| Definition | Methanosphaera stadtmanae DSM 3091 chromosome, complete genome. |
|---|---|
| Accession | NC_007681 |
| Length | 1,767,403 |
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The map label for this gene is 84489635
Identifier: 84489635
GI number: 84489635
Start: 966405
End: 968588
Strand: Direct
Name: 84489635
Synonym: Msp_0835
Alternate gene names: NA
Gene position: 966405-968588 (Clockwise)
Preceding gene: 84489630
Following gene: 84489636
Centisome position: 54.68
GC content: 25.82
Gene sequence:
>2184_bases ATGAAAAATAAAACTATTATTTTCTCAATTATTATAATTATTTCATTAATTAGTCTAAGTACTCTTTCTGCAACAAACAT TGACTCTACTGACACACCTATTCATGAAAAACAAACAAACACCCAACAAGTTAACATAAAACTTCCAACTAATAAAATCA TTGAAGAAACAACAAATGTTAATAAAAAAGATATAGTAAAGAAAAATAAAACCACAAAAAAACAAATAAATAAAACCCAT TCAATAAATAAAACAAAAAAAGATAACAATAAAACTCAAACAATTAAAACAAAAACTAACATTACAAAATCATACAATGA TTCTCTTAAAAATTCAGCATGTTGTTCTGTAGTAATACAAGTATCTGACAAGGAATCTATCATATCATTTAGACGTGATT CATCATATCGTGCAACAATAACCATTGAAAAAACAAAATGGTATGGTACTAACATAACACGTCAATTAAAAACACAGAAT GGATACTTCACCCATGTTATTGTTACACAAGATGGTTGGGTAATGGGATTTGGTGGAAGTGACAAAATAAAAACACAAGC AGATATTGTTAAAACTGCAGGAGAAATGTATTCTAAAAGAAATATATCATACAGTGGTATGAGTAAAATATTTAATCTAC TAAAAACATTAAATATTGGACATACTGTCATTAAATCTCCAAATGGAACAGTAGGTGTTGCAGCATATAATTCTGGTGGA AAATATCTGATAACCAAAATAAATAATGGTGGTTATGTATGTATTCCAAACAATTTCAAATACTATCATACTGGTAGCTA TTCAAAATATGCACAAAATTCAATAGATGCAGCTATTCAAATTGCAGGACATGATGTTTATGGTATTAACAGACGAAATA TTATAACATACCATAGTACAATTTCATCAAATAATCAAAAACTAAATGTTTATGTAACAAATGATGATGGTAGATATGTT TCAAAATCAACATATAATCTAAAAGATCCAATAAATTTTATTGGAAAAACTATTGATACAAGTCAAATACCAAGAATTCC AAATAAGAAATTCATAGGCTCAATTGAATATAAATCACCAACACCACCAATACCATCCACATATATTATAACAAATAATG CTAAATATAATAACAATATTTATAATGTATTTAATCGTATAAACAAGTATGCTAACAGTAACAATGTATATAATCTAAAC TTTAAAAAAGGCATATACTACTTTGATGGTATAGAAAATAACACTCTTAAAATAGGAAATAAGAATATAAAAAATGTTAC AATAATTATGAATGGAAATAACAGTATTTTCAGTGGTAAAGATAAAACAAGAATAATAGATATAGTTTCAAATTTCAATG TGATTATTAAAAATATTTCATTTGTAAATGGAAATAGTACTAATGGTGGAGCTATATCTAACAATGGAAATCTTTCAATA GTATCATGTGTATTTAAAAATAACAAAGCATCAAATGGAGGGGCAATATATAATCATGGTATATTAAATGTTGATTCATC AGTATTTACATATAACACGGGAATAGTTGCTAAATCAATCTACAATAATGGAAGTATTATATCAATTAACAATAACTGGT GGGGATTAAATAATCCTGATTGGAGTAAGTTACTCTATAATATGAAAAAACCTGATACATATGTTGTTATGAAATTTACT AATGTAACTTCATACTATGATTCTGAGATGATGTTTAAAGCAACACTCAATCAACTAAATAATCATAAAACAATTACAAC TATTCCAATAAGAGAAATTAAATTATACAGTAGTCTAAGTAATGTTCAATTTAAAATTAAAATTAATCAGAAAGCAATAT TTTCATATTGTGCACCTCCAGCAACTGTTAAAGTTAAAATTGATGAACAGGAAATGGCTTATACTATAAATAAAATTAAC TTAAAAGTTTCACTTATAGGTTCAGATAAAATACAGATAAAAGTTACAGATAGATATAACAAAACAGTGCCCATAGGTAA TGTTGTAGTTAATATAAATGGTAAGAACATAGTTGAAAAAACAGCACTTTTCAATGTTACAAATGGTGTTACACATGTAA CAATTCCATCTTCAATAAGAAGTTCAAAGTACACTGTTACCACAACATATCTTCAAAATAATATATATCCTCAAACATCA ACTAAAACAACACTAATGGTGTAA
Upstream 100 bases:
>100_bases GTTATAATAAATTACATTAGATATAAAAATAAAATCTATATTAAATAAACTTTAAAAAAAATATCAAGTTTATAAAAAAA ATATTAATTGAAGTGTAAAC
Downstream 100 bases:
>100_bases TTACCTACACCTACCTTTTTTTTAAAATTATTAATTAAATAAAATTATTCTAAAAAAAACATGTGTCTATACTTATTAAT GCTTATTTCATATAATCTAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 727; Mature: 727
Protein sequence:
>727_residues MKNKTIIFSIIIIISLISLSTLSATNIDSTDTPIHEKQTNTQQVNIKLPTNKIIEETTNVNKKDIVKKNKTTKKQINKTH SINKTKKDNNKTQTIKTKTNITKSYNDSLKNSACCSVVIQVSDKESIISFRRDSSYRATITIEKTKWYGTNITRQLKTQN GYFTHVIVTQDGWVMGFGGSDKIKTQADIVKTAGEMYSKRNISYSGMSKIFNLLKTLNIGHTVIKSPNGTVGVAAYNSGG KYLITKINNGGYVCIPNNFKYYHTGSYSKYAQNSIDAAIQIAGHDVYGINRRNIITYHSTISSNNQKLNVYVTNDDGRYV SKSTYNLKDPINFIGKTIDTSQIPRIPNKKFIGSIEYKSPTPPIPSTYIITNNAKYNNNIYNVFNRINKYANSNNVYNLN FKKGIYYFDGIENNTLKIGNKNIKNVTIIMNGNNSIFSGKDKTRIIDIVSNFNVIIKNISFVNGNSTNGGAISNNGNLSI VSCVFKNNKASNGGAIYNHGILNVDSSVFTYNTGIVAKSIYNNGSIISINNNWWGLNNPDWSKLLYNMKKPDTYVVMKFT NVTSYYDSEMMFKATLNQLNNHKTITTIPIREIKLYSSLSNVQFKIKINQKAIFSYCAPPATVKVKIDEQEMAYTINKIN LKVSLIGSDKIQIKVTDRYNKTVPIGNVVVNINGKNIVEKTALFNVTNGVTHVTIPSSIRSSKYTVTTTYLQNNIYPQTS TKTTLMV
Sequences:
>Translated_727_residues MKNKTIIFSIIIIISLISLSTLSATNIDSTDTPIHEKQTNTQQVNIKLPTNKIIEETTNVNKKDIVKKNKTTKKQINKTH SINKTKKDNNKTQTIKTKTNITKSYNDSLKNSACCSVVIQVSDKESIISFRRDSSYRATITIEKTKWYGTNITRQLKTQN GYFTHVIVTQDGWVMGFGGSDKIKTQADIVKTAGEMYSKRNISYSGMSKIFNLLKTLNIGHTVIKSPNGTVGVAAYNSGG KYLITKINNGGYVCIPNNFKYYHTGSYSKYAQNSIDAAIQIAGHDVYGINRRNIITYHSTISSNNQKLNVYVTNDDGRYV SKSTYNLKDPINFIGKTIDTSQIPRIPNKKFIGSIEYKSPTPPIPSTYIITNNAKYNNNIYNVFNRINKYANSNNVYNLN FKKGIYYFDGIENNTLKIGNKNIKNVTIIMNGNNSIFSGKDKTRIIDIVSNFNVIIKNISFVNGNSTNGGAISNNGNLSI VSCVFKNNKASNGGAIYNHGILNVDSSVFTYNTGIVAKSIYNNGSIISINNNWWGLNNPDWSKLLYNMKKPDTYVVMKFT NVTSYYDSEMMFKATLNQLNNHKTITTIPIREIKLYSSLSNVQFKIKINQKAIFSYCAPPATVKVKIDEQEMAYTINKIN LKVSLIGSDKIQIKVTDRYNKTVPIGNVVVNINGKNIVEKTALFNVTNGVTHVTIPSSIRSSKYTVTTTYLQNNIYPQTS TKTTLMV >Mature_727_residues MKNKTIIFSIIIIISLISLSTLSATNIDSTDTPIHEKQTNTQQVNIKLPTNKIIEETTNVNKKDIVKKNKTTKKQINKTH SINKTKKDNNKTQTIKTKTNITKSYNDSLKNSACCSVVIQVSDKESIISFRRDSSYRATITIEKTKWYGTNITRQLKTQN GYFTHVIVTQDGWVMGFGGSDKIKTQADIVKTAGEMYSKRNISYSGMSKIFNLLKTLNIGHTVIKSPNGTVGVAAYNSGG KYLITKINNGGYVCIPNNFKYYHTGSYSKYAQNSIDAAIQIAGHDVYGINRRNIITYHSTISSNNQKLNVYVTNDDGRYV SKSTYNLKDPINFIGKTIDTSQIPRIPNKKFIGSIEYKSPTPPIPSTYIITNNAKYNNNIYNVFNRINKYANSNNVYNLN FKKGIYYFDGIENNTLKIGNKNIKNVTIIMNGNNSIFSGKDKTRIIDIVSNFNVIIKNISFVNGNSTNGGAISNNGNLSI VSCVFKNNKASNGGAIYNHGILNVDSSVFTYNTGIVAKSIYNNGSIISINNNWWGLNNPDWSKLLYNMKKPDTYVVMKFT NVTSYYDSEMMFKATLNQLNNHKTITTIPIREIKLYSSLSNVQFKIKINQKAIFSYCAPPATVKVKIDEQEMAYTINKIN LKVSLIGSDKIQIKVTDRYNKTVPIGNVVVNINGKNIVEKTALFNVTNGVTHVTIPSSIRSSKYTVTTTYLQNNIYPQTS TKTTLMV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 81463; Mature: 81463
Theoretical pI: Translated: 10.35; Mature: 10.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNKTIIFSIIIIISLISLSTLSATNIDSTDTPIHEKQTNTQQVNIKLPTNKIIEETTNV CCCCEEEHHHHHHHHHHHHHEEEECCCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHCCC NKKDIVKKNKTTKKQINKTHSINKTKKDNNKTQTIKTKTNITKSYNDSLKNSACCSVVIQ CHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCCCHHHHCCCCCEEEEEEE VSDKESIISFRRDSSYRATITIEKTKWYGTNITRQLKTQNGYFTHVIVTQDGWVMGFGGS ECCCHHHHEEECCCCEEEEEEEEEEEEECCCCEEEEECCCCEEEEEEEECCCEEEEECCC DKIKTQADIVKTAGEMYSKRNISYSGMSKIFNLLKTLNIGHTVIKSPNGTVGVAAYNSGG CCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCEEEEEECCCC KYLITKINNGGYVCIPNNFKYYHTGSYSKYAQNSIDAAIQIAGHDVYGINRRNIITYHST CEEEEEECCCCEEEECCCEEEEECCCCHHHHHCCCCEEEEEECCEEEECCCCEEEEEEEE ISSNNQKLNVYVTNDDGRYVSKSTYNLKDPINFIGKTIDTSQIPRIPNKKFIGSIEYKSP ECCCCCEEEEEEECCCCCEEECCCCCCCCCHHHHCCCCCCCCCCCCCCCCEEEEEECCCC TPPIPSTYIITNNAKYNNNIYNVFNRINKYANSNNVYNLNFKKGIYYFDGIENNTLKIGN CCCCCEEEEEECCCEECCCHHHHHHHHHHHCCCCCEEEEEECCCEEEECCCCCCEEEECC KNIKNVTIIMNGNNSIFSGKDKTRIIDIVSNFNVIIKNISFVNGNSTNGGAISNNGNLSI CCCCEEEEEECCCCCEECCCCCEEEEEEECCCEEEEEEEEEECCCCCCCCEEECCCCEEE VSCVFKNNKASNGGAIYNHGILNVDSSVFTYNTGIVAKSIYNNGSIISINNNWWGLNNPD EEEEEECCCCCCCCEEEECCEEEECCCEEEEECCEEEEEEECCCCEEEECCCCCCCCCCC WSKLLYNMKKPDTYVVMKFTNVTSYYDSEMMFKATLNQLNNHKTITTIPIREIKLYSSLS HHHHHCCCCCCCEEEEEEEECCCEECCCHHHHHHHHHHHCCCCEEEEEEHHEEEEEECCC NVQFKIKINQKAIFSYCAPPATVKVKIDEQEMAYTINKINLKVSLIGSDKIQIKVTDRYN CEEEEEEECCEEEEEECCCCEEEEEEECCHHEEEEEEEEEEEEEEEECCEEEEEEECCCC KTVPIGNVVVNINGKNIVEKTALFNVTNGVTHVTIPSSIRSSKYTVTTTYLQNNIYPQTS CEEEECEEEEEECCCCEEEEEEEEEECCCEEEEEECCCCCCCEEEEEEEEEECCCCCCCC TKTTLMV CCEEEEC >Mature Secondary Structure MKNKTIIFSIIIIISLISLSTLSATNIDSTDTPIHEKQTNTQQVNIKLPTNKIIEETTNV CCCCEEEHHHHHHHHHHHHHEEEECCCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHCCC NKKDIVKKNKTTKKQINKTHSINKTKKDNNKTQTIKTKTNITKSYNDSLKNSACCSVVIQ CHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCCCHHHHCCCCCEEEEEEE VSDKESIISFRRDSSYRATITIEKTKWYGTNITRQLKTQNGYFTHVIVTQDGWVMGFGGS ECCCHHHHEEECCCCEEEEEEEEEEEEECCCCEEEEECCCCEEEEEEEECCCEEEEECCC DKIKTQADIVKTAGEMYSKRNISYSGMSKIFNLLKTLNIGHTVIKSPNGTVGVAAYNSGG CCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCEEEEEECCCC KYLITKINNGGYVCIPNNFKYYHTGSYSKYAQNSIDAAIQIAGHDVYGINRRNIITYHST CEEEEEECCCCEEEECCCEEEEECCCCHHHHHCCCCEEEEEECCEEEECCCCEEEEEEEE ISSNNQKLNVYVTNDDGRYVSKSTYNLKDPINFIGKTIDTSQIPRIPNKKFIGSIEYKSP ECCCCCEEEEEEECCCCCEEECCCCCCCCCHHHHCCCCCCCCCCCCCCCCEEEEEECCCC TPPIPSTYIITNNAKYNNNIYNVFNRINKYANSNNVYNLNFKKGIYYFDGIENNTLKIGN CCCCCEEEEEECCCEECCCHHHHHHHHHHHCCCCCEEEEEECCCEEEECCCCCCEEEECC KNIKNVTIIMNGNNSIFSGKDKTRIIDIVSNFNVIIKNISFVNGNSTNGGAISNNGNLSI CCCCEEEEEECCCCCEECCCCCEEEEEEECCCEEEEEEEEEECCCCCCCCEEECCCCEEE VSCVFKNNKASNGGAIYNHGILNVDSSVFTYNTGIVAKSIYNNGSIISINNNWWGLNNPD EEEEEECCCCCCCCEEEECCEEEECCCEEEEECCEEEEEEECCCCEEEECCCCCCCCCCC WSKLLYNMKKPDTYVVMKFTNVTSYYDSEMMFKATLNQLNNHKTITTIPIREIKLYSSLS HHHHHCCCCCCCEEEEEEEECCCEECCCHHHHHHHHHHHCCCCEEEEEEHHEEEEEECCC NVQFKIKINQKAIFSYCAPPATVKVKIDEQEMAYTINKINLKVSLIGSDKIQIKVTDRYN CEEEEEEECCEEEEEECCCCEEEEEEECCHHEEEEEEEEEEEEEEEECCEEEEEEECCCC KTVPIGNVVVNINGKNIVEKTALFNVTNGVTHVTIPSSIRSSKYTVTTTYLQNNIYPQTS CEEEECEEEEEECCCCEEEEEEEEEECCCEEEEEECCCCCCCEEEEEEEEEECCCCCCCC TKTTLMV CCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA