| Definition | Methanosphaera stadtmanae DSM 3091 chromosome, complete genome. |
|---|---|
| Accession | NC_007681 |
| Length | 1,767,403 |
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The map label for this gene is 84489644
Identifier: 84489644
GI number: 84489644
Start: 979815
End: 980345
Strand: Direct
Name: 84489644
Synonym: Msp_0844
Alternate gene names: NA
Gene position: 979815-980345 (Clockwise)
Preceding gene: 84489636
Following gene: 84489645
Centisome position: 55.44
GC content: 28.63
Gene sequence:
>531_bases ATGAAAGTATTAGGAGTTGTAGGAAGTCCTAGAAAAGATGGTAATTGTGATGTTTTAGTAAAAGAATTTTTAGATGCTGC TGATGCAGATACAGAATATATCTTTTTAAATCATAAAAAGTTATTTGGATGTAATGCATGTATGGCTTGTGAAAATGGTG ATTGTGTTATTGATGATGATGGTAATGATATTATTAAATCATTGTTAGATGCTGATGTTTTAGTATTTGCAACACCTATA TATTATGGTCAAATGTCTGCTCAGGCTAAAGCATTTGTTGATAGATTCTACCAAATTTCTAGAAATGAAAATAAATCACT TGAAGGTAAAAAAGTTGTAACTATCTTTACACAAGCTCAACCTGAAAATGTATTTGGTGATTATATTGATTCATTTAAAG TAATGCCTTTTGGATATATGGGTATGGAAGTTATTGGTAATGTTACTGCTATGGGTACTTCATCTAAAGGAGATAAAGAA GAATTAGCTAAATATATTGATGAAGTAAAAAGTATTGCTTCAAAATTATAA
Upstream 100 bases:
>100_bases TTATTTATGAATTTTCATGTATGGTTTTATTATATTATAAATACAAATATAATAATACAATACTGATTTATGTATTAATA TAATAAGGAGGATAATAGTT
Downstream 100 bases:
>100_bases TCTCTCTTCTCTTTTTTTATTTTTTTTTTATTTGTGTTATTTTATATTAAATATTTATGTTTGTTAGGAGGAAACTTTTT TTGATAGAGAAAATTAAATT
Product: multimeric flavodoxin
Products: NA
Alternate protein names: Isf-2; MCJ-2; Mj2 [H]
Number of amino acids: Translated: 176; Mature: 176
Protein sequence:
>176_residues MKVLGVVGSPRKDGNCDVLVKEFLDAADADTEYIFLNHKKLFGCNACMACENGDCVIDDDGNDIIKSLLDADVLVFATPI YYGQMSAQAKAFVDRFYQISRNENKSLEGKKVVTIFTQAQPENVFGDYIDSFKVMPFGYMGMEVIGNVTAMGTSSKGDKE ELAKYIDEVKSIASKL
Sequences:
>Translated_176_residues MKVLGVVGSPRKDGNCDVLVKEFLDAADADTEYIFLNHKKLFGCNACMACENGDCVIDDDGNDIIKSLLDADVLVFATPI YYGQMSAQAKAFVDRFYQISRNENKSLEGKKVVTIFTQAQPENVFGDYIDSFKVMPFGYMGMEVIGNVTAMGTSSKGDKE ELAKYIDEVKSIASKL >Mature_176_residues MKVLGVVGSPRKDGNCDVLVKEFLDAADADTEYIFLNHKKLFGCNACMACENGDCVIDDDGNDIIKSLLDADVLVFATPI YYGQMSAQAKAFVDRFYQISRNENKSLEGKKVVTIFTQAQPENVFGDYIDSFKVMPFGYMGMEVIGNVTAMGTSSKGDKE ELAKYIDEVKSIASKL
Specific function: Redox-active protein probably involved in electron transport [H]
COG id: COG0655
COG function: function code R; Multimeric flavodoxin WrbA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ssuE family. Isf subfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005025 [H]
Pfam domain/function: PF03358 FMN_red [H]
EC number: NA
Molecular weight: Translated: 19373; Mature: 19373
Theoretical pI: Translated: 4.44; Mature: 4.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 6.8 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 6.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKVLGVVGSPRKDGNCDVLVKEFLDAADADTEYIFLNHKKLFGCNACMACENGDCVIDDD CEEECCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEECCEEECCCEEEEECCCCEEEECC GNDIIKSLLDADVLVFATPIYYGQMSAQAKAFVDRFYQISRNENKSLEGKKVVTIFTQAQ CHHHHHHHHCCCEEEEECHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCC PENVFGDYIDSFKVMPFGYMGMEVIGNVTAMGTSSKGDKEELAKYIDEVKSIASKL CCHHHHHHHHCEECCCCCHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MKVLGVVGSPRKDGNCDVLVKEFLDAADADTEYIFLNHKKLFGCNACMACENGDCVIDDD CEEECCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEECCEEECCCEEEEECCCCEEEECC GNDIIKSLLDADVLVFATPIYYGQMSAQAKAFVDRFYQISRNENKSLEGKKVVTIFTQAQ CHHHHHHHHCCCEEEEECHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCC PENVFGDYIDSFKVMPFGYMGMEVIGNVTAMGTSSKGDKEELAKYIDEVKSIASKL CCHHHHHHHHCEECCCCCHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]