVEIDTLSDEQEKYMNSWDVGT HHHHHHHHCCCCCCCCCCCCCCCEEEEEEEEEEHHCEEEECCCCHHHHHHCCCCCCC >Mature Secondary Structure TYDIKDINLAPEGEKKIKWVQKHMPVLETIKKQFEEEQPFKGITIGSCLHLEPKTINLG CEECEECCCCCCCHHHHHHHHHCCCHHHHHHHHHHHCCCCCCEEECCEEEECCCEEEEE LTLQAGGAEVVMTGCNPLSTQDDATAAGAKLGLNMYGWTGETNEEYYEQLNKVLDYEPDI EEEECCCCEEEEECCCCCCCCCCCHHCHHHHCCEEECCCCCCCHHHHHHHHHHHCCCCCE VIDDGADLIFLIHKERPELLEKLRGGCEETTTGIHRLKAMYEDNALKMPIMAVNDSYMKY EEECCCCEEEEEECCCHHHHHHHHCCCHHHHHHHHHHHHHHCCCCEECEEEEECHHHHHH LFDNRYGTGQSTFDSIMGTTNSVIAGQTVVVCGYGWCGRGIAMRADGLGANVIVTEVDPI HHCCCCCCCHHHHHHHHCCCCCEECCCEEEEECCCCCCCCEEEEECCCCCEEEEECCCCH RALEAKMDGYRVMTVQKALEEADIVITATGNRDIISGDDFKHVKDGCMLANSGHFNVEIN HHHHHHCCCEEEEHHHHHHCCCCEEEEECCCCCCCCCCCCHHHCCCEEEECCCEEEEEEC ENDLASQAIGRNMLKPDIEEFVMADGRSIYLLAGGRLVNLAGQYGQGHPAEIMDLSFAMQ CCHHHHHHHCCCCCCCCHHHHHHCCCCEEEEEECCEEEEECCCCCCCCCHHHHHHHHHHH ALSAKRLLNEDMKPGVYKTRDEVDIEIAKLKLKTMGVEIDTLSDEQEKYMNSWDVGT HHHHHHHHCCCCCCCCCCCCCCCEEEEEEEEEEHHCEEEECCCCHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9371463 [H]