| Definition | Methanosphaera stadtmanae DSM 3091 chromosome, complete genome. |
|---|---|
| Accession | NC_007681 |
| Length | 1,767,403 |
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The map label for this gene is 84489763
Identifier: 84489763
GI number: 84489763
Start: 1105518
End: 1107827
Strand: Direct
Name: 84489763
Synonym: Msp_0964
Alternate gene names: NA
Gene position: 1105518-1107827 (Clockwise)
Preceding gene: 84489756
Following gene: 84489764
Centisome position: 62.55
GC content: 25.71
Gene sequence:
>2310_bases ATGAATAAGAATATTTCATGTGTATTCTTATTAACTACTCTTATATTATTTTTAGGATTGTCAGTTGTTTGTGCTTCTGA TATTAATAGTTGTGCATATGATAGTGTATCTGATTTAGAAAAAGTAAATAATATTAAGGATAATACTGTCAATAAAGTTA CTGACAATAATGATAATAATATAAAAGAAATAAAAAAGAATACTAATAATAAAAAATTTACAGTATCTAATTTGGACAAT AAGAGAAAAGAAACTTCTAACTCTAAATTAGAGACTAATAATGTAGAAAATAATACTTTAAAAACTGTTAATAAGAAGAA TTTAAAATCTAGTGATTCATATACCATTACTAATGATTCTTTTAGTAATTATTTTAGTAATAAGAAATTAAATGACAATA TCCAAGATGGTTCTACTCTTGATTTTAAGGGTTTATTTAATGGTTCTAAGTATAGTATGACTATTAACAGACCTGTTAAT CTGATTTCATCTGATAAATCTGCATTTATTGATCTTGATGGTGGTGAATTTGTAATTGAAAAGACAAGTCATGTAAATGT TACTAATATTACATTCCATAATTCTCAAACATATGTTAGAGAATCTAGTAATATTACATTTAATAGACTTAATATACTAA TTGAAAATAAATCTATAGGTCAAGGTGTTGGTTCAACTTCTATTCGTGATGGTTCTACTAATATAACTATTAAAAATAGT AATTTTTATACTGAAAATAGTGGTGGATACAGTACTCTTGTTTTTGCTGGAGTAAATTGTAGTACTATTGAAAATAATAC TATTACAGCTGTTGGTGAAGTTGGTAATTTACTTTATTTAACTACATATAATACTAATGATTATGGTATTGGTATGAATT CATATAATATTATAAGAAATAATCGTATTACTGGTCCTAGTTCTGCATCAGGTATTTGTTATGCTGTTTGTTTAACTGGT CATGATAATTTAATACTAAATAATACTATTGTTTATCCAGGTTCAGGTATTACTATTCAATGGGGTTATACTGGTGCAAC TGTTGAAAATACATTCATTAATAACACTATTACTGGTAGTTTTCAAGCTTCAATAAACAGTACTGTTACTGGTAATAATA TAAGTGGTGGAGTTTCCTCTAAGGGCAATACTACGTTCACAAACAACACATTAGGTTCTATATCACTTGTTGGTAATGAT GTAGTTAATAATAATATCATTAATGGTTATGTAACTATAAGTAAAAGTAATAATACAGTAGATAATAATCTTATTAAAGG AGATATTAGTGCATCAGGTACTCCTACTTATAATACTATTACTAACAACAATTATACTGGAACAATTGATTCTAAATTAA CAAATCCTGCAAATAATAATGTGGTATCTGATAATAATCAAGTTAAATTTACTGAAATTATTGTAGAACCTAGTTCTGTA ACTGTTCCTATTAAAACAACAACAAGGCTTAGTTTATATGTTTTATCTGAGAATAATAAGGTACGAAGTGGAACATTAAT TATTAAGGGTGAAAATGGAAATATTATTGAAAGAGCTTCTCTTGATGATAAAGAAATTGTGGAGATTGATCTTTTATATG ATAGTATAGGAGTAAAAACTCTTAATATAACATATGAGGGAGTAGATAATTATCTTTCTTCTTCAAGATTATTCAATATA ATTGTAATTAAACAAGATCCATCAATAGAAGTAATTACTACTAAATCAAGAATTGATGATTTAACTACATTTAAGGCAAA GTTTAATGCTGAAAATGTACAGGGACGTGTTATATTTAAAGTAAATGGTAAAATATTAAAAGATGAAAATGGTAATATTA TATTTAGCACTGTTACAAATAATGAAGCTATAGTAGAAAATATTAAAGTAAATAGTAAATGGTATACTCCACATACAACA GTAACTGCTATTTATAGTGGAAATGATATGTATAATACTTCAACAAAAAGTGTACCATTTGAAGTTACACAACGTGAATC TAAAATTGAATTAGAAGCACAGCAAGCTACAATAGGTAAAACTGTAACATTAAAAGCAAAAATTACTGATGCTACTAATG AGAGTATTACAATAAATAATGGACAAGCCATATTTAAATTAAATGGAAGAACTCTAAAAGATACAAATGGAAACATAATT TATGCAAAAATTGTAAATGGAGAAGCTATACTTGATTATACCATACCACTTACATTTAAATCAGGCGAGTATAAACTTAC ATGTGTATTTGGTCATAAAATATATGAAAGAATGGATGGAAACACTACATTAACAATTGTAAAAGAATAA
Upstream 100 bases:
>100_bases TTTTTTACATATTATATGTTAACTAAGAAAATTCATTATTCTTAGAATTAGATATAAAAAAATCTTTAATAAGAAGTAAT ATAATGGAGGATTAAAAGAT
Downstream 100 bases:
>100_bases AAAAAAAAGTTAACATTCTTTTTCTACTTATTTTTTTTTAAAAATTTTATTATTATGAAAAATAATTAATTTTTAGTAAA ATTTGATAGTATAAAAATAA
Product: asn/thr-rich large protein family protein
Products: NA
Alternate protein names: Adhesin-Like Protein
Number of amino acids: Translated: 769; Mature: 769
Protein sequence:
>769_residues MNKNISCVFLLTTLILFLGLSVVCASDINSCAYDSVSDLEKVNNIKDNTVNKVTDNNDNNIKEIKKNTNNKKFTVSNLDN KRKETSNSKLETNNVENNTLKTVNKKNLKSSDSYTITNDSFSNYFSNKKLNDNIQDGSTLDFKGLFNGSKYSMTINRPVN LISSDKSAFIDLDGGEFVIEKTSHVNVTNITFHNSQTYVRESSNITFNRLNILIENKSIGQGVGSTSIRDGSTNITIKNS NFYTENSGGYSTLVFAGVNCSTIENNTITAVGEVGNLLYLTTYNTNDYGIGMNSYNIIRNNRITGPSSASGICYAVCLTG HDNLILNNTIVYPGSGITIQWGYTGATVENTFINNTITGSFQASINSTVTGNNISGGVSSKGNTTFTNNTLGSISLVGND VVNNNIINGYVTISKSNNTVDNNLIKGDISASGTPTYNTITNNNYTGTIDSKLTNPANNNVVSDNNQVKFTEIIVEPSSV TVPIKTTTRLSLYVLSENNKVRSGTLIIKGENGNIIERASLDDKEIVEIDLLYDSIGVKTLNITYEGVDNYLSSSRLFNI IVIKQDPSIEVITTKSRIDDLTTFKAKFNAENVQGRVIFKVNGKILKDENGNIIFSTVTNNEAIVENIKVNSKWYTPHTT VTAIYSGNDMYNTSTKSVPFEVTQRESKIELEAQQATIGKTVTLKAKITDATNESITINNGQAIFKLNGRTLKDTNGNII YAKIVNGEAILDYTIPLTFKSGEYKLTCVFGHKIYERMDGNTTLTIVKE
Sequences:
>Translated_769_residues MNKNISCVFLLTTLILFLGLSVVCASDINSCAYDSVSDLEKVNNIKDNTVNKVTDNNDNNIKEIKKNTNNKKFTVSNLDN KRKETSNSKLETNNVENNTLKTVNKKNLKSSDSYTITNDSFSNYFSNKKLNDNIQDGSTLDFKGLFNGSKYSMTINRPVN LISSDKSAFIDLDGGEFVIEKTSHVNVTNITFHNSQTYVRESSNITFNRLNILIENKSIGQGVGSTSIRDGSTNITIKNS NFYTENSGGYSTLVFAGVNCSTIENNTITAVGEVGNLLYLTTYNTNDYGIGMNSYNIIRNNRITGPSSASGICYAVCLTG HDNLILNNTIVYPGSGITIQWGYTGATVENTFINNTITGSFQASINSTVTGNNISGGVSSKGNTTFTNNTLGSISLVGND VVNNNIINGYVTISKSNNTVDNNLIKGDISASGTPTYNTITNNNYTGTIDSKLTNPANNNVVSDNNQVKFTEIIVEPSSV TVPIKTTTRLSLYVLSENNKVRSGTLIIKGENGNIIERASLDDKEIVEIDLLYDSIGVKTLNITYEGVDNYLSSSRLFNI IVIKQDPSIEVITTKSRIDDLTTFKAKFNAENVQGRVIFKVNGKILKDENGNIIFSTVTNNEAIVENIKVNSKWYTPHTT VTAIYSGNDMYNTSTKSVPFEVTQRESKIELEAQQATIGKTVTLKAKITDATNESITINNGQAIFKLNGRTLKDTNGNII YAKIVNGEAILDYTIPLTFKSGEYKLTCVFGHKIYERMDGNTTLTIVKE >Mature_769_residues MNKNISCVFLLTTLILFLGLSVVCASDINSCAYDSVSDLEKVNNIKDNTVNKVTDNNDNNIKEIKKNTNNKKFTVSNLDN KRKETSNSKLETNNVENNTLKTVNKKNLKSSDSYTITNDSFSNYFSNKKLNDNIQDGSTLDFKGLFNGSKYSMTINRPVN LISSDKSAFIDLDGGEFVIEKTSHVNVTNITFHNSQTYVRESSNITFNRLNILIENKSIGQGVGSTSIRDGSTNITIKNS NFYTENSGGYSTLVFAGVNCSTIENNTITAVGEVGNLLYLTTYNTNDYGIGMNSYNIIRNNRITGPSSASGICYAVCLTG HDNLILNNTIVYPGSGITIQWGYTGATVENTFINNTITGSFQASINSTVTGNNISGGVSSKGNTTFTNNTLGSISLVGND VVNNNIINGYVTISKSNNTVDNNLIKGDISASGTPTYNTITNNNYTGTIDSKLTNPANNNVVSDNNQVKFTEIIVEPSSV TVPIKTTTRLSLYVLSENNKVRSGTLIIKGENGNIIERASLDDKEIVEIDLLYDSIGVKTLNITYEGVDNYLSSSRLFNI IVIKQDPSIEVITTKSRIDDLTTFKAKFNAENVQGRVIFKVNGKILKDENGNIIFSTVTNNEAIVENIKVNSKWYTPHTT VTAIYSGNDMYNTSTKSVPFEVTQRESKIELEAQQATIGKTVTLKAKITDATNESITINNGQAIFKLNGRTLKDTNGNII YAKIVNGEAILDYTIPLTFKSGEYKLTCVFGHKIYERMDGNTTLTIVKE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 84238; Mature: 84238
Theoretical pI: Translated: 7.00; Mature: 7.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKNISCVFLLTTLILFLGLSVVCASDINSCAYDSVSDLEKVNNIKDNTVNKVTDNNDNN CCCCEEEHHHHHHHHHHHCCCEEECCCCCCCCCCCHHHHHHHCCCCCCCCCEECCCCCCC IKEIKKNTNNKKFTVSNLDNKRKETSNSKLETNNVENNTLKTVNKKNLKSSDSYTITNDS HHHHHHCCCCCEEEEECCCCCHHHCCCCEEECCCCCCCEEEECCCCCCCCCCCEEEECCC FSNYFSNKKLNDNIQDGSTLDFKGLFNGSKYSMTINRPVNLISSDKSAFIDLDGGEFVIE HHHHHCCCCCCCCCCCCCEEEEEEEECCCEEEEEECCCEEEEECCCCEEEEECCCEEEEE KTSHVNVTNITFHNSQTYVRESSNITFNRLNILIENKSIGQGVGSTSIRDGSTNITIKNS ECCEEEEEEEEEECCCEEEEECCCEEEEEEEEEEECCCCCCCCCCCEECCCCEEEEEECC NFYTENSGGYSTLVFAGVNCSTIENNTITAVGEVGNLLYLTTYNTNDYGIGMNSYNIIRN CEEEECCCCEEEEEEECCCCEEECCCEEEEEECCCCEEEEEEECCCCEECCCCCEEEEEC NRITGPSSASGICYAVCLTGHDNLILNNTIVYPGSGITIQWGYTGATVENTFINNTITGS CEECCCCCCCCEEEEEEEECCCCEEEECEEEECCCCEEEEECCCCCEEEEEEECCEEEEE FQASINSTVTGNNISGGVSSKGNTTFTNNTLGSISLVGNDVVNNNIINGYVTISKSNNTV EEEEECCEEECCCCCCCCCCCCCEEEECCCCEEEEEEECCCCCCCEEEEEEEEECCCCCC DNNLIKGDISASGTPTYNTITNNNYTGTIDSKLTNPANNNVVSDNNQVKFTEIIVEPSSV CCCEEEECCCCCCCCCEEEECCCCEEEEECCCCCCCCCCCEECCCCCEEEEEEEECCCCE TVPIKTTTRLSLYVLSENNKVRSGTLIIKGENGNIIERASLDDKEIVEIDLLYDSIGVKT EEEEEECCEEEEEEECCCCEEEEEEEEEECCCCCEEEECCCCCCCEEEEEEEEECCCEEE LNITYEGVDNYLSSSRLFNIIVIKQDPSIEVITTKSRIDDLTTFKAKFNAENVQGRVIFK EEEEECCHHHHHCCCCEEEEEEEECCCCEEEEEEHHHCCCEEEEEEEECCCCCCEEEEEE VNGKILKDENGNIIFSTVTNNEAIVENIKVNSKWYTPHTTVTAIYSGNDMYNTSTKSVPF ECCEEEEECCCCEEEEEECCCCEEEEEEEECCEEECCCCEEEEEEECCEEECCCCCCCCE EVTQRESKIELEAQQATIGKTVTLKAKITDATNESITINNGQAIFKLNGRTLKDTNGNII EEECCCCEEEEEEEEEECCEEEEEEEEEECCCCCEEEEECCEEEEEECCEEEECCCCCEE YAKIVNGEAILDYTIPLTFKSGEYKLTCVFGHKIYERMDGNTTLTIVKE EEEEECCCEEEEEEEEEEEECCCEEEEEEECCHHHHHCCCCEEEEEEEC >Mature Secondary Structure MNKNISCVFLLTTLILFLGLSVVCASDINSCAYDSVSDLEKVNNIKDNTVNKVTDNNDNN CCCCEEEHHHHHHHHHHHCCCEEECCCCCCCCCCCHHHHHHHCCCCCCCCCEECCCCCCC IKEIKKNTNNKKFTVSNLDNKRKETSNSKLETNNVENNTLKTVNKKNLKSSDSYTITNDS HHHHHHCCCCCEEEEECCCCCHHHCCCCEEECCCCCCCEEEECCCCCCCCCCCEEEECCC FSNYFSNKKLNDNIQDGSTLDFKGLFNGSKYSMTINRPVNLISSDKSAFIDLDGGEFVIE HHHHHCCCCCCCCCCCCCEEEEEEEECCCEEEEEECCCEEEEECCCCEEEEECCCEEEEE KTSHVNVTNITFHNSQTYVRESSNITFNRLNILIENKSIGQGVGSTSIRDGSTNITIKNS ECCEEEEEEEEEECCCEEEEECCCEEEEEEEEEEECCCCCCCCCCCEECCCCEEEEEECC NFYTENSGGYSTLVFAGVNCSTIENNTITAVGEVGNLLYLTTYNTNDYGIGMNSYNIIRN CEEEECCCCEEEEEEECCCCEEECCCEEEEEECCCCEEEEEEECCCCEECCCCCEEEEEC NRITGPSSASGICYAVCLTGHDNLILNNTIVYPGSGITIQWGYTGATVENTFINNTITGS CEECCCCCCCCEEEEEEEECCCCEEEECEEEECCCCEEEEECCCCCEEEEEEECCEEEEE FQASINSTVTGNNISGGVSSKGNTTFTNNTLGSISLVGNDVVNNNIINGYVTISKSNNTV EEEEECCEEECCCCCCCCCCCCCEEEECCCCEEEEEEECCCCCCCEEEEEEEEECCCCCC DNNLIKGDISASGTPTYNTITNNNYTGTIDSKLTNPANNNVVSDNNQVKFTEIIVEPSSV CCCEEEECCCCCCCCCEEEECCCCEEEEECCCCCCCCCCCEECCCCCEEEEEEEECCCCE TVPIKTTTRLSLYVLSENNKVRSGTLIIKGENGNIIERASLDDKEIVEIDLLYDSIGVKT EEEEEECCEEEEEEECCCCEEEEEEEEEECCCCCEEEECCCCCCCEEEEEEEEECCCEEE LNITYEGVDNYLSSSRLFNIIVIKQDPSIEVITTKSRIDDLTTFKAKFNAENVQGRVIFK EEEEECCHHHHHCCCCEEEEEEEECCCCEEEEEEHHHCCCEEEEEEEECCCCCCEEEEEE VNGKILKDENGNIIFSTVTNNEAIVENIKVNSKWYTPHTTVTAIYSGNDMYNTSTKSVPF ECCEEEEECCCCEEEEEECCCCEEEEEEEECCEEECCCCEEEEEEECCEEECCCCCCCCE EVTQRESKIELEAQQATIGKTVTLKAKITDATNESITINNGQAIFKLNGRTLKDTNGNII EEECCCCEEEEEEEEEECCEEEEEEEEEECCCCCEEEEECCEEEEEECCEEEECCCCCEE YAKIVNGEAILDYTIPLTFKSGEYKLTCVFGHKIYERMDGNTTLTIVKE EEEEECCCEEEEEEEEEEEECCCEEEEEEECCHHHHHCCCCEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA