| Definition | Methanosphaera stadtmanae DSM 3091 chromosome, complete genome. |
|---|---|
| Accession | NC_007681 |
| Length | 1,767,403 |
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The map label for this gene is birA [H]
Identifier: 84489714
GI number: 84489714
Start: 1048032
End: 1048607
Strand: Direct
Name: birA [H]
Synonym: Msp_0915
Alternate gene names: 84489714
Gene position: 1048032-1048607 (Clockwise)
Preceding gene: 84489678
Following gene: 84489717
Centisome position: 59.3
GC content: 30.03
Gene sequence:
>576_bases ATGACCATGATACTAAGACCTGAAGTATCACTAAAAGAAGCTTCAAAACTCACAATAGTAACAGGTGTTGCAATAGCAAA AACCTTACATGATGTATTTGATATTGATGTAGGTATTAAATGGCCTAATGACTTACTAATTGGAAATAAAAAGATTTGTG GAATATTAACAGAAGCTGTAACAGATTATGATGAAATCAAAGCAGTACTTGTAGGTATAGGAGTAGATGTTAACTTTGAT GAAGATAAACTTCCAGATAAACTAAAAGACGTTGCAACATCTGTTAAAGCAGAACTTGATACGGAATATAATAGGGCAGA AATAATAAAAGAATTCTTTAAAGTATTTGAAGAATTATATGAACAATATAAAAAACATGACTTCAAATATATTGTATCTG AGTGGAGAAGATTATCTACAACAACAGGTAATCGTGTGAAAGTATACACTGGACGAAAAGTAATTTATGCTGATGCAGTG GGTATTACAAATGAGGGTGCATTGATTATTGAACATGAAGATGGAAAATTAGAAAAAGTAATTTCTGGAGAAATAGAAAT AATAGATGATGAATAA
Upstream 100 bases:
>100_bases ACAAGATGCAAAAGAAGGAACTATAATCATAGCAGAAAGTCAAACAGCAGGAAGAACAAGAAAACATGATGGATGGGTAT CACCAGAAGGTGGTATTTAC
Downstream 100 bases:
>100_bases ATCATCATCCATATCCCCCACTATTTTTGTTAATTAATTATATAATACAGATTCATTTTTGTTAATTAATTATATAATAC AGATTCAAAGTCATTATTTT
Product: hypothetical protein
Products: NA
Alternate protein names: Biotin operon repressor; Biotin--[acetyl-CoA-carboxylase] synthetase; Biotin--protein ligase [H]
Number of amino acids: Translated: 191; Mature: 190
Protein sequence:
>191_residues MTMILRPEVSLKEASKLTIVTGVAIAKTLHDVFDIDVGIKWPNDLLIGNKKICGILTEAVTDYDEIKAVLVGIGVDVNFD EDKLPDKLKDVATSVKAELDTEYNRAEIIKEFFKVFEELYEQYKKHDFKYIVSEWRRLSTTTGNRVKVYTGRKVIYADAV GITNEGALIIEHEDGKLEKVISGEIEIIDDE
Sequences:
>Translated_191_residues MTMILRPEVSLKEASKLTIVTGVAIAKTLHDVFDIDVGIKWPNDLLIGNKKICGILTEAVTDYDEIKAVLVGIGVDVNFD EDKLPDKLKDVATSVKAELDTEYNRAEIIKEFFKVFEELYEQYKKHDFKYIVSEWRRLSTTTGNRVKVYTGRKVIYADAV GITNEGALIIEHEDGKLEKVISGEIEIIDDE >Mature_190_residues TMILRPEVSLKEASKLTIVTGVAIAKTLHDVFDIDVGIKWPNDLLIGNKKICGILTEAVTDYDEIKAVLVGIGVDVNFDE DKLPDKLKDVATSVKAELDTEYNRAEIIKEFFKVFEELYEQYKKHDFKYIVSEWRRLSTTTGNRVKVYTGRKVIYADAVG ITNEGALIIEHEDGKLEKVISGEIEIIDDE
Specific function: BirA acts both as a biotin-operon repressor and as the enzyme that synthesizes the corepressor, acetyl-CoA:carbon-dioxide ligase. This protein also activates biotin to form biotinyl-5'- adenylate and transfers the biotin moiety to biotin-accepting protein
COG id: COG0340
COG function: function code H; Biotin-(acetyl-CoA carboxylase) ligase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the biotin--protein ligase family [H]
Homologues:
Organism=Escherichia coli, GI1790408, Length=193, Percent_Identity=27.4611398963731, Blast_Score=74, Evalue=8e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: =6.3.4.15 [H]
Molecular weight: Translated: 21597; Mature: 21466
Theoretical pI: Translated: 4.58; Mature: 4.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTMILRPEVSLKEASKLTIVTGVAIAKTLHDVFDIDVGIKWPNDLLIGNKKICGILTEAV CEEEECCCCCCCCCCEEEEEHHHHHHHHHHHHHHCCCCCCCCCCEEECCCHHHHHHHHHH TDYDEIKAVLVGIGVDVNFDEDKLPDKLKDVATSVKAELDTEYNRAEIIKEFFKVFEELY CCHHHHHEEEEEECCCCCCCHHHCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH EQYKKHDFKYIVSEWRRLSTTTGNRVKVYTGRKVIYADAVGITNEGALIIEHEDGKLEKV HHHHHCCHHHHHHHHHHHCCCCCCEEEEEECCEEEEEECCCCCCCCEEEEEECCCCEEHH ISGEIEIIDDE HCCCEEEEECC >Mature Secondary Structure TMILRPEVSLKEASKLTIVTGVAIAKTLHDVFDIDVGIKWPNDLLIGNKKICGILTEAV EEEECCCCCCCCCCEEEEEHHHHHHHHHHHHHHCCCCCCCCCCEEECCCHHHHHHHHHH TDYDEIKAVLVGIGVDVNFDEDKLPDKLKDVATSVKAELDTEYNRAEIIKEFFKVFEELY CCHHHHHEEEEEECCCCCCCHHHCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH EQYKKHDFKYIVSEWRRLSTTTGNRVKVYTGRKVIYADAVGITNEGALIIEHEDGKLEKV HHHHHCCHHHHHHHHHHHCCCCCCEEEEEECCEEEEEECCCCCCCCEEEEEECCCCEEHH ISGEIEIIDDE HCCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7730294 [H]