| Definition | Methanosphaera stadtmanae DSM 3091 chromosome, complete genome. |
|---|---|
| Accession | NC_007681 |
| Length | 1,767,403 |
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The map label for this gene is trkG [H]
Identifier: 84489630
GI number: 84489630
Start: 961978
End: 963480
Strand: Direct
Name: trkG [H]
Synonym: Msp_0830
Alternate gene names: 84489630
Gene position: 961978-963480 (Clockwise)
Preceding gene: 84489629
Following gene: 84489635
Centisome position: 54.43
GC content: 29.01
Gene sequence:
>1503_bases ATGAACTCATTTACTATAAATAAAATAAAAACAAATGAACTTAAAACAATTGGTCATTATACTGGCTATGTATGTATAGT TATTGGACTATTTATGATAATTCCAATAATATGTGCAATAATATTTCATGATGAAGTAAAATACTTGAATTCATTTGTAT CTTCTTCAATTATATGTGTAGCAATTGGATTTTTATTATGGGTTGGTTTTAGTAAAAAAAACTTAACACACCTATCCTTA AAAGGATCCCTAATTTTTGTTCTGAGTATATGGGGACTAACAGCATTAGCAGCAGGTCTTCCATATGTCATTTCTGGAGA TTTAAATATACTCGATGCTTTTTTTGAAGGAATGTCTGGTATTACAACAACAGGATTTTCTCTCCTTCCACCATGTGAAC ATCCATTTTCTGTTGCAATATGGGCTTCATTAACACAATGGCTTGGAGGATTAGGTATCATAGTTTTATTACTTGTTGTT GTTCCATCATCTGTGAGTTTAAAAAGATTATACTTTGCAGAGGGAAGAACAGAACAAATGACACCTAATATAAAACATAC AACAATAATCTTTATAAAATTATATTTACTATTAACATCAATTGGAATTATATTATACCTACTAGCAGGACTAAATCTAT TTGATGCAATATGTTATTGTTTCTGTGGAATTGCAACAGGTGGTTTTTCTGTACATCCAGCAAGTGTACAATACTTTCAA ACACCAATTATACAACTTATAACAATGTGTATTATGATATTAGGTGGTTTAAACTTTGTAGTAATATATCGTGTTATTAA AGGTGCATGGAGAAATCTTTACAAAGACATTGAAATTAAAGCATTTGCATTTCTTGTAATATCTTCAACATTACTTATTG GATTATCATTATATTTCCAAGGATTCTACAATCACGATATATTAATTATACTTAGACATTCACTATTTCAAGTTGTGTCA GTTATTACATCAACAGGTTTTTCCAGTACAAGTATTGATAATTGGTCACCACTTTGTTATACAGTTCTGATATTATTAAT GTTTACTGGAAGTTCCATATGTTCTACTAGTGGAGGAATTAAGCTATATAATATAGTTATACTCTTTAAAGCAATATGGT GGGAAGTTAAAAGTATGATACTTCCAAAAAATACCATTATAATTAAAAAAGTATTCCATGATAATAAGTACCGTGATGTA TCAGATAAAACTATAAAAACAATACTCATCTATGTAATATCATACATTCTTATATTCATAGCGAGTTTTATAGTAATAGC AATCTTTTGTAATGACTTCCAGATAGCATTTACAATTACAGCTTCATCCCTTGGTAATACTGGACTTGCACCAACATATC TTTCAGTATCAACACCACTTATTGTGAAAATTGTTATGATTATAGATTTCTGGGCAGGTAGGATTGGAGTATGGCCATTA TTACTATCAATAGTATATACAACCAACATAATTCAAGGAAAAATAGAAGAACATAGAGAATAA
Upstream 100 bases:
>100_bases AAATCTTTTTTTTATACTTTTTTTATTATATTTATCTGATAAACTTTTAAATATTAAAAATATCAATATTAATATGTACA AAATTTAAGGATAGTAACAA
Downstream 100 bases:
>100_bases AAATAGCAGATTATATAATAAAAAGGAGATGATGAAACTCCTTTTTATGAACTTTTTTTAAAATAAATTTAAGTTATTTC TTTATCATTTACTTCACGTT
Product: Trk-type potassium transport system, membrane protein
Products: Proton [Cytoplasm]; K (I) [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 500; Mature: 500
Protein sequence:
>500_residues MNSFTINKIKTNELKTIGHYTGYVCIVIGLFMIIPIICAIIFHDEVKYLNSFVSSSIICVAIGFLLWVGFSKKNLTHLSL KGSLIFVLSIWGLTALAAGLPYVISGDLNILDAFFEGMSGITTTGFSLLPPCEHPFSVAIWASLTQWLGGLGIIVLLLVV VPSSVSLKRLYFAEGRTEQMTPNIKHTTIIFIKLYLLLTSIGIILYLLAGLNLFDAICYCFCGIATGGFSVHPASVQYFQ TPIIQLITMCIMILGGLNFVVIYRVIKGAWRNLYKDIEIKAFAFLVISSTLLIGLSLYFQGFYNHDILIILRHSLFQVVS VITSTGFSSTSIDNWSPLCYTVLILLMFTGSSICSTSGGIKLYNIVILFKAIWWEVKSMILPKNTIIIKKVFHDNKYRDV SDKTIKTILIYVISYILIFIASFIVIAIFCNDFQIAFTITASSLGNTGLAPTYLSVSTPLIVKIVMIIDFWAGRIGVWPL LLSIVYTTNIIQGKIEEHRE
Sequences:
>Translated_500_residues MNSFTINKIKTNELKTIGHYTGYVCIVIGLFMIIPIICAIIFHDEVKYLNSFVSSSIICVAIGFLLWVGFSKKNLTHLSL KGSLIFVLSIWGLTALAAGLPYVISGDLNILDAFFEGMSGITTTGFSLLPPCEHPFSVAIWASLTQWLGGLGIIVLLLVV VPSSVSLKRLYFAEGRTEQMTPNIKHTTIIFIKLYLLLTSIGIILYLLAGLNLFDAICYCFCGIATGGFSVHPASVQYFQ TPIIQLITMCIMILGGLNFVVIYRVIKGAWRNLYKDIEIKAFAFLVISSTLLIGLSLYFQGFYNHDILIILRHSLFQVVS VITSTGFSSTSIDNWSPLCYTVLILLMFTGSSICSTSGGIKLYNIVILFKAIWWEVKSMILPKNTIIIKKVFHDNKYRDV SDKTIKTILIYVISYILIFIASFIVIAIFCNDFQIAFTITASSLGNTGLAPTYLSVSTPLIVKIVMIIDFWAGRIGVWPL LLSIVYTTNIIQGKIEEHRE >Mature_500_residues MNSFTINKIKTNELKTIGHYTGYVCIVIGLFMIIPIICAIIFHDEVKYLNSFVSSSIICVAIGFLLWVGFSKKNLTHLSL KGSLIFVLSIWGLTALAAGLPYVISGDLNILDAFFEGMSGITTTGFSLLPPCEHPFSVAIWASLTQWLGGLGIIVLLLVV VPSSVSLKRLYFAEGRTEQMTPNIKHTTIIFIKLYLLLTSIGIILYLLAGLNLFDAICYCFCGIATGGFSVHPASVQYFQ TPIIQLITMCIMILGGLNFVVIYRVIKGAWRNLYKDIEIKAFAFLVISSTLLIGLSLYFQGFYNHDILIILRHSLFQVVS VITSTGFSSTSIDNWSPLCYTVLILLMFTGSSICSTSGGIKLYNIVILFKAIWWEVKSMILPKNTIIIKKVFHDNKYRDV SDKTIKTILIYVISYILIFIASFIVIAIFCNDFQIAFTITASSLGNTGLAPTYLSVSTPLIVKIVMIIDFWAGRIGVWPL LLSIVYTTNIIQGKIEEHRE
Specific function: Low-affinity potassium transport system. Interacts with trk system potassium uptake protein trkA. TrkE increases the affinity of the system [H]
COG id: COG0168
COG function: function code P; Trk-type K+ transport systems, membrane components
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the trkH potassium transport family [H]
Homologues:
Organism=Escherichia coli, GI1787626, Length=487, Percent_Identity=26.8993839835729, Blast_Score=167, Evalue=1e-42, Organism=Escherichia coli, GI48994987, Length=486, Percent_Identity=31.6872427983539, Blast_Score=167, Evalue=2e-42,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003445 - InterPro: IPR004772 [H]
Pfam domain/function: PF02386 TrkH [H]
EC number: NA
Molecular weight: Translated: 55608; Mature: 55608
Theoretical pI: Translated: 8.79; Mature: 8.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNSFTINKIKTNELKTIGHYTGYVCIVIGLFMIIPIICAIIFHDEVKYLNSFVSSSIICV CCCCEECCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AIGFLLWVGFSKKNLTHLSLKGSLIFVLSIWGLTALAAGLPYVISGDLNILDAFFEGMSG HHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHCCCC ITTTGFSLLPPCEHPFSVAIWASLTQWLGGLGIIVLLLVVVPSSVSLKRLYFAEGRTEQM CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHEECCCCCCCC TPNIKHTTIIFIKLYLLLTSIGIILYLLAGLNLFDAICYCFCGIATGGFSVHPASVQYFQ CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCEECCCHHHHHH TPIIQLITMCIMILGGLNFVVIYRVIKGAWRNLYKDIEIKAFAFLVISSTLLIGLSLYFQ HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH GFYNHDILIILRHSLFQVVSVITSTGFSSTSIDNWSPLCYTVLILLMFTGSSICSTSGGI HHCCCCCEEHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHCCCCCC KLYNIVILFKAIWWEVKSMILPKNTIIIKKVFHDNKYRDVSDKTIKTILIYVISYILIFI HHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHH ASFIVIAIFCNDFQIAFTITASSLGNTGLAPTYLSVSTPLIVKIVMIIDFWAGRIGVWPL HHHHHHHHHHCCEEEEEEEEECCCCCCCCCCCEEECCCHHHHHHHHHHHHHCCHHHHHHH LLSIVYTTNIIQGKIEEHRE HHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MNSFTINKIKTNELKTIGHYTGYVCIVIGLFMIIPIICAIIFHDEVKYLNSFVSSSIICV CCCCEECCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AIGFLLWVGFSKKNLTHLSLKGSLIFVLSIWGLTALAAGLPYVISGDLNILDAFFEGMSG HHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHCCCC ITTTGFSLLPPCEHPFSVAIWASLTQWLGGLGIIVLLLVVVPSSVSLKRLYFAEGRTEQM CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHEECCCCCCCC TPNIKHTTIIFIKLYLLLTSIGIILYLLAGLNLFDAICYCFCGIATGGFSVHPASVQYFQ CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCEECCCHHHHHH TPIIQLITMCIMILGGLNFVVIYRVIKGAWRNLYKDIEIKAFAFLVISSTLLIGLSLYFQ HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH GFYNHDILIILRHSLFQVVSVITSTGFSSTSIDNWSPLCYTVLILLMFTGSSICSTSGGI HHCCCCCEEHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHCCCCCC KLYNIVILFKAIWWEVKSMILPKNTIIIKKVFHDNKYRDVSDKTIKTILIYVISYILIFI HHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHH ASFIVIAIFCNDFQIAFTITASSLGNTGLAPTYLSVSTPLIVKIVMIIDFWAGRIGVWPL HHHHHHHHHHCCEEEEEEEEECCCCCCCCCCCEEECCCHHHHHHHHHHHHHCCHHHHHHH LLSIVYTTNIIQGKIEEHRE HHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Proton [Periplasm]; K (I) [Periplasm] [C]
Specific reaction: Proton [Periplasm] + K (I) [Periplasm] = Proton [Cytoplasm] + K (I) [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 2022616; 9097039; 9278503 [H]